EWM26246.1, cds4454 (CDS) Nannochloropsis gaditana

Overview
NameEWM26246.1
Unique Namecds4454
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:652333..653046 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26246.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100025g24.7537.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:652333..653046 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|585108245|gb|EWM26246.1| (uncharacterized protein Naga_100025g24 [Nannochloropsis gaditana])

HSP 1 Score: 473.396 bits (1217), Expect = 9.109e-169
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query:    1 METTPSLVTAEALSSYLWKRYVSLLSISPLDADANLFPPDCFALPVSSSMPSASTPGRKRKSRPLPRSQPAQPTAEGGANVTEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF 237
            METTPSLVTAEALSSYLWKRYVSLLSISPLDADANLFPPDCFALPVSSSMPSASTPGRKRKSRPLPRSQPAQPTAEGGANVTEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF
Sbjct:    1 METTPSLVTAEALSSYLWKRYVSLLSISPLDADANLFPPDCFALPVSSSMPSASTPGRKRKSRPLPRSQPAQPTAEGGANVTEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF 237          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|1183348220|gb|ORX76731.1| (hypothetical protein BCR32DRAFT_248500 [Anaeromyces robustus])

HSP 1 Score: 95.9005 bits (237), Expect = 9.826e-21
Identity = 49/148 (33.11%), Postives = 85/148 (57.43%), Query Frame = 0
Query:   79 ANVTEFLQSAFPQLQMIATD--KSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARS 224
            +N++ F++  +P  +       K     G P V++++ SA+RA E+ + L    +  K  KLF+KH+KV  QVE L      +AVGTPNRL KL E  +L++++  L+V+D +FKDSK  ++  +P +  D   F++ H +  +  ++
Sbjct:   59 SNISSFVKQVYPNWKKHLGKPPKETDYHGQPSVLVVTQSAIRAVEVIRALSEFSKYCKVGKLFSKHMKVKDQVEFLNQSVVKIAVGTPNRLIKLAENESLNMNKLDLLVIDYTFKDSKNRNIFEIPEIRKDLLTFIKQHCINRIKEKT 206          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|1183385243|gb|ORY10523.1| (hypothetical protein LY90DRAFT_465239 [Neocallimastix californiae])

HSP 1 Score: 97.4413 bits (241), Expect = 3.551e-20
Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 0
Query:   79 ANVTEFLQSAFPQLQMIATD--KSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF 237
            +N++ F++  +P  +       K    KG P V++++ SA+RA E+ + L    +  K  KLF+KH+KV  QVE L      +AVGTPNRL KL E  +L +++  L+V+D +FKDSK  ++  +P +  D   F++ H +  +  ++        ++ALF
Sbjct:  197 SNLSSFIKQVYPNWKKNLGKPPKESDYKGQPSVLVVTQSAIRAVEVIRSLNEFSKYCKVGKLFSKHMKVKEQVEYLSKSVVKIAVGTPNRLIKLAENESLDMNKLDLLVIDYTFKDSKNRNIFEIPEIRKDLLAFIKQHCINRIKDQTQ-------KIALF 350          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|673020716|ref|XP_008864319.1| (hypothetical protein H310_02545 [Aphanomyces invadans] >gi|574479250|gb|ETW06244.1| hypothetical protein H310_02545 [Aphanomyces invadans])

HSP 1 Score: 94.3597 bits (233), Expect = 1.883e-19
Identity = 60/158 (37.97%), Postives = 91/158 (57.59%), Query Frame = 0
Query:   80 NVTEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF 237
            +++ FL+S  P+ +++   K  +    P +V+L SSA+RA E+ K   I + +   AKLF KH K+  QVE+L+  FH +A+GTP R+  LLEM  LSL     VV+D   +DSK   +L L   A DT   +RDH+L  +A        ++L +AL+
Sbjct:  140 SLSRFLRSICPKWKLLFKGKGIKGDCSPILVILCSSALRAVEVGK--AIAVFHCHVAKLFGKHFKLTEQVEMLK-RFHPIAIGTPGRIKALLEMKGLSLKHTTHVVVDM-HRDSKQMSILELKDTAKDTIDIIRDHMLVPLAT-------EKLSIALY 286          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|698820639|ref|XP_009843348.1| (hypothetical protein H257_16577 [Aphanomyces astaci] >gi|574101621|gb|ETV67183.1| hypothetical protein H257_16577 [Aphanomyces astaci])

