EWM26234.1, cds4473 (CDS) Nannochloropsis gaditana

Overview
NameEWM26234.1
Unique Namecds4473
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:707845..707873 -
Alignment locationCM002463.1:707630..707717 -
Alignment locationCM002463.1:705865..707493 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26234.1
ProductImportin-alpha, importin-beta-binding domain protein
Orig transcript idgnl|cribi|Naga_100025g3.7525.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:707845..707873 -
CM002463.1supercontigCM002463.1:707630..707717 -
CM002463.1supercontigCM002463.1:705865..707493 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
GO:0005829cytosol
GO:0005635nuclear envelope
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006606protein import into nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0005488binding
GO:0008565protein transporter activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR024931Importing_su_alpha
IPR002652Importin-a_IBB
IPR011989ARM-like
IPR000225Armadillo
Homology
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|585108233|gb|EWM26234.1| (Importin-alpha, importin-beta-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1195.65 bits (3092), Expect = 0.000e+0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0
Query:    1 MHPAYARGNRRAVPLHATECQIVVSNPVVMSTPADKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSAALDMAQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNGTFSFSTGEMGGGPGAGGGVGGGVQPPGSFNFNMG 581
            MHPAYARGNRRAVPLHATECQIVVSNPVVMSTPADKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSAALDMAQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNGTFSFSTGEMGGGPGAGGGVGGGVQPPGSFNFNMG
Sbjct:    1 MHPAYARGNRRAVPLHATECQIVVSNPVVMSTPADKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSAALDMAQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNGTFSFSTGEMGGGPGAGGGVGGGVQPPGSFNFNMG 581          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|676383137|ref|XP_009034847.1| (hypothetical protein AURANDRAFT_69702, partial [Aureococcus anophagefferens] >gi|323454132|gb|EGB10002.1| hypothetical protein AURANDRAFT_69702, partial [Aureococcus anophagefferens])

HSP 1 Score: 723.005 bits (1865), Expect = 0.000e+0
Identity = 354/498 (71.08%), Postives = 416/498 (83.53%), Query Frame = 0
Query:   39 QRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSAALDMA--QRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAV 534
            QRK+ YKKG+D D++RRRREET IQIRKNK+EE L Q+RRT  +       N G   G+  +D A  Q+L+++P +VAGV S+DP+V LEATTQFRKLLSIE+NPPIQ VI+AGVVPRLV+FLQ+ E+P LQFEAAWALTNIASGTS+HT+VVI EGAVPIF +LL SPNDDVREQAVWALGNIAGDSP CRDLVL + A+ PLLQQLH NSKL+MLRNATWTLSNFCRGKPQP+F  V+ ALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVC+RL+ELLMHPS ++QTPALRTVGNIVTGDDLQTQIII + ALPCL ALL + KK I+KEACWT+SNITAGNKDQIQ+VID  ++ PL+ LL +A+FD++KEAAWA+SNATSGGT  QIK LV+Q CI PLC+LL   D KII VALE LENILKVG+ E K     +N MA  +A+  GL+K+E+LQ H +  +YEK+V ++E +FGV+EE V
Sbjct:   11 QRKQTYKKGVDQDESRRRREETTIQIRKNKKEERL-QKRRTATVNP-----NQGGAQGAQQMDAAVVQKLEQLPNLVAGVHSLDPSVHLEATTQFRKLLSIERNPPIQMVIDAGVVPRLVQFLQKDESPALQFEAAWALTNIASGTSDHTRVVIEEGAVPIFCRLLLSPNDDVREQAVWALGNIAGDSPTCRDLVLREGAMQPLLQQLHENSKLSMLRNATWTLSNFCRGKPQPEFMTVRPALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCRRLVELLMHPSPSVQTPALRTVGNIVTGDDLQTQIIINFSALPCLHALLGNPKKGIRKEACWTISNITAGNKDQIQSVIDSNIVPPLVQLLNSAEFDIRKEAAWAISNATSGGTPMQIKFLVQQACIPPLCELLSVADVKIIIVALEALENILKVGDAEAKQTQGGHNLMANHIADSEGLKKIEDLQQHDNNDIYEKAVRILETYFGVDEEDV 502          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|299471821|emb|CBN79488.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0
Identity = 357/554 (64.44%), Postives = 428/554 (77.26%), Query Frame = 0
Query:   35 DKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALG------VNNAGA-GGGSAALDMA--QRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNGTFSFSTGEMGGGPGAGGGVGGGVQP-PGSFNF 578
            DKE +R K +K G+  D+ARR R ETQ+QIRK K+EE LNQRRR    G+ LG      +   GA   G+ A+D     RL ++P +V GV S+DP+VQL+ TT FRK+LSIE+NPPIQ+VI+AGVVP+ VEFLQR +NP LQFE+AWALTNIASGTS+HT+VVI +GAVPIFV+LL SPNDDVREQAVWALGNIAGDSP CRDLVL Q A+ PLLQQL   SKL+MLRNATWTLSNFCRGKPQP FE V+ ALPTLAQLI+S DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+RL+ELL+H S  +QTPALRTVGNIVTGDDLQTQ+II ++ALP LL LL+  KK I+KEACWT+SNITAGNK+QIQAVID  +I PLI LL  A+FD++KEAAWA+SNATSGG  EQIK+LV +GCI PL DLL   D KI++VALEGLENILK G+ E K  G E N+MA  + E GG++++E+LQ H +  +Y K++ L+ER+FGVE+E  + G+A    +    F+F     G    AG     G QP  G FNF
Sbjct:    8 DKEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGAAGDTLGAFSFATIPEGGAPAAGTNAVDTPAHMRLDQLPQLVIGVQSLDPSVQLDTTTAFRKILSIERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVWALGNIAGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIVTGDDLQTQVIINFNALPWLLNLLSSSKKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFDIRKEAAWAISNATSGGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEINQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEE-DNGIAPLEAEGAQQFAF-----GQPTQAGTDTTFGAQPNQGGFNF 555          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|224013122|ref|XP_002295213.1| (importin alpha 1 subunit-like protein [Thalassiosira pseudonana CCMP1335] >gi|220969175|gb|EED87517.1| importin alpha 1 subunit-like protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0
Identity = 357/553 (64.56%), Postives = 427/553 (77.22%), Query Frame = 0
Query:   35 DKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTD---DLGN-----------ALGVNNAGA-------GGGSAALD--MAQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNGTFSFSTGEMGGGPGAGG 564
            +KE +RKK +KK ID D+ RRRREET +QIRK+K++  L +RR+     D G+           A+G    G        GGG+ A D     +L+ +P M+ GV   DP VQ E TTQFR+LLSIEKNPPIQ VI +GVVPR VEFL R +NP LQFEAAWALTNIASGTSEHTKVV+  GAVPIFV+LL S NDDVREQAVWALGNIAGDSP CRDLVL   A+ PLL QLH  SKL+MLRNATWTLSNFCRGKPQPDFE VK +L TL+QLI+SPDEEVLTDACWALSYLSDGPNEKIQ+VIEAGVC+RL+ELL++PS  +QTPALRTVGNIVTGDDLQTQ II  +ALPCLLALL+  KK I+KEACWT+SNITAGNKDQIQAV+D  +I PLI LL  A+FD++KEAAWA+SNATSGG+  QIK LV+QGCI+PLCDLL  +D KI+++ALEGLENILKVG+ E  + G+ +NEM+  VAE  GL K+EELQ+HS+  +YEK V+++E++FGV+EE     +A +  +  G F+FS  + G   G GG
