EWM26216.1, cds4460 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26216.1 vs. NCBI_GenBank
Match: gi|585108215|gb|EWM26216.1| (Cupredoxin [Nannochloropsis gaditana]) HSP 1 Score: 1898.63 bits (4917), Expect = 0.000e+0 Identity = 930/930 (100.00%), Postives = 930/930 (100.00%), Query Frame = 0
Query: 1 MAYRAIVTFLLLEVSLNHAWGMQDTKTTTLLSAKPSTLDKEPFQDVTSADGFLRVDLTVAPWLEQGAVSGKAALFHQGVKSSLAPILRAFPGDTVQIRVRSELPNNVENGRDDATSLALHGIRLTAATDKGGLHSRLAGPQLAIHTFTVDKQHAPGLHWYSVGGGLGFMGALYVLSTDADAASQSKVPGSRLLVFESQGAGSTYFINGDSPAPLHVRSGESQQLDLAYASGPDLLEIVAGKGCELELLAIDGVDLNEPRDVDYVPLVSRQRARVALTCQESGESALLARPRAHGIGSKAPKGQDSAQDGMQRLLAVSVFKAKGLPFSRLPRVVAPRPFKDTALAGATYLKDLASENSVSNSCTISLYPCHGKAFCSADRSACLTFPSISDGGVDPGRLGAAHDIDDFAAQGRVRELFVHTKIAARGASLRLSPPQHFQVLDFIPDEEEAVNPYLAEWGAFGEWRDVFPPLKGTFRVRYQAREEHDHEGTHVEYDGFQPLGNGQREDEAALGGDMRDKRSHRASWTFPGTSATEKPGDKNVEFRDAYLLVQATVGETDRDPAWVETSIKALIQEDLVEEEEPEPAADDDTIMPAEHMPTIVDKHEPNRGGERRDSRENKSRDTALETNRLLLAVEAPSTLAVPVQMPRRYLPAASLCNDSALVWPTAFTLHLKNSSSIYSVVGKLNELLQPKHGEDDRPQLCTVNVTLLSSVKAAAFTTGGVAAIGKNNTKSAPKRMPSHVVILLGFLGGACILFASVMAVRRFMAPAGPPRSSRRSSVHHDPTTIETQITELDDSTSLGVKSSALRHSSRSRTNSLTGVNLAILPPARLSAGNIAATPGAGGLGGSLSGTRTMPQHYRSSSSLPTDLAAFGHGRSSSMPLHGGAGLLPSRKQSIESINISNSGALGASLGSDMEHPEAAERTGKGESRRN 930
MAYRAIVTFLLLEVSLNHAWGMQDTKTTTLLSAKPSTLDKEPFQDVTSADGFLRVDLTVAPWLEQGAVSGKAALFHQGVKSSLAPILRAFPGDTVQIRVRSELPNNVENGRDDATSLALHGIRLTAATDKGGLHSRLAGPQLAIHTFTVDKQHAPGLHWYSVGGGLGFMGALYVLSTDADAASQSKVPGSRLLVFESQGAGSTYFINGDSPAPLHVRSGESQQLDLAYASGPDLLEIVAGKGCELELLAIDGVDLNEPRDVDYVPLVSRQRARVALTCQESGESALLARPRAHGIGSKAPKGQDSAQDGMQRLLAVSVFKAKGLPFSRLPRVVAPRPFKDTALAGATYLKDLASENSVSNSCTISLYPCHGKAFCSADRSACLTFPSISDGGVDPGRLGAAHDIDDFAAQGRVRELFVHTKIAARGASLRLSPPQHFQVLDFIPDEEEAVNPYLAEWGAFGEWRDVFPPLKGTFRVRYQAREEHDHEGTHVEYDGFQPLGNGQREDEAALGGDMRDKRSHRASWTFPGTSATEKPGDKNVEFRDAYLLVQATVGETDRDPAWVETSIKALIQEDLVEEEEPEPAADDDTIMPAEHMPTIVDKHEPNRGGERRDSRENKSRDTALETNRLLLAVEAPSTLAVPVQMPRRYLPAASLCNDSALVWPTAFTLHLKNSSSIYSVVGKLNELLQPKHGEDDRPQLCTVNVTLLSSVKAAAFTTGGVAAIGKNNTKSAPKRMPSHVVILLGFLGGACILFASVMAVRRFMAPAGPPRSSRRSSVHHDPTTIETQITELDDSTSLGVKSSALRHSSRSRTNSLTGVNLAILPPARLSAGNIAATPGAGGLGGSLSGTRTMPQHYRSSSSLPTDLAAFGHGRSSSMPLHGGAGLLPSRKQSIESINISNSGALGASLGSDMEHPEAAERTGKGESRRN
Sbjct: 1 MAYRAIVTFLLLEVSLNHAWGMQDTKTTTLLSAKPSTLDKEPFQDVTSADGFLRVDLTVAPWLEQGAVSGKAALFHQGVKSSLAPILRAFPGDTVQIRVRSELPNNVENGRDDATSLALHGIRLTAATDKGGLHSRLAGPQLAIHTFTVDKQHAPGLHWYSVGGGLGFMGALYVLSTDADAASQSKVPGSRLLVFESQGAGSTYFINGDSPAPLHVRSGESQQLDLAYASGPDLLEIVAGKGCELELLAIDGVDLNEPRDVDYVPLVSRQRARVALTCQESGESALLARPRAHGIGSKAPKGQDSAQDGMQRLLAVSVFKAKGLPFSRLPRVVAPRPFKDTALAGATYLKDLASENSVSNSCTISLYPCHGKAFCSADRSACLTFPSISDGGVDPGRLGAAHDIDDFAAQGRVRELFVHTKIAARGASLRLSPPQHFQVLDFIPDEEEAVNPYLAEWGAFGEWRDVFPPLKGTFRVRYQAREEHDHEGTHVEYDGFQPLGNGQREDEAALGGDMRDKRSHRASWTFPGTSATEKPGDKNVEFRDAYLLVQATVGETDRDPAWVETSIKALIQEDLVEEEEPEPAADDDTIMPAEHMPTIVDKHEPNRGGERRDSRENKSRDTALETNRLLLAVEAPSTLAVPVQMPRRYLPAASLCNDSALVWPTAFTLHLKNSSSIYSVVGKLNELLQPKHGEDDRPQLCTVNVTLLSSVKAAAFTTGGVAAIGKNNTKSAPKRMPSHVVILLGFLGGACILFASVMAVRRFMAPAGPPRSSRRSSVHHDPTTIETQITELDDSTSLGVKSSALRHSSRSRTNSLTGVNLAILPPARLSAGNIAATPGAGGLGGSLSGTRTMPQHYRSSSSLPTDLAAFGHGRSSSMPLHGGAGLLPSRKQSIESINISNSGALGASLGSDMEHPEAAERTGKGESRRN 930
BLAST of EWM26216.1 vs. NCBI_GenBank
Match: gi|1094515520|emb|SEN82027.1| (Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cryobacterium luteum]) HSP 1 Score: 66.6254 bits (161), Expect = 1.330e-7 Identity = 81/335 (24.18%), Postives = 136/335 (40.60%), Query Frame = 0
Query: 45 DVTSADGFLRVDLTVAPWLEQGAVSGKA--ALFHQGVKSSLAPILRAFPGDTVQIRVRSELPNNVENGRDDATSLALHGIRLTAATDKGGLHSRLAGPQLAIHTFTVDKQHAPGLHWY----------SVGGGLGFMGALYVLSTDADAASQSKVPGSRLLVFESQGA--------------GSTYFINGDSPAPLHVRSGESQQLDLAYASGPDLLEIVAGKGCELELLAIDGVDLNEPRDVDYVPLVSRQRARVALTCQESGESALLARPRAHGIGSKAPKGQDSAQDGMQRLLAVSVFKAKGL---PFSRLPRVVAPRPFKDTALAGATYLK 350
++ S +G L V L +P +Q +++G+ AL + G PG T+++R L N+ NG D ++L +HG+ ++ + + + + + + H PG++WY V GGL GA+ V + A++ +V + F+S G G +NG L GE ++ + A L + G +L LL ID PRDVD + L RA + +T +G S L RA A G A+ +A++ F G F+ +P +APR + A+ L+
Sbjct: 52 EMRSTNGMLTVALESSP--QQVSIAGRTVRALSYNG----------GVPGPTLRLRAGDTLNVNLRNGLTDPSNLHVHGLHVSPENNGDNMFVMVDPGGSFDYQYKLPANHPPGVYWYHPHHHGYVADQVFGGL--YGAIIVEDPEEIPATRERVVVISDMTFDSSGTISAATEMEKMSGREGELVLVNGQLSPALSASPGERERWRVINACTSRYLRLRL-DGQQLTLLGIDSGRFESPRDVDEIVLAPGNRADLLVTAL-AGTSTL----RALRYNRGASGGMMGARTTSSADVALATFAVAGTDTAAFTAVPEQLAPRDLRSAAVTARRELR 366 The following BLAST results are available for this feature:
BLAST of EWM26216.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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