HSP 1 Score: 93.2041 bits (230), Expect = 5.476e-19
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = 0
Query:   80 NVTEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF 237
            +++ FL+S  P+ +++   K  +++  P ++++ SSA+RA E+ K   I + +   AKLF KHLK+  QV++L+  FH +A+GTP R+  LLEM ALSL     VV+D   +DSK   +L L   A DT   LR+H+L  +A++       +L +AL+
Sbjct:  145 SLSRFLRSICPKWKLLFKGKGIKDQCSPILLIVCSSALRAVEVGK--AIAVFHCHVAKLFGKHLKLTEQVDMLK-HFHPIAIGTPGRIKTLLEMKALSLAHTTHVVVDM-HRDSKQMSILELKDTAKDTIDVLREHLLVPLASQ-------KLSIALY 291          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|669162848|ref|XP_008616986.1| (hypothetical protein SDRG_12682 [Saprolegnia diclina VS20] >gi|530731440|gb|EQC29682.1| hypothetical protein SDRG_12682 [Saprolegnia diclina VS20])

HSP 1 Score: 92.0485 bits (227), Expect = 1.142e-18
Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = 0
Query:   82 TEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF 237
            T FL++  P+ + +   K  ++K  P ++++ SSA+RA E+ K   I       AKLFAKHLK+  QVE+L+  FH +A+GTP R+  LLEM ALSL+    VVLD    DSK   LL L   + DT   +R+ +L  +AA       ++L +AL+
Sbjct:  130 TRFLRALCPEWKFLFRGKGIKDKRSPLLLIVCSSALRAVEIGK--AIASFKCHVAKLFAKHLKLEEQVEMLK-RFHPIAIGTPGRIKTLLEMKALSLECTSHVVLDMHL-DSKNMSLLELKDTSKDTIDCIRESLLPRIAA-------NKLSIALY 274          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|813198368|ref|XP_012208767.1| (hypothetical protein SPRG_14261 [Saprolegnia parasitica CBS 223.65] >gi|641526111|gb|KDO20503.1| hypothetical protein SPRG_14261 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 91.2781 bits (225), Expect = 1.841e-18
Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = 0
Query:   82 TEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARSSSEARDRLRLALF 237
            T FL++  P+ + +   K  ++K  P ++++ SSA+RA E+ K   I       AKLFAKHLK+  QVE+L+  FH +A+GTP R+  LLEM ALSL+    VVLD    DSK   LL L   + DT   +R+ +L  +AA       ++L +AL+
Sbjct:  129 TRFLRALCPEWKFLFRGKGIKDKRSPLLLIVCSSALRAVEIGK--AIASFKCHVAKLFAKHLKLEEQVEMLK-RFHPIAIGTPGRIKTLLEMKALSLECTSHVVLDMHL-DSKNMSLLELKDTSKDTIDCIRESLLPRIAA-------NKLSVALY 273          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|1183329484|gb|ORX59228.1| (hypothetical protein BCR36DRAFT_343073 [Piromyces finnis])

HSP 1 Score: 90.8929 bits (224), Expect = 5.898e-18
Identity = 47/148 (31.76%), Postives = 85/148 (57.43%), Query Frame = 0
Query:   79 ANVTEFLQSAFPQLQMIATD--KSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVLKAMAARS 224
             N++ +++  +P  +       K     G P V++++ SA+RA E+ + L    +  K  KLF+KH+KV  QVE L      +AVGTPNRL KL E  +L++++  L+V+D ++KDSK  ++  +P +  D  +F++ + +  +  +S
Sbjct:  185 TNLSSYIKQVYPNWKKHLGKPPKESDYHGQPSVLVVTQSAIRAVEVIRALSEFSKYCKVGKLFSKHMKVKEQVEFLSKSVVKIAVGTPNRLIKLAENDSLNMNKLDLLVIDYNYKDSKNRNIFEIPEIRKDLLIFIKQYCIDRIKDQS 332          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|1175835701|ref|XP_020571426.1| (protein CMSS1 [Phalaenopsis equestris])

HSP 1 Score: 89.3521 bits (220), Expect = 1.534e-17
Identity = 57/154 (37.01%), Postives = 94/154 (61.04%), Query Frame = 0
Query:   68 SQPAQPTAEGGANVTEFLQSAFPQ-LQMIATD----KSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHV 216
            S+ A   AE   N+ + ++ AF +  + +  D    +   E G P V+++S SA+ + EL + L++  +N + AKLFAKH+KV  Q+E+L+S  + +A GTP+R+ KL++M AL L R  ++VLD   +D KG+ LL LP ++A+     R H+
Sbjct:  121 SKDANQDAE---NINKHIKDAFGESWKEVLCDGNLFEGTIEPGSPAVLIISVSALSSLELLRGLKVYTKNCRPAKLFAKHMKVEEQIELLRSRVN-IASGTPSRIKKLIDMDALMLSRLAIIVLDIR-RDVKGYSLLTLPQVSAEFWNLYRAHL 269          
BLAST of EWM26246.1 vs. NCBI_GenBank
Match: gi|1126170581|ref|XP_019617293.1| (PREDICTED: protein CMSS1-like [Branchiostoma belcheri])

HSP 1 Score: 88.9669 bits (219), Expect = 1.843e-17
Identity = 51/138 (36.96%), Postives = 75/138 (54.35%), Query Frame = 0
Query:   80 NVTEFLQSAFPQLQMIATDKSQREKGMPFVVLLSSSAVRANELAKDLRIKLRNLKTAKLFAKHLKVPAQVEVLQSEFHALAVGTPNRLSKLLEMGALSLDRCRLVVLDTSFKDSKGFDLLHLPGLAADTALFLRDHVL 217
            N++ +LQ   P    +        KG P V++L+ +A RA +L +D        ++ KLFAKH+KV  QVE L  +   LAVGTP R++ L+E  AL LD  R VVLD +++D K   L  +P +  D     R H++
Sbjct:  139 NISSYLQEVVPDWSSLVD--PHEAKGAPLVIVLTGAAKRAVDLNRDSTTFRGKARSIKLFAKHIKVQDQVEQLSKQVVHLAVGTPARVATLVEEDALRLDHVRCVVLDWTYRDVKLRRLCDIPEVRGDLFQLFRKHLI 274          
The following BLAST results are available for this feature:
BLAST of EWM26246.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108245|gb|EWM26246.1|9.109e-169100.00uncharacterized protein Naga_100025g24 [Nannochlor... [more]
gi|1183348220|gb|ORX76731.1|9.826e-2133.11hypothetical protein BCR32DRAFT_248500 [Anaeromyce... [more]
gi|1183385243|gb|ORY10523.1|3.551e-2032.92hypothetical protein LY90DRAFT_465239 [Neocallimas... [more]
gi|673020716|ref|XP_008864319.1|1.883e-1937.97hypothetical protein H310_02545 [Aphanomyces invad... [more]
gi|698820639|ref|XP_009843348.1|5.476e-1937.34hypothetical protein H257_16577 [Aphanomyces astac... [more]
gi|669162848|ref|XP_008616986.1|1.142e-1839.74hypothetical protein SDRG_12682 [Saprolegnia dicli... [more]
gi|813198368|ref|XP_012208767.1|1.841e-1839.74hypothetical protein SPRG_14261 [Saprolegnia paras... [more]
gi|1183329484|gb|ORX59228.1|5.898e-1831.76hypothetical protein BCR36DRAFT_343073 [Piromyces ... [more]
gi|1175835701|ref|XP_020571426.1|1.534e-1737.01protein CMSS1 [Phalaenopsis equestris][more]
gi|1126170581|ref|XP_019617293.1|1.843e-1736.96PREDICTED: protein CMSS1-like [Branchiostoma belch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4465rna4465Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications