EWM26211.1, cds4440 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|585108210|gb|EWM26211.1| (molecular chaperone [Nannochloropsis gaditana]) HSP 1 Score: 593.193 bits (1528), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MSRDCAVASQYLGVPSRSPPSKTCSQNPELHPSDQQQRMHVRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDTKSQQNIIYKLNSDRERQCEGLHGRSDTSPSRKRKYGSTAASTPGKSASPKSSTTSVRKSSKSFAEVLREWENFEKQYVEELRNKQMSVEAQARKELRRSRREDVEEQQAAERRTLLAHLLANVQDDSEDDVPTALHTREGQEREIEEGLRTPRPRNTWQTFLRGRKRGRRQERVEENGARKQGI 288 MSRDCAVASQYLGVPSRSPPSKTCSQNPELHPSDQQQRMHVRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDTKSQQNIIYKLNSDRERQCEGLHGRSDTSPSRKRKYGSTAASTPGKSASPKSSTTSVRKSSKSFAEVLREWENFEKQYVEELRNKQMSVEAQARKELRRSRREDVEEQQAAERRTLLAHLLANVQDDSEDDVPTALHTREGQEREIEEGLRTPRPRNTWQTFLRGRKRGRRQERVEENGARKQGI Sbjct: 1 MSRDCAVASQYLGVPSRSPPSKTCSQNPELHPSDQQQRMHVRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDTKSQQNIIYKLNSDRERQCEGLHGRSDTSPSRKRKYGSTAASTPGKSASPKSSTTSVRKSSKSFAEVLREWENFEKQYVEELRNKQMSVEAQARKELRRSRREDVEEQQAAERRTLLAHLLANVQDDSEDDVPTALHTREGQEREIEEGLRTPRPRNTWQTFLRGRKRGRRQERVEENGARKQGI 288
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|676382589|ref|XP_009034573.1| (hypothetical protein AURANDRAFT_62223 [Aureococcus anophagefferens] >gi|323455144|gb|EGB11013.1| hypothetical protein AURANDRAFT_62223 [Aureococcus anophagefferens]) HSP 1 Score: 70.0922 bits (170), Expect = 9.843e-10 Identity = 32/71 (45.07%), Postives = 51/71 (71.83%), Query Frame = 0 Query: 41 VRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDTKSQQNII 111 + R+L+A+N FEV+ +PV + A V+ YRK AL +HPDK + + ++AF RLSEA+EAL D ++Q++ + Sbjct: 864 IERILKARNHFEVMDIPVCPCAPAIVKKLYRKLALKVHPDKCSHADGERAFKRLSEAHEALSDERAQRDAL 934
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|1004136866|gb|KXZ44898.1| (hypothetical protein GPECTOR_61g851 [Gonium pectorale]) HSP 1 Score: 63.929 bits (154), Expect = 1.478e-8 Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 41 VRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEAL 101 VRRVLQA + +EVLQLPV S+ VR AYR+ A LHPDK AQ+AFIR + AY AL Sbjct: 136 VRRVLQAASDYEVLQLPV-GSTAVEVRRAYRRLAASLHPDKCREEGAQQAFIRATSAYNAL 195
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|302854479|ref|XP_002958747.1| (hypothetical protein VOLCADRAFT_108284 [Volvox carteri f. nagariensis] >gi|300255922|gb|EFJ40203.1| hypothetical protein VOLCADRAFT_108284 [Volvox carteri f. nagariensis]) HSP 1 Score: 64.3142 bits (155), Expect = 6.506e-8 Identity = 44/109 (40.37%), Postives = 57/109 (52.29%), Query Frame = 0 Query: 41 VRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYE-----------ALRDTKSQQNIIYKLN-------------SDRERQCEGL 125 VRRVL+A + +EVLQLPV S+ A VR AYR+ A LHPDK AQ+AFIR + AY A+ S +N+I++L+ D QC GL Sbjct: 105 VRRVLRAASDYEVLQLPV-GSTAAEVRRAYRRLAACLHPDKCREEGAQEAFIRAAAAYNGLLRRCGGDRSAIATNISTRNLIHQLDLVSVAPQQKAIRKPDTPDQCGGL 212
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|1129190306|gb|OLP95565.1| (Chaperone protein dnaJ 49 [Symbiodinium microadriaticum]) HSP 1 Score: 63.929 bits (154), Expect = 1.110e-7 Identity = 32/86 (37.21%), Postives = 54/86 (62.79%), Query Frame = 0 Query: 41 VRRVLQAQNAFEVLQLPV-MCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDTKSQQNIIY---KLNSDRERQC 122 + RVL+++N FEVL LP + + + ++ AYRK +L +HPDKN ++ AF ++ A+E L DT+ Q+ +++ KL D E + Sbjct: 216 IERVLESRNDFEVLDLPPQLITDLSILKKAYRKISLSVHPDKNKHPQSADAFRKVYGAFETLMDTRQQRRLLWILGKLTPDMEEKV 301
