EWM30279.1, cds451 (CDS) Nannochloropsis gaditana

Overview
NameEWM30279.1
Unique Namecds451
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1123639..1124448 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30279.1
Productmethyltransferase type 11
Orig transcript idgnl|cribi|Naga_100003g30.1796.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1123639..1124448 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|585112938|gb|EWM30279.1| (methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query:    1 MQEDGPRHTVPVHRGGKGRMTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 269
            MQEDGPRHTVPVHRGGKGRMTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ
Sbjct:    1 MQEDGPRHTVPVHRGGKGRMTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 269          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|553194177|ref|XP_005855899.1| (methyltransferase type 11 [Nannochloropsis gaditana CCMP526] >gi|422293162|gb|EKU20462.1| methyltransferase type 11 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 514.998 bits (1325), Expect = 0.000e+0
Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 0
Query:   20 MTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 269
            MTS IKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWS+ALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ
Sbjct:    1 MTSSIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSVALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 250          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|923136334|ref|XP_013761632.1| (methyltransferase type 11 [Thecamonas trahens ATCC 50062] >gi|906561489|gb|KNC54732.1| methyltransferase type 11 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 152.14 bits (383), Expect = 1.459e-41
Identity = 87/243 (35.80%), Postives = 130/243 (53.50%), Query Frame = 0
Query:   24 IKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEH-----SGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVK 261
            + ++  + F+   ++    G L  +   R   FAS C  +    PE  A+RC+++ +  G VLE+GPGP  N+ C+     +T++TG+EPN      F    A  +     +++ ++G       +G+ D   DT V THVLCSV + +QVLAE  RVLKPGG++FFLEH+ +     + F Q+ I P+W I  DGC+F      LE     G    ++   FFDAP+ L I KPH+ G A K
Sbjct:    4 LTLLGRVAFMTLFAVICTAGVLHMHRPTRRWAFASFCVAMNKRSPEMRALRCEVVGNATGHVLEIGPGPGGNLACY--GPEVTAWTGVEPN----PEFAPYVAAAAAATERKIRLVDGVAEDLVAAGVADASIDTYVATHVLCSVDDVSQVLAEASRVLKPGGKLFFLEHVLAQDSPTLAFVQQAIAPLWRIFGDGCEFRTQWYELEAAAAAGLF-IDLEITFFDAPIKLVIAKPHIKGSATK 239          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|224009972|ref|XP_002293944.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970616|gb|EED88953.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 148.673 bits (374), Expect = 1.359e-38
Identity = 90/245 (36.73%), Postives = 131/245 (53.47%), Query Frame = 0
Query:   27 VSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCT--CLVSNQPEQHAIRCDLLK--DVRGDVLELGPGPATNMECFEGKT-SITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLP-DEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIAS-PPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMP--LAIVKPHLMGHAVKK 262
            VS+L  +    + + L  L  NPE R R F ++C    L  +  ++H  RC +L   +V G V+E G GP TN +C+E     +  Y  +EPN +  E  + +     L FPLE   L+GE   +  D  FD VV THVLCSV +   VLA  DR LKPGGR+ F+EH      G+ + + Q+   P+ +I  +GCKF D   ++E + +  +  FE+    FDAPMP  +   +PH+ G A K+
Sbjct:  163 VSFLISIALSGIGIFLFVLSVNPELRRRNFVNLCVGQNLKGSPLDEH--RCGILNEGNVTGRVMEFGAGPGTNFKCWENTNIQVEKYVVVEPNTYFEEKLQAEKQARGLEFPLEFVGLKGESVDIAEDGTFDVVVLTHVLCSVDSPEVVLANADRALKPGGRIIFMEHSKELREGTTVWYLQQVAAPILAIVGNGCKFLDMRSVIEGYLSNDR--FELEMLDFDAPMPKMMTFARPHVKGVATKR 403          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1060040813|ref|WP_069069469.1| (SAM-dependent methyltransferase [Nostoc sp. KVJ20] >gi|1059440959|gb|ODG98437.1| methyltransferase [Nostoc sp. KVJ20])

HSP 1 Score: 134.42 bits (337), Expect = 4.831e-35
Identity = 87/219 (39.73%), Postives = 121/219 (55.25%), Query Frame = 0
Query:   46 RQNPEFRHRWFASVCTCLVSNQPEQHAIRCD-LLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFE-VMYHFFDAPMPLAIVKPHLMGHAVKK 262
            + +P++  R FA +     +   E+ A R   L   + G+VLE+GPG   N+  +    S   + GIEPN F+H   + +   L+L   ++L++   EH  + D   D VV T VLCSV+N   VL EV RVLKPGGR FF+EH+A+P G+ +R  Q  I+P+W    DGC     HL  E +      GFE V Y  F A +P AIV P ++G AVKK
Sbjct:   12 KGSPDWYKRLFAWMMAHGNAKYEEEIADRKRALFAQLHGNVLEIGPGTGPNLSYY---PSDIHWIGIEPNPFMHPYLQQEAERLALD--IDLRSGTAEHLEVEDNSMDVVVSTLVLCSVNNLAAVLQEVIRVLKPGGRFFFVEHVAAPQGTMLRRIQHGIKPLWKTLGDGC-----HLDRETWLALENAGFEQVDYQHFRANLP-AIVSPQIIGVAVKK 219          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1121287750|ref|WP_073600352.1| (class I SAM-dependent methyltransferase [Hydrococcus rivularis] >gi|1115257400|gb|OKH21731.1| SAM-dependent methyltransferase [Hydrococcus rivularis NIES-593])

HSP 1 Score: 132.88 bits (333), Expect = 2.907e-34
Identity = 80/192 (41.67%), Postives = 105/192 (54.69%), Query Frame = 0
Query:   73 IRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCK-FPDTHLLLERFKNQGKEGFE-VMYHFFDAPMPLAIVKPHLMGHAVKK 262
            ++  L  D++G VLE+GPG   N+  +    S   + GIEPN F+H+  + +   L L   +EL+    E   + D   DTVV THVLCSV +    L E+ RVLKPGGR  F+EH+A+  G+W R  Q  IEPVW    D C    +T L LE      K GFE V Y  F+  +P  IV PH+ G A KK
Sbjct:   45 LKQSLFGDLQGRVLEIGPGAGANLSYY---PSDIHWIGIEPNPFMHQYLKQEAERLGLK-KIELRLGCAEQLDMEDNSIDTVVSTHVLCSVTDLATTLQEIGRVLKPGGRFLFIEHVAAECGTWTRRIQDGIEPVWKSIFDNCHPNRETWLALE------KAGFERVDYQDFNLSIP--IVSPHIAGIARKK 224          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|493039758|ref|WP_006105811.1| (SAM-dependent methyltransferase [Coleofasciculus chthonoplastes] >gi|196176263|gb|EDX71279.1| Methyltransferase domain family [Coleofasciculus chthonoplastes PCC 7420])

HSP 1 Score: 132.494 bits (332), Expect = 3.724e-34
Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = 0
Query:   65 SNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCK-FPDTHLLLERFKNQGKEGFE-VMYHFFDAPMPLAIVKPHLMGHAVK 261
            SN      ++  L  D++G V+E+GPG   N+  +   T I  + G+EPN F+H     +   + L   +++K+   E   + D   D VV T+VLCSV N +  + E+ R+LKPGGR  F+EH+A+  GSW R  Q +IEPVW    DGC+   +T L LE      K GFE + Y  F  P P  IV PH+ G A K
Sbjct:   37 SNHSTLAQLKQVLFADLQGKVVEIGPGAGANLAYY--PTDI-HWIGVEPNPFMHSYLEQEAQQVGLN-RIDIKSGSAERIDVDDNSVDAVVSTYVLCSVSNLSATVQEIRRILKPGGRFLFVEHVAAECGSWQRRIQGSIEPVWKTLFDGCRPNRETGLALE------KAGFENINYQQFQVPFP--IVSPHISGVATK 223          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|497316096|ref|WP_009630309.1| (methylase involved in ubiquinone/menaquinone biosynthesis [Synechocystis sp. PCC 7509])

HSP 1 Score: 132.494 bits (332), Expect = 5.279e-34
Identity = 82/212 (38.68%), Postives = 115/212 (54.25%), Query Frame = 0
Query:   55 WFASVCTCLVSNQPEQHAIRC-----DLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVK 261
            W+  V   L++N   ++  +       L  D+ G VLE+G G   N   +   T I  + G+EPN F+H   +     L L   +E++T+  E     D   DTVV T VLCSV N  + L EV RVLKPGGR  F+EH+A+P G+++R  Q T++PVW++  DGC  P+    L   KN G    +V Y  F AP+PL  V PH++G A K
Sbjct:   34 WYKRVFAWLMANGTAEYEKKIRDRKQSLFTDLHGTVLEIGAGTGANAAYY--PTDI-KWIGVEPNPFMHSYLQKNAEKLGLS--VEIQTISAEQLEAQDNSIDTVVSTLVLCSVPNLDKTLQEVLRVLKPGGRFLFIEHVAAPQGTFLRQVQNTVKPVWNVIGDGCN-PNRETGLA-IKNAGFA--KVDYQDFQAPVPL--VTPHIIGVATK 234          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1210113963|dbj|BAY33091.1| (type 11 methyltransferase [Nostoc carneum NIES-2107])