Sbjct:    2 NKEEERKKTFKKSIDIDEGRRRREETTLQIRKSKKDVRLAKRRQMPAAMDNGDTPAGLAASSMLAMGGVAPGGYGAVDHGGGGAMATDGSSGNKLENLPQMIQGVMGADPTVQTECTTQFRRLLSIEKNPPIQQVIESGVVPRFVEFLGRDDNPALQFEAAWALTNIASGTSEHTKVVMEVGAVPIFVRLLMSTNDDVREQAVWALGNIAGDSPPCRDLVLQCGAMPPLLSQLHQGSKLSMLRNATWTLSNFCRGKPQPDFEAVKPSLSTLSQLIFSPDEEVLTDACWALSYLSDGPNEKIQSVIEAGVCRRLVELLLNPSPAVQTPALRTVGNIVTGDDLQTQFIINNNALPCLLALLSSPKKGIRKEACWTISNITAGNKDQIQAVVDNNIIPPLIQLLTNAEFDIRKEAAWAISNATSGGSPAQIKFLVQQGCIRPLCDLLTVNDAKIVTIALEGLENILKVGDEEANVTGS-HNEMSTYVAEAEGLSKIEELQHHSNNDIYEKCVNILEKYFGVDEEEEMANIAPEMAEGGGQFAFSAPQ-GMDDGNGG 552          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|1210517714|dbj|GAX23410.1| (hypothetical protein FisN_15Lh131 [Fistulifera solaris])

HSP 1 Score: 699.123 bits (1803), Expect = 0.000e+0
Identity = 347/557 (62.30%), Postives = 426/557 (76.48%), Query Frame = 0
Query:   33 PADKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSAALDM----------------------AQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNG------------TFSFSTGE 555
            PAD++      +KK ID++++RR REET IQ+RKNK++  + +RR+    G       AG    S  +++                      A +L+++PAMV GV   DPAVQ E TTQFR+LLSIEKNPPIQ VI+A VVPR VEFLQR +NP LQFEAAWALTNIASGTSEHTKVV+  GAVPIFV+LL SPNDDVREQAVWALGNIAGDSP CRDLVL   A+ PLL QLH NSKL+MLRNATWTLSNFCRGKPQPDFE+V+ ALPTLAQLI+SPDEEVLTDACWALSYLSDGPNEKIQAVIE+G+ +RL+ELL++PS  +QTPALRT+GNIVTG+DLQTQ +I  +ALPCLLALL+  KK I+KEACWT+SNITAGNK+QIQ+VI+  +I PL+ LL  A+FD++KEAAWA+SNATSGG+ +QIK LV+QGCI+PLCDLL   D KI+++ALEGLENILK GE E++  G+  N M AL++E  GL K+EELQ HS+  +YEKS+ ++E +F +EE   EG +A+ APQ +G            TF F++G+
Sbjct:    7 PADRQ------FKKTIDAEESRRDREETTIQLRKNKKDARMAKRRQMQS-GEMSATTPAGLAAASMLMNVGDNTYADLDQGMITSTARAAVNASKLEQLPAMVQGVMGNDPAVQTECTTQFRRLLSIEKNPPIQQVIDAQVVPRFVEFLQRDDNPALQFEAAWALTNIASGTSEHTKVVMEVGAVPIFVRLLMSPNDDVREQAVWALGNIAGDSPPCRDLVLQAGAMQPLLMQLHQNSKLSMLRNATWTLSNFCRGKPQPDFEMVRPALPTLAQLIFSPDEEVLTDACWALSYLSDGPNEKIQAVIESGIIRRLVELLLNPSPAVQTPALRTIGNIVTGNDLQTQYVINNNALPCLLALLSSPKKGIRKEACWTISNITAGNKEQIQSVIENNIIPPLVQLLSNAEFDIRKEAAWAISNATSGGSPQQIKFLVQQGCIRPLCDLLTVSDPKIVTIALEGLENILKTGEEESRQTGSP-NMMVALISEAEGLTKIEELQQHSNNDIYEKSIKILETYFDIEE---EGEIANIAPQMDGDQFGFGMSDGPSTFDFTSGQ 552          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|1210518043|dbj|GAX22974.1| (hypothetical protein FisN_15Hh131 [Fistulifera solaris])

HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0
Identity = 351/557 (63.02%), Postives = 428/557 (76.84%), Query Frame = 0
Query:   33 PADKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDD----------LGNALGVNNAGAGGGSAALDM------------AQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNG------------TFSFSTGE 555
            PAD++      +KK ID++++RR REET IQ+RKNK++  + +RR+             L  A  + NAG     A LD             A +L+++PAMV GV   DPAVQ E TTQFR+LLSIEKNPPIQ VI+A VVPR VEFLQR +NP LQFEAAWALTNIASGTSEHTKVV+  GAVPIFV+LL SPNDDVREQAVWALGNIAGDSP CRDLVL   A+ PLL QLH NSKL+MLRNATWTLSNFCRGKPQPDFE+V+ ALPTLAQLI+SPDEEVLTDACWALSYLSDGPNEKIQAVIE+G+ +RL+ELL++PS  +QTPALRT+GNIVTG+DLQTQ +I  +ALPCLLALL+  KK I+KEACWT+SNITAGNK+QIQ+VI+  +I PL+ LL  A+FD++KEAAWA+SNATSGG+ +QIK LV+QGCI+PLCDLL   D KI+++ALEGLENILK GE E++  G+  N M AL++E  GL K+EELQ HS+  +YEKS+ ++E +F +EE   EG +A+ APQ +G            TF F++G+
Sbjct:    7 PADRQ------FKKTIDAEESRRDREETTIQLRKNKKDARMAKRRQMPSGEMSATTPAGLAAANMLMNAG-DNTYADLDQGMITNTARAAVNASKLEQLPAMVQGVMGNDPAVQTECTTQFRRLLSIEKNPPIQQVIDAQVVPRFVEFLQRDDNPALQFEAAWALTNIASGTSEHTKVVMEVGAVPIFVRLLMSPNDDVREQAVWALGNIAGDSPPCRDLVLQAGAMQPLLMQLHQNSKLSMLRNATWTLSNFCRGKPQPDFEMVRPALPTLAQLIFSPDEEVLTDACWALSYLSDGPNEKIQAVIESGIIRRLVELLLNPSPAVQTPALRTIGNIVTGNDLQTQYVINNNALPCLLALLSSPKKGIRKEACWTISNITAGNKEQIQSVIENNIIPPLVQLLSNAEFDIRKEAAWAISNATSGGSPQQIKFLVQQGCIRPLCDLLTVSDPKIVTIALEGLENILKTGEEESRQTGSP-NMMVALISEAEGLTKIEELQQHSNNDIYEKSIKILETYFDIEE---EGEIANLAPQMDGDQFGFGMSDGPATFDFTSGQ 552          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|1072237776|gb|OEU22503.1| (putative importin alpha subunit [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 686.411 bits (1770), Expect = 0.000e+0
Identity = 360/564 (63.83%), Postives = 432/564 (76.60%), Query Frame = 0
Query:   40 RKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRT-----------------------DDLGNALGVNNAGAGGGSAALDMAQ-RLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLNHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNG-TFSFSTGEMGGGPGAGGGVGGGVQPPGSFNF 578
            RK A+KK +D+++ RRRREET +QIRK K++  L +RR+                        D+  + L +     G   A   MAQ +L+++PAMV GV   DPAVQ E TTQFR+LLSIEKNPPIQ+VI+AGVVPR VEFLQR +NP LQFEAAWALTNIASGTS+HTKVV+  GAVPIFV+LL SPNDDVREQAVWALGNIAGDSP CRDLVL   A+ PLLQQLH NSKL+MLRNATWTLSNFCRGKPQPDFE+V+ +LPTL+QLI+SPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVC+RL+ELL++PS  +QTPALRTVGNIVTG+DLQTQ II  +ALPCLLALL+  KK I+KEACWT+SNITAGNK+QIQAV++  +I PLI LL  A+FD++KEAAWA+SNATSGG A+QIK LV+QGCI+PLCDLL  +D KI+++ALEGLENILKVGE E+K  G + N MA  V+E  GL K+E+LQ HS+  +YEK + ++E +FGVEEE     +A+ APQ  G TF F   +               Q PG+F+F
Sbjct:   13 RKNAFKKTVDAEEGRRRREETTLQIRKTKKDARLAKRRQMPTGGLSAPTPAGMAAANMLMSTGDNTYSHLAMQQNTGGQVRA---MAQSKLEQLPAMVEGVMGNDPAVQTECTTQFRRLLSIEKNPPIQNVIDAGVVPRFVEFLQRDDNPALQFEAAWALTNIASGTSDHTKVVMEVGAVPIFVRLLLSPNDDVREQAVWALGNIAGDSPPCRDLVLQAGAMQPLLQQLHQNSKLSMLRNATWTLSNFCRGKPQPDFEMVRPSLPTLSQLIFSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCRRLVELLLNPSPAVQTPALRTVGNIVTGNDLQTQFIINNNALPCLLALLSSPKKGIRKEACWTISNITAGNKEQIQAVVENNIIPPLIQLLTNAEFDIRKEAAWAISNATSGGNAQQIKFLVQQGCIRPLCDLLTVNDPKIVTIALEGLENILKVGEEESKATG-QPNAMAIFVSEAEGLNKIEDLQQHSNNDIYEKCIKILEAYFGVEEEEE---MAALAPQMEGNTFGFGMDQQ--------------QTPGTFDF 555          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|470132837|ref|XP_004302281.1| (PREDICTED: importin subunit alpha-4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 351/553 (63.47%), Postives = 419/553 (75.77%), Query Frame = 0
Query:   33 PADKEVQRKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSA-ALDMAQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALLN-HMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGAE--YNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNG---TFSFSTGEMGGGPGAGGGVGGGVQPPGSFNF 578
            P  +   RKK+YK G+D+DDARRRRE+  ++IRKNKRE+SL ++RR        G++N+    GSA  + + +RL+ +PAMV G+ S DPA+QLEATTQFRKLLSIE++PPI  VI AG VPR VEFL RQ+ P LQFEAAWALTN+ASGTSEHT+VVI  GAVP+FVQLLSS +DDVREQAVWALGN+AGDSP CRDLVL Q AL+PLL QL+  SKL+MLRNATWTLSNFCRGKP   FE VKAALP L QLIY  DEEVLTDACWALSYLSDGPN+KIQAVIEAGVC+RL+ELL+HPS T+  PALRTVGNIVTGDD QTQ +I    LPCL  LLN + KK+IKKEACWT+SNITAGNK QIQAVID  +I PL+ LL+ A+FD+KKEAAWA+SNATSGG+ EQI+ LV QGCIKPLCDLL+  D +I++V LEGLENILKVGE + +M GA    N  A ++ E  GL+K+E LQ H + ++YEK+V ++ER++  EE+        Q  Q NG    F+F     G  P A         PPG F F
Sbjct:    5 PNSRTESRKKSYKSGVDADDARRRREDNLVEIRKNKREDSLLKKRRE-------GLSNSQLLDGSANPVVVEKRLESIPAMVQGIWSNDPALQLEATTQFRKLLSIERSPPIDEVIKAGAVPRFVEFLGRQDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPLFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSQGALMPLLSQLNEKSKLSMLRNATWTLSNFCRGKPPTPFEQVKAALPVLQQLIYLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCQRLVELLLHPSATVLIPALRTVGNIVTGDDSQTQFVIENGVLPCLYQLLNQNHKKSIKKEACWTISNITAGNKAQIQAVIDAQIINPLVQLLQHAEFDIKKEAAWAISNATSGGSHEQIQFLVTQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEM-GANNGINLFAQMIDEFDGLEKIENLQTHDNNEIYEKAVKILERYWAEEED------EEQNLQQNGDGNAFTFG----GNQPAA---------PPGGFKF 530          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|168015969|ref|XP_001760522.1| (predicted protein [Physcomitrella patens] >gi|162688219|gb|EDQ74597.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0
Identity = 342/541 (63.22%), Postives = 417/541 (77.08%), Query Frame = 0
Query:   40 RKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSAALDMAQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALL-NHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKMVGA-EYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNGTFSFSTGEMGGGPGAGGGVGGGVQPPGSFNF 578
            RKK YK  +D+D+ARR+RE+  ++IRK+KREESL ++RR   L     +++      ++++   ++L+ +P MVAG+ S DPA+QLEATTQFRKLLSIE++PPI+ VI+AGVVPR VEFL R + P LQFEAAWALTNIASGTS+HT+VVI  GAVPIFVQLLSSP+DDVREQAVWALGN+AGDSP+CRDLVL   AL+PLL QL  N+KL+MLRNATWTLSNFCRGKPQP FE  K ALP L +LI+S DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+RL+ELL+HPS ++  PALRTVGNIVTGDDLQTQ II   ALPCLLALL N+ KK+IKKEACWT+SNITAGNKDQI AVID  +I PL+ LL TA+FD+KKEAAWA+SNATSGG+ EQIK+LV QGCIKPLCDLL   D +I++V+LEGLENILKVGE+E  +  +   N  A  + E  GL+K+E LQ H + ++YEK+V ++E ++  E+E                 +F+ G  G G   G     G  PPG FNF
Sbjct:   12 RKKGYKLAVDADEARRKREDNMVEIRKSKREESLLKKRRDGMLQQQQRISSV-----TSSISDKKQLESLPGMVAGLHSDDPAIQLEATTQFRKLLSIERSPPIEEVISAGVVPRFVEFLVRSDFPQLQFEAAWALTNIASGTSDHTRVVIEHGAVPIFVQLLSSPSDDVREQAVWALGNVAGDSPKCRDLVLSHGALMPLLAQLTDNTKLSMLRNATWTLSNFCRGKPQPPFEQSKPALPALERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQFIINNQALPCLLALLTNNHKKSIKKEACWTISNITAGNKDQIMAVIDANIIPPLVSLLATAEFDIKKEAAWAISNATSGGSPEQIKYLVTQGCIKPLCDLLTCPDPRIVTVSLEGLENILKVGEQEKDLGNSGGINLYARYIDEAEGLEKIENLQTHDNNEIYEKAVKILETYWLEEDE---------------DQNFAPGTEGQGFAFGTSSAAGA-PPGGFNF 531          
BLAST of EWM26234.1 vs. NCBI_GenBank
Match: gi|168042305|ref|XP_001773629.1| (predicted protein [Physcomitrella patens] >gi|162675017|gb|EDQ61517.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0