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|301113810|ref|XP_002998675.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262111976|gb|EEY70028.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 60.4622 bits (145), Expect = 1.833e-7 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0 Query: 41 VRRVLQAQNAFEVLQL------PVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDTKSQQNIIYKLNS 116 V R+L +EVL+L PV + VR Y++ A+ +HPDKN +A+ AF RLSEAYE L D SQ+N + +L + Sbjct: 9 VSRILSCNTHYEVLKLGLPDHAPVFVDA-QQVRRRYKELAIRVHPDKNPTADAEAAFKRLSEAYECLVDEASQRNYLQRLRA 89
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|551611249|ref|XP_005786717.1| (hypothetical protein EMIHUDRAFT_352279, partial [Emiliania huxleyi CCMP1516] >gi|485640019|gb|EOD34288.1| hypothetical protein EMIHUDRAFT_352279, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 58.5362 bits (140), Expect = 4.376e-7 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0 Query: 41 VRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDT 104 V R+LQA++ +EVL LP +R A ALL+HPDKN + +A +AF R+ AYE L T Sbjct: 8 VDRILQARDLYEVLNLPAFTDDVEEIRRARNDCALLVHPDKNDSPDASEAFKRVQGAYEVLMST 71
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|294878645|ref|XP_002768440.1| (molecular chaperone DnaJ, putative [Perkinsus marinus ATCC 50983] >gi|239870868|gb|EER01158.1| molecular chaperone DnaJ, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 60.8474 bits (146), Expect = 5.474e-7 Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 33 SDQQQRMHVRRVLQAQNAFEVLQLPVMCSSF---ATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRD 103 +D+Q R+ V+RVL+ Q+ +++LQ+ S A V+ AYRK AL LHPDKN+A A++AF ++S+A++ L D Sbjct: 106 TDEQNRL-VQRVLRTQDYYQILQIDKNDGSNDVDAKVKKAYRKLALKLHPDKNSAPGAEEAFKKVSKAFQCLSD 178
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|294876661|ref|XP_002767739.1| (molecular chaperone DnaJ, putative [Perkinsus marinus ATCC 50983] >gi|239869584|gb|EER00457.1| molecular chaperone DnaJ, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 60.4622 bits (145), Expect = 9.156e-7 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 0 Query: 33 SDQQQRMHVRRVLQAQNAFEVLQLPVMCSSF---ATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRD 103 +D Q R+ V+RVL+ Q+ +++LQ+ S A V+ AYRK AL LHPDKN+A A++AF ++S+A++ L D Sbjct: 106 TDDQNRL-VQRVLRTQDYYQILQIDKNDGSNDVDAKVKKAYRKLALKLHPDKNSAPGAEEAFKKVSKAFQCLSD 178
BLAST of EWM26211.1 vs. NCBI_GenBank
Match: gi|510911174|ref|XP_004833725.1| (DnaJ domain containing protein [Theileria equi] >gi|428673360|gb|EKX74273.1| DnaJ domain containing protein [Theileria equi strain WA]) HSP 1 Score: 60.077 bits (144), Expect = 9.709e-7 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 0 Query: 27 NPELHPSDQQQRMHVRRVLQAQNAFEVLQLPVMCSSFATVRTAYRKFALLLHPDKNAAHEAQKAFIRLSEAYEALRDTKSQQN 109 NP+ PS+ + RRVL A+ +EVL L S T++ +Y+K AL LHPDKN +H A +AF ++S A++ L + KS+++ Sbjct: 89 NPDTTPSEHDKL--CRRVLSAKTYYEVL-LVAREDSVDTIKRSYKKLALKLHPDKNPSHLASEAFKKVSTAFQCLTNPKSREH 168 The following BLAST results are available for this feature:
BLAST of EWM26211.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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