HSP 1 Score: 128.257 bits (321), Expect = 1.408e-32
Identity = 75/191 (39.27%), Postives = 105/191 (54.97%), Query Frame = 0
Query:   74 RCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPD--THLLLERFKNQGKEGF-EVMYHFFDAPMPLAIVKPHLMGHAVK 261
            +  L  ++ G++LE+GPG   N+  +    +   + G+EPN F+H   R     L L   ++++T   E     D   DTVV T VLCSV N      E+ RVLKPGGR  F+EHIA+P G+++R  Q T+ P+W    DGC  PD  T + LE      + GF ++ Y  F+AP P  IV PH+MG A K
Sbjct:   42 KTSLFTNLYGNILEIGPGTGPNLSYYPQDIN---WIGVEPNPFMHSYLREAAEQLGLD--IDIRTGTAESIDASDNSIDTVVSTLVLCSVPNLAATFREILRVLKPGGRFLFIEHIAAPSGTFLRRVQSTVRPIWQFLGDGCH-PDRETWVALE------QAGFSKLNYEHFEAPFP--IVSPHIMGVATK 218          
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1210177732|dbj|BAY96792.1| (type 11 methyltransferase [Tolypothrix tenuis PCC 7101] >gi|1210253698|dbj|BAZ72700.1| type 11 methyltransferase [Aulosira laxa NIES-50])

HSP 1 Score: 127.487 bits (319), Expect = 2.089e-32
Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 0
Query:   74 RCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPD--THLLLERFKNQGKEGF-EVMYHFFDAPMPLAIVKPHLMGHAVK 261
            +  L  ++ G++LE+GPG   N+  +    +   + G+EPN F+H   R     L   F ++++T   +     D   DTVV T VLCSV N      E+ RVLKPGGR  F+EHIA+P G+++R  Q T+ P+W    DGC  PD  T + LE      + GF ++ Y  F+AP P  IV PH+MG A K
Sbjct:   42 KTSLFTNLHGNILEIGPGTGPNLSYYPQDIN---WIGVEPNPFMHSYLREAAEQLG--FNIDIRTGTADSIDASDNSIDTVVSTLVLCSVPNLAATFREILRVLKPGGRFLFIEHIAAPSGTFLRRVQSTVRPIWQFLGDGCH-PDRETWVALE------QAGFSKLNYEHFEAPFP--IVSPHIMGVATK 218          
The following BLAST results are available for this feature:
BLAST of EWM30279.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112938|gb|EWM30279.1|0.000e+0100.00methyltransferase type 11 [Nannochloropsis gaditan... [more]
gi|553194177|ref|XP_005855899.1|0.000e+099.20methyltransferase type 11 [Nannochloropsis gaditan... [more]
gi|923136334|ref|XP_013761632.1|1.459e-4135.80methyltransferase type 11 [Thecamonas trahens ATCC... [more]
gi|224009972|ref|XP_002293944.1|1.359e-3836.73predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1060040813|ref|WP_069069469.1|4.831e-3539.73SAM-dependent methyltransferase [Nostoc sp. KVJ20]... [more]
gi|1121287750|ref|WP_073600352.1|2.907e-3441.67class I SAM-dependent methyltransferase [Hydrococc... [more]
gi|493039758|ref|WP_006105811.1|3.724e-3438.69SAM-dependent methyltransferase [Coleofasciculus c... [more]
gi|497316096|ref|WP_009630309.1|5.279e-3438.68methylase involved in ubiquinone/menaquinone biosy... [more]
gi|1210113963|dbj|BAY33091.1|1.408e-3239.27type 11 methyltransferase [Nostoc carneum NIES-210... [more]
gi|1210177732|dbj|BAY96792.1|2.089e-3238.74type 11 methyltransferase [Tolypothrix tenuis PCC ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna451rna451Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications