EWM26168.1, cds4506 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|585108164|gb|EWM26168.1| (Peptidyl-prolyl cis-trans isomerase, FKBP-type [Nannochloropsis gaditana]) HSP 1 Score: 946.806 bits (2446), Expect = 0.000e+0 Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0 Query: 1 MAAQGSRTRKRSRTSGLPLCLLATRLRLSGACNLAVFFSFFLSLKLSYAFMSIAPKLPHRSRAGLPLDPHAAFYYLVHSPPSPLISSPIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNRENGGGSGPLAEAKAAMEKEQREEEQQQGEGIDGFSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPENKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEVRLEKKEPMRRIWSTVFKDQ 458 MAAQGSRTRKRSRTSGLPLCLLATRLRLSGACNLAVFFSFFLSLKLSYAFMSIAPKLPHRSRAGLPLDPHAAFYYLVHSPPSPLISSPIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNRENGGGSGPLAEAKAAMEKEQREEEQQQGEGIDGFSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPENKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEVRLEKKEPMRRIWSTVFKDQ Sbjct: 1 MAAQGSRTRKRSRTSGLPLCLLATRLRLSGACNLAVFFSFFLSLKLSYAFMSIAPKLPHRSRAGLPLDPHAAFYYLVHSPPSPLISSPIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNRENGGGSGPLAEAKAAMEKEQREEEQQQGEGIDGFSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPENKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEVRLEKKEPMRRIWSTVFKDQ 458
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|553180294|ref|XP_005853381.1| (translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526] >gi|422295679|gb|EKU22978.1| translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 900.968 bits (2327), Expect = 0.000e+0 Identity = 436/439 (99.32%), Postives = 436/439 (99.32%), Query Frame = 0 Query: 1 MAAQGSRTRKRSRTSGLPLCLLATRLRLSGACNLAVFFSFFLSLKLSYAFMSIAPKLPHRSRAGLPLDPHAAFYYLVHSPPSPLISSPIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNRENGGGSGPLAEAKAAMEKEQREEEQQQGEGIDGFSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPENKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEV 439 MAAQGSRTRKRSRTSGLPLCLLATRLRLSGACNLAVFFSFFLSLKLSYAFMSIAPKLP RSRAGLPLDPHAAFYYLVHSPPSP I SPIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNRENGGGSGPLAEAKAAMEKEQREEEQQQGEGIDGFSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPENKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEV Sbjct: 1 MAAQGSRTRKRSRTSGLPLCLLATRLRLSGACNLAVFFSFFLSLKLSYAFMSIAPKLPRRSRAGLPLDPHAAFYYLVHSPPSPFIPSPIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNRENGGGSGPLAEAKAAMEKEQREEEQQQGEGIDGFSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPENKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEV 439
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|299470111|emb|CBN78140.1| (peptidylprolyl isomerase-like protein [Ectocarpus siliculosus]) HSP 1 Score: 128.257 bits (321), Expect = 1.984e-28 Identity = 112/379 (29.55%), Postives = 170/379 (44.85%), Query Frame = 0 Query: 104 SDEPVDLSGD-GGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMK---KPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQG---AGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNRENGGGSGPLAEAKAAMEKEQREEEQQQGEGIDGFSPPSTPRVEAIPEDAN-KGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLT-NRVLTVGFKTPENKESWIIGGDLFGPIELDSSFWVLSK------------DYTDELTE-----GKTCVEVRLEKKEPMRRIWSTVFK 456 S E DLSG G LK V G+ PP S KV + MK G+ IA+ + KP EF LG E GW+ A++ M EVA + C P+YAFG+A G +IPP A + TRL+L +W L A VE +L ++W E++ +GTSPM KD G +N++ +A M + + A PE+ + +G K+ + ++ Q V G P + + ERA Y+++ +PVP + +DV V + +R+L V T + G G + LD W++S DE+ + G+TCV+V LEK++P +W V++ Sbjct: 213 SGEFADLSGGRGSCLKRVDEDGF-ETDGNPPKGSKIKVHYKMKVVDGENIASSGEDRTKPFEFRLGRWPSEATHGWDKAISAMHRGEVATLICGPQYAFGAA-GAPPRIPPNATVETRLELEDWLDLAAEYNAVPGKVETDEELRERWSEDLADGTSPM----------KDEAG-----LNKK----------LQAEM----------------------SAKASATPENTDHRGKKIYDLESKEAREIMAKQKVQGYTPDFGYVERANYLDLYIPVPAGTRAKDVTVEIHPDRMLVVVKGTGVVTQ-----GHFQGKVALDGCHWLMSDLSLDPPGSTALGTQDDEVRQGPVYRGETCVQVFLEKRKPFDTLWENVYR 537
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|1036896847|ref|XP_017025998.1| (PREDICTED: FK506-binding protein 59 [Drosophila kikkawai]) HSP 1 Score: 96.2857 bits (238), Expect = 5.562e-18 Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 0 Query: 103 PSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLI------ANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWR 224 P++ +DLSGDGGVLK +LR G G T PH+ C V+ TG+L+ ++ ++P EF LG N VI+ ++M VATMK E +TC+P YA+G+A G IPP A +V L++LNW+ Sbjct: 2 PNENQIDLSGDGGVLKEILREGQG----TETPHTGCTVSL---HYTGRLVDGTEFDSSVAREPFEFPLGKGN--VIKAFDMGVATMKRGERCFLTCAPNYAYGAA-GSPPAIPPDATLVFELEMLNWK 119
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|38048605|gb|AAR10205.1| (similar to Drosophila melanogaster FKBP59, partial [Drosophila yakuba]) HSP 1 Score: 90.8929 bits (224), Expect = 9.834e-18 Identity = 54/129 (41.86%), Postives = 73/129 (56.59%), Query Frame = 0 Query: 103 PSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIAN-------RMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWR 224 P D +DLSGDGGVLK +L+ G G T PHS C V+ TG+L+ +P EF LG N VI+ ++M VATMK E +TC+P YA+G+A G IPP A ++ L++L W+ Sbjct: 2 PEDNKIDLSGDGGVLKEILKEGTG----TETPHSGCTVSLHY---TGRLVDGTEFDSSVSRNEPFEFPLGKGN--VIKAFDMGVATMKLGERCFLTCAPNYAYGAA-GSPPAIPPDATLIFELEMLGWK 120
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|1189078547|ref|XP_020807345.1| (FK506-binding protein 59 [Drosophila serrata]) HSP 1 Score: 94.3597 bits (233), Expect = 2.899e-17 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 0 Query: 103 PSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLI------ANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWR 224 P++ +DLSGDGGVLK +L+ G G T PH+ C V+ TG+L+ ++ ++P EF LG N VI+ ++M VATMK E +TC+P YA+G+A G IPP A ++ L++LNW+ Sbjct: 2 PNENQIDLSGDGGVLKEILKEGQG----TETPHTGCTVSL---HYTGRLVDGTEFDSSISREPFEFPLGKGN--VIKAFDMGVATMKRGERCFLTCAPNYAYGAA-GSPPTIPPDATLIFELEMLNWK 119
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|195473391|ref|XP_002088979.1| (FKBP59 [Drosophila yakuba] >gi|194175080|gb|EDW88691.1| FKBP59 [Drosophila yakuba]) HSP 1 Score: 92.0485 bits (227), Expect = 1.596e-16 Identity = 54/129 (41.86%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 103 PSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLI-------ANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWR 224 P D +DLSGDGGVLK +L+ G G T PHS C V+ TG+L+ + +P EF LG N VI+ ++M VATMK E +TC+P YA+G+A G IPP A ++ L++L W+ Sbjct: 2 PEDNKIDLSGDGGVLKEILKEGTG----TETPHSGCTVSL---HYTGRLVDGTEFDSSVSRNEPFEFPLGKGN--VIKAFDMGVATMKLGERCFLTCAPNYAYGAA-GSPPAIPPDATLIFELEMLGWK 120
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|195339555|ref|XP_002036385.1| (GM17712 [Drosophila sechellia] >gi|194130265|gb|EDW52308.1| GM17712 [Drosophila sechellia]) HSP 1 Score: 91.6633 bits (226), Expect = 2.163e-16 Identity = 54/129 (41.86%), Postives = 73/129 (56.59%), Query Frame = 0 Query: 103 PSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANR-------MKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWR 224 P D +DLSGDGGVLK +L+ G G T PHS C V+ TG+L+ +P EF LG N VI+ ++M VATMK E +TC+P YA+G+A G IPP A ++ L++L W+ Sbjct: 2 PEDNKIDLSGDGGVLKEILKEGTG----TETPHSGCTVSL---HYTGRLVDGTEFDSSLTRNEPFEFPLGKGN--VIKAFDMGVATMKLGERCFLTCAPNYAYGAA-GSPPAIPPDATLIFELEMLGWK 120
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|194190830|gb|EDX04406.1| (GD23632 [Drosophila simulans]) HSP 1 Score: 91.2781 bits (225), Expect = 2.485e-16 Identity = 54/129 (41.86%), Postives = 72/129 (55.81%), Query Frame = 0 Query: 103 PSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANR-------MKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWR 224 P D +DLSGDGGVLK +L+ G G T PHS C V+ TG+L+ P EF LG N VI+ ++M VATMK E +TC+P YA+G+A G IPP A ++ L++L W+ Sbjct: 2 PEDNKIDLSGDGGVLKEILKEGTG----TETPHSGCTVSL---HYTGRLVDGTEFDSSLTRNDPFEFPLGKGN--VIKAFDMGVATMKLGERCFLTCAPNYAYGAA-GSPPAIPPDATLIFELEMLGWK 120
BLAST of EWM26168.1 vs. NCBI_GenBank
Match: gi|194859312|ref|XP_001969353.1| (uncharacterized protein Dere_GG10059 [Drosophila erecta] >gi|190661220|gb|EDV58412.1| uncharacterized protein Dere_GG10059 [Drosophila erecta]) HSP 1 Score: 91.6633 bits (226), Expect = 2.577e-16 Identity = 54/129 (41.86%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 103 PSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLI-------ANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWR 224 P + +DLSGDGGVLK +LR G G T PHS C V+ TG+L+ + +P EF LG N VI+ ++M VATMK E +TC+P YA+G+A G IPP A ++ L++L W+ Sbjct: 2 PEENKIDLSGDGGVLKEILREGTG----TETPHSGCTVSL---HYTGRLVDGTEFDSSVSRNEPFEFPLGKGN--VIKAFDMGVATMKLGERCFLTCAPNYAYGAA-GSPPAIPPDATLIFELEMLGWK 120 The following BLAST results are available for this feature:
BLAST of EWM26168.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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