EWM26237.1, cds4439 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|585108236|gb|EWM26237.1| (acyl- synthetase family member mitochondrial [Nannochloropsis gaditana]) HSP 1 Score: 591.652 bits (1524), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 Query: 1 MLPRQALRNVSRNLVRNKPTSTSSTTRSCTMPMARIGRSHDARLLLQQSVRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVTADGSRGAMLSHADVLSKNAWPVVSGVLSKKLVNVAAAAAGGSH 291 MLPRQALRNVSRNLVRNKPTSTSSTTRSCTMPMARIGRSHDARLLLQQSVRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVTADGSRGAMLSHADVLSKNAWPVVSGVLSKKLVNVAAAAAGGSH Sbjct: 1 MLPRQALRNVSRNLVRNKPTSTSSTTRSCTMPMARIGRSHDARLLLQQSVRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVTADGSRGAMLSHADVLSKNAWPVVSGVLSKKLVNVAAAAAGGSH 291
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|298712921|emb|CBJ26823.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 146.362 bits (368), Expect = 1.309e-38 Identity = 83/238 (34.87%), Postives = 134/238 (56.30%), Query Frame = 0 Query: 51 RSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNI-SKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVTADGS-----RGAMLSHADVLSKNAWPVVSGVLSKKLVNV 282 R + + + +D++ EIP+KEA++Y KG KWTR+D+K ++ LA G L+LG K GDT+A W+PE ++ HV Q AA+ G+ +A +D + S +EK L E+ A ++ + L +PEL Y G+PFRS K P L+ +HTG + + + + L P SPL + + +S PL + ++G+ +G LSHA+V+S +WP ++ +L K+ V V Sbjct: 54 RFLGGLASKVDKVLAEIPMKEAVRYKKGNLKWTRSDVKSHSEALACGLLELGCKAGDTMAMWLPE-CSEKHVAQLAAARIGMVVAEVDPKLGSAAAVEKILEESGAAVVLV-----EESVVPSLIEAVPELRHYSTDSGLPFRSAKLPSLRLCIHTGLEREAALLHFRSALL-YTPPVSPLAQVNGQIKESAPLHT-IFSEGTGGTPEKGKTLSHAEVVSLASWPTIAAILKKEYVEV 283
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|1214710398|gb|OWZ21492.1| (hypothetical protein PHMEG_0003957 [Phytophthora megakarya]) HSP 1 Score: 130.954 bits (328), Expect = 2.022e-32 Identity = 75/221 (33.94%), Postives = 134/221 (60.63%), Query Frame = 0 Query: 50 VRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISK-EGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVT----ADGSRGAMLSHADVLSK 265 VR++++VGA+L+E +P KEAL+ K +W+ ++K A D LA GFLDL + GD +A W+P + A+ +TQ AA+AG+TLA+++ +S+ + L L ++ A L++ P + + T ++Q + PELA++ + V FR + F HL ++ T ++ ++G+ NL + + PE L A+ ++SD TPL + + + + A+L+H D+L + Sbjct: 16 VRTVSTVGAILNEAVDRLPHKEALRSVKQDVRWSFKELKAAVDELANGFLDLQFQSGDVVAVWLP-NSAENVLTQLAAARAGLTLAVIEPEVSEAKELAFILEDSRASGLVFEPKQAGRNQTQVVQGLFPELATFRERKEV-FRPKHFRHLHSVITTSWEPVEGMINLNGMMVN-SPEPYALQAVTKMLSDKTPLAVTYSKVQGQNPKKSAVLTHGDLLKR 233
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|953495740|emb|CEG42636.1| (amp-binding protein [Plasmopara halstedii]) HSP 1 Score: 130.183 bits (326), Expect = 3.050e-32 Identity = 78/236 (33.05%), Postives = 133/236 (56.36%), Query Frame = 0 Query: 36 IGRSHDARLL-LQQSVRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISK-EGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVT----ADGSRGAMLSHADVLSK 265 +G H RL+ + R+ ++VGA LDE +P KEAL+ K +W+ ++ LA GFLDL + GD +A W+P + ++ VTQ AA+AG+TLA+++ +S+ E L L ++ A LI+ P + T ++Q + PELA++ V FR + F HL ++ TG+D ++G+ NL + + PE L A+ ++++ TPL + + + A+L+H D+L + Sbjct: 2 LGLVHSKRLVRIPLCFRAASTVGATLDEAVNRLPHKEALRSIKQDVRWSFKELNTVVSELANGFLDLQFRCGDVVALWLPNNVENV-VTQLAAARAGLTLALIEPQVSEAEELAYILQDSEASGLIFEPKHAGRNQTKIVQDLFPELATFRQRKEV-FRPKNFRHLHTVITTGWDPVEGMLNLNGMMVN-SPEPHILKAVSKMLNEKTPLVFTYSQTKGQNPKKSALLTHGDLLQR 234
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|219119466|ref|XP_002180493.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407966|gb|EEC47901.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 127.102 bits (318), Expect = 3.070e-31 Identity = 93/278 (33.45%), Postives = 141/278 (50.72%), Query Frame = 0 Query: 18 KPTSTSSTTRSCTMPMARIGRSHDARLLLQQSVRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNI-------SKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDI--IQGVENLKHIFLP---LEPERSPLPAIQALVSDSTPLF--LPVTADG---SRGAMLSHADVLSKNAWPVVSGVLSKK 278 KP + +++R+ T+ AR R+ L S A VGA L +T E P + ++Y W+ ++ +D LA G ++ L+PGD + +W+PE ++ V QF AK+G+ L LD + +KE L K L T A L+ + +L SVIPEL +D LG+PF + +FPHL++ +HTGFD +G L+H+ +P LE P A +S TPL L + ADG G LS+ V+ WP + VL+K+ Sbjct: 4 KPLLSRASSRAATL-AARSSRALAPTTRLASRSLSTA-VGAQLQALTTEYPHLDVVRYEHKNRVWSLQHVQYYSDALAIGLMENNLQPGDVVLSWLPEHFSEQMVLQFACAKSGLVLYTLDPMLATTDREKAKEALAKALEITKANVLVSQEAGNDVNYISLGHSVIPELRIFDFSLGIPFITPRFPHLRFPIHTGFDQDDKEGWLPLRHMVVPSGNLETFVDP-----AKISKDTPLAGELLIGADGVPTGVGKTLSNEQVVKNKIWPTFAKVLAKE 274
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|301113572|ref|XP_002998556.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262111857|gb|EEY69909.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 125.946 bits (315), Expect = 1.421e-30 Identity = 72/221 (32.58%), Postives = 128/221 (57.92%), Query Frame = 0 Query: 50 VRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISK-EGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVT----ADGSRGAMLSHADVLSK 265 VR+ ++VGA LDE +P KEAL+ +W+ ++ + D LA GFLDL + GD +A W+P ++ +T AA+AG+TLA+++ +SK E L L ++ A L++ P + + T ++Q++ PELA++ + + V FR + F HL ++ T + ++G+ NL + + PE + A+ ++D TPL + + + + A+L+H DVL + Sbjct: 17 VRAASTVGATLDEAVARLPHKEALRSVTQDIRWSFKELNASVDELANGFLDLQFQRGDVVAVWLPNSVENV-LTHLAAARAGLTLAVIEPEVSKAEELAFILQDSKASGLVFEPKQAGRNQTEIVQNLFPELATFRERMEV-FRPKNFRHLHSVITTSWKPVEGMVNLNGMMVN-SPEPYAMKAVTKTLNDKTPLAVTYSKVEGQNPKKSAVLTHGDVLKR 234
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|695447376|ref|XP_009534721.1| (hypothetical protein PHYSODRAFT_355815 [Phytophthora sojae] >gi|348670038|gb|EGZ09860.1| hypothetical protein PHYSODRAFT_355815 [Phytophthora sojae]) HSP 1 Score: 124.79 bits (312), Expect = 3.608e-30 Identity = 72/217 (33.18%), Postives = 129/217 (59.45%), Query Frame = 0 Query: 54 ASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISK-EGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVT----ADGSRGAMLSHADVLSK 265 ++VGA LDE +P KEAL+ K +W+ ++ A D LA+GFLDL + GD +A W+P + A+ +TQ AA+AG+TLA+++ +S+ E L L ++ A L++ P + + T ++Q + PELA++ + + V FR ++F HL ++ T ++ ++G+ NL + + E + A+ +SD TPL + + + + A+L+H D+L + Sbjct: 21 STVGAALDEAVARLPHKEALRSVKQDVRWSFKELNAAVDELASGFLDLQFRAGDVVALWLP-NSAENVLTQLAAARAGLTLAVIEPEVSQAEELAFILHDSQAAGLVFEPKQAGRNQTEIVQGLFPELATFRERMEV-FRPKQFRHLHSVITTSWEPVEGMINLNGMMVN-NAEPYAMKAVTKTLSDKTPLAVTYSKVEGQNPKKSAVLTHGDLLKR 234
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|675200173|ref|XP_008908971.1| (hypothetical protein PPTG_13260 [Phytophthora parasitica INRA-310] >gi|567956618|gb|ETK82238.1| hypothetical protein L915_12349 [Phytophthora parasitica] >gi|567985286|gb|ETL35631.1| hypothetical protein L916_12265 [Phytophthora parasitica] >gi|568014692|gb|ETL88869.1| hypothetical protein L917_12105 [Phytophthora parasitica] >gi|568091081|gb|ETN05907.1| hypothetical protein PPTG_13260 [Phytophthora parasitica INRA-310] >gi|570322876|gb|ETO70