Identity = 340/531 (64.03%), Postives = 415/531 (78.15%), Query Frame = 0
Query:   40 RKKAYKKGIDSDDARRRREETQIQIRKNKREESLNQRRRTDDLGNALGVNNAGAGGGSAALDMAQRLKEVPAMVAGVSSMDPAVQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRQENPPLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVWALGNIAGDSPQCRDLVLGQHALLPLLQQLHVNSKLTMLRNATWTLSNFCRGKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCKRLIELLMHPSYTIQTPALRTVGNIVTGDDLQTQIIIGYHALPCLLALL-NHMKKTIKKEACWTVSNITAGNKDQIQAVIDQGMIRPLIGLLETADFDVKKEAAWALSNATSGGTAEQIKHLVEQGCIKPLCDLLVTDDNKIISVALEGLENILKVGERENKM-VGAEYNEMAALVAELGGLQKLEELQNHSSEQLYEKSVSLIERFFGVEEEAVEGGVASQAPQPNG-TFSFSTGEMGGGPGAGGGVG 567
            RKK YK  +D+D+ARR+RE+  ++IRK+KREESL ++RR     + +           ++L   ++L+ +PA+V+G+ S DPA QLEATTQFRKLLSIE++PPI+ VI+AGVVPR VEFL R + P LQFEAAWALTNIASGTS+HT+VVI  GAVPIFVQLLSSP+DDVREQAVWALGN+AGDSP+CRDLVLG  AL+PLL QL  N+KL+MLRNATWTLSNFCRGKPQP FE  K ALP L +LI+S DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+RL+ELL+HPS ++  PALRTVGNIVTGDDLQTQ II   ALPCLLALL N+ KK+IKKEACWT+SNITAGNKDQIQAVID  +I PL+ LL TA+FD+KKEAAWA+SNATSGG+ +QIK+LV QGCIKPLCDLL   D +I++V+LEGLENILKVGE+E  +      N  A  + E  GL+K+E LQ H + ++YEK+V ++E ++  E+E      ++ AP   G TF+F +    G P  G   G
Sbjct:   12 RKKGYKLAVDADEARRKREDNMVEIRKSKREESLLKKRR-----DGMPQLPQFVPSAQSSLSDKKQLESLPALVSGLYSDDPATQLEATTQFRKLLSIERSPPIEEVISAGVVPRFVEFLVRSDFPQLQFEAAWALTNIASGTSDHTRVVIDHGAVPIFVQLLSSPSDDVREQAVWALGNVAGDSPKCRDLVLGHGALMPLLAQLTENTKLSMLRNATWTLSNFCRGKPQPPFEQSKPALPALERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQFIINNQALPCLLALLTNNHKKSIKKEACWTISNITAGNKDQIQAVIDANIIPPLVSLLATAEFDIKKEAAWAISNATSGGSHDQIKYLVTQGCIKPLCDLLTCPDPRIVTVSLEGLENILKVGEQEKDLGQSGGINLYARYIDEAEGLEKIENLQTHDNNEIYEKAVKILETYWLEEDED-----SNAAPGTEGQTFAFGSSNAAGAPAGGFHFG 532          
The following BLAST results are available for this feature:
BLAST of EWM26234.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108233|gb|EWM26234.1|0.000e+0100.00Importin-alpha, importin-beta-binding domain prote... [more]
gi|676383137|ref|XP_009034847.1|0.000e+071.08hypothetical protein AURANDRAFT_69702, partial [Au... [more]
gi|299471821|emb|CBN79488.1|0.000e+064.44conserved unknown protein [Ectocarpus siliculosus][more]
gi|224013122|ref|XP_002295213.1|0.000e+064.56importin alpha 1 subunit-like protein [Thalassiosi... [more]
gi|1210517714|dbj|GAX23410.1|0.000e+062.30hypothetical protein FisN_15Lh131 [Fistulifera sol... [more]
gi|1210518043|dbj|GAX22974.1|0.000e+063.02hypothetical protein FisN_15Hh131 [Fistulifera sol... [more]
gi|1072237776|gb|OEU22503.1|0.000e+063.83putative importin alpha subunit [Fragilariopsis cy... [more]
gi|470132837|ref|XP_004302281.1|0.000e+063.47PREDICTED: importin subunit alpha-4 [Fragaria vesc... [more]
gi|168015969|ref|XP_001760522.1|0.000e+063.22predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|168042305|ref|XP_001773629.1|0.000e+064.03predicted protein [Physcomitrella patens] >gi|1626... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4484rna4484Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications