EWM30279.1, cds451 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|585112938|gb|EWM30279.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0 Query: 1 MQEDGPRHTVPVHRGGKGRMTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 269 MQEDGPRHTVPVHRGGKGRMTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ Sbjct: 1 MQEDGPRHTVPVHRGGKGRMTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 269
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|553194177|ref|XP_005855899.1| (methyltransferase type 11 [Nannochloropsis gaditana CCMP526] >gi|422293162|gb|EKU20462.1| methyltransferase type 11 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 514.998 bits (1325), Expect = 0.000e+0 Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 0 Query: 20 MTSFIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 269 MTS IKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWS+ALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ Sbjct: 1 MTSSIKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSVALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVKKGREAGEQ 250
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|923136334|ref|XP_013761632.1| (methyltransferase type 11 [Thecamonas trahens ATCC 50062] >gi|906561489|gb|KNC54732.1| methyltransferase type 11 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 152.14 bits (383), Expect = 1.459e-41 Identity = 87/243 (35.80%), Postives = 130/243 (53.50%), Query Frame = 0 Query: 24 IKIVSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCTCLVSNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEH-----SGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVK 261 + ++ + F+ ++ G L + R FAS C + PE A+RC+++ + G VLE+GPGP N+ C+ +T++TG+EPN F A + +++ ++G +G+ D DT V THVLCSV + +QVLAE RVLKPGG++FFLEH+ + + F Q+ I P+W I DGC+F LE G ++ FFDAP+ L I KPH+ G A K Sbjct: 4 LTLLGRVAFMTLFAVICTAGVLHMHRPTRRWAFASFCVAMNKRSPEMRALRCEVVGNATGHVLEIGPGPGGNLACY--GPEVTAWTGVEPN----PEFAPYVAAAAAATERKIRLVDGVAEDLVAAGVADASIDTYVATHVLCSVDDVSQVLAEASRVLKPGGKLFFLEHVLAQDSPTLAFVQQAIAPLWRIFGDGCEFRTQWYELEAAAAAGLF-IDLEITFFDAPIKLVIAKPHIKGSATK 239
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|224009972|ref|XP_002293944.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970616|gb|EED88953.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 148.673 bits (374), Expect = 1.359e-38 Identity = 90/245 (36.73%), Postives = 131/245 (53.47%), Query Frame = 0 Query: 27 VSYLFFVVTLSLALALGYLRQNPEFRHRWFASVCT--CLVSNQPEQHAIRCDLLK--DVRGDVLELGPGPATNMECFEGKT-SITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLP-DEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIAS-PPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMP--LAIVKPHLMGHAVKK 262 VS+L + + + L L NPE R R F ++C L + ++H RC +L +V G V+E G GP TN +C+E + Y +EPN + E + + L FPLE L+GE + D FD VV THVLCSV + VLA DR LKPGGR+ F+EH G+ + + Q+ P+ +I +GCKF D ++E + + + FE+ FDAPMP + +PH+ G A K+ Sbjct: 163 VSFLISIALSGIGIFLFVLSVNPELRRRNFVNLCVGQNLKGSPLDEH--RCGILNEGNVTGRVMEFGAGPGTNFKCWENTNIQVEKYVVVEPNTYFEEKLQAEKQARGLEFPLEFVGLKGESVDIAEDGTFDVVVLTHVLCSVDSPEVVLANADRALKPGGRIIFMEHSKELREGTTVWYLQQVAAPILAIVGNGCKFLDMRSVIEGYLSNDR--FELEMLDFDAPMPKMMTFARPHVKGVATKR 403
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1060040813|ref|WP_069069469.1| (SAM-dependent methyltransferase [Nostoc sp. KVJ20] >gi|1059440959|gb|ODG98437.1| methyltransferase [Nostoc sp. KVJ20]) HSP 1 Score: 134.42 bits (337), Expect = 4.831e-35 Identity = 87/219 (39.73%), Postives = 121/219 (55.25%), Query Frame = 0 Query: 46 RQNPEFRHRWFASVCTCLVSNQPEQHAIRCD-LLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFE-VMYHFFDAPMPLAIVKPHLMGHAVKK 262 + +P++ R FA + + E+ A R L + G+VLE+GPG N+ + S + GIEPN F+H + + L+L ++L++ EH + D D VV T VLCSV+N VL EV RVLKPGGR FF+EH+A+P G+ +R Q I+P+W DGC HL E + GFE V Y F A +P AIV P ++G AVKK Sbjct: 12 KGSPDWYKRLFAWMMAHGNAKYEEEIADRKRALFAQLHGNVLEIGPGTGPNLSYY---PSDIHWIGIEPNPFMHPYLQQEAERLALD--IDLRSGTAEHLEVEDNSMDVVVSTLVLCSVNNLAAVLQEVIRVLKPGGRFFFVEHVAAPQGTMLRRIQHGIKPLWKTLGDGC-----HLDRETWLALENAGFEQVDYQHFRANLP-AIVSPQIIGVAVKK 219
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1121287750|ref|WP_073600352.1| (class I SAM-dependent methyltransferase [Hydrococcus rivularis] >gi|1115257400|gb|OKH21731.1| SAM-dependent methyltransferase [Hydrococcus rivularis NIES-593]) HSP 1 Score: 132.88 bits (333), Expect = 2.907e-34 Identity = 80/192 (41.67%), Postives = 105/192 (54.69%), Query Frame = 0 Query: 73 IRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCK-FPDTHLLLERFKNQGKEGFE-VMYHFFDAPMPLAIVKPHLMGHAVKK 262 ++ L D++G VLE+GPG N+ + S + GIEPN F+H+ + + L L +EL+ E + D DTVV THVLCSV + L E+ RVLKPGGR F+EH+A+ G+W R Q IEPVW D C +T L LE K GFE V Y F+ +P IV PH+ G A KK Sbjct: 45 LKQSLFGDLQGRVLEIGPGAGANLSYY---PSDIHWIGIEPNPFMHQYLKQEAERLGLK-KIELRLGCAEQLDMEDNSIDTVVSTHVLCSVTDLATTLQEIGRVLKPGGRFLFIEHVAAECGTWTRRIQDGIEPVWKSIFDNCHPNRETWLALE------KAGFERVDYQDFNLSIP--IVSPHIAGIARKK 224
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|493039758|ref|WP_006105811.1| (SAM-dependent methyltransferase [Coleofasciculus chthonoplastes] >gi|196176263|gb|EDX71279.1| Methyltransferase domain family [Coleofasciculus chthonoplastes PCC 7420]) HSP 1 Score: 132.494 bits (332), Expect = 3.724e-34 Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = 0 Query: 65 SNQPEQHAIRCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCK-FPDTHLLLERFKNQGKEGFE-VMYHFFDAPMPLAIVKPHLMGHAVK 261 SN ++ L D++G V+E+GPG N+ + T I + G+EPN F+H + + L +++K+ E + D D VV T+VLCSV N + + E+ R+LKPGGR F+EH+A+ GSW R Q +IEPVW DGC+ +T L LE K GFE + Y F P P IV PH+ G A K Sbjct: 37 SNHSTLAQLKQVLFADLQGKVVEIGPGAGANLAYY--PTDI-HWIGVEPNPFMHSYLEQEAQQVGLN-RIDIKSGSAERIDVDDNSVDAVVSTYVLCSVSNLSATVQEIRRILKPGGRFLFVEHVAAECGSWQRRIQGSIEPVWKTLFDGCRPNRETGLALE------KAGFENINYQQFQVPFP--IVSPHISGVATK 223
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|497316096|ref|WP_009630309.1| (methylase involved in ubiquinone/menaquinone biosynthesis [Synechocystis sp. PCC 7509]) HSP 1 Score: 132.494 bits (332), Expect = 5.279e-34 Identity = 82/212 (38.68%), Postives = 115/212 (54.25%), Query Frame = 0 Query: 55 WFASVCTCLVSNQPEQHAIRC-----DLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPDTHLLLERFKNQGKEGFEVMYHFFDAPMPLAIVKPHLMGHAVK 261 W+ V L++N ++ + L D+ G VLE+G G N + T I + G+EPN F+H + L L +E++T+ E D DTVV T VLCSV N + L EV RVLKPGGR F+EH+A+P G+++R Q T++PVW++ DGC P+ L KN G +V Y F AP+PL V PH++G A K Sbjct: 34 WYKRVFAWLMANGTAEYEKKIRDRKQSLFTDLHGTVLEIGAGTGANAAYY--PTDI-KWIGVEPNPFMHSYLQKNAEKLGLS--VEIQTISAEQLEAQDNSIDTVVSTLVLCSVPNLDKTLQEVLRVLKPGGRFLFIEHVAAPQGTFLRQVQNTVKPVWNVIGDGCN-PNRETGLA-IKNAGFA--KVDYQDFQAPVPL--VTPHIIGVATK 234
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1210113963|dbj|BAY33091.1| (type 11 methyltransferase [Nostoc carneum NIES-2107]) HSP 1 Score: 128.257 bits (321), Expect = 1.408e-32 Identity = 75/191 (39.27%), Postives = 105/191 (54.97%), Query Frame = 0 Query: 74 RCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPD--THLLLERFKNQGKEGF-EVMYHFFDAPMPLAIVKPHLMGHAVK 261 + L ++ G++LE+GPG N+ + + + G+EPN F+H R L L ++++T E D DTVV T VLCSV N E+ RVLKPGGR F+EHIA+P G+++R Q T+ P+W DGC PD T + LE + GF ++ Y F+AP P IV PH+MG A K Sbjct: 42 KTSLFTNLYGNILEIGPGTGPNLSYYPQDIN---WIGVEPNPFMHSYLREAAEQLGLD--IDIRTGTAESIDASDNSIDTVVSTLVLCSVPNLAATFREILRVLKPGGRFLFIEHIAAPSGTFLRRVQSTVRPIWQFLGDGCH-PDRETWVALE------QAGFSKLNYEHFEAPFP--IVSPHIMGVATK 218
BLAST of EWM30279.1 vs. NCBI_GenBank
Match: gi|1210177732|dbj|BAY96792.1| (type 11 methyltransferase [Tolypothrix tenuis PCC 7101] >gi|1210253698|dbj|BAZ72700.1| type 11 methyltransferase [Aulosira laxa NIES-50]) HSP 1 Score: 127.487 bits (319), Expect = 2.089e-32 Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 0 Query: 74 RCDLLKDVRGDVLELGPGPATNMECFEGKTSITSYTGIEPNVFLHEVFRNKTAHLSLPFPLELKTLEGEHSGLPDEMFDTVVFTHVLCSVHNATQVLAEVDRVLKPGGRVFFLEHIASPPGSWMRFFQKTIEPVWSIALDGCKFPD--THLLLERFKNQGKEGF-EVMYHFFDAPMPLAIVKPHLMGHAVK 261 + L ++ G++LE+GPG N+ + + + G+EPN F+H R L F ++++T + D DTVV T VLCSV N E+ RVLKPGGR F+EHIA+P G+++R Q T+ P+W DGC PD T + LE + GF ++ Y F+AP P IV PH+MG A K Sbjct: 42 KTSLFTNLHGNILEIGPGTGPNLSYYPQDIN---WIGVEPNPFMHSYLREAAEQLG--FNIDIRTGTADSIDASDNSIDTVVSTLVLCSVPNLAATFREILRVLKPGGRFLFIEHIAAPSGTFLRRVQSTVRPIWQFLGDGCH-PDRETWVALE------QAGFSKLNYEHFEAPFP--IVSPHIMGVATK 218 The following BLAST results are available for this feature:
BLAST of EWM30279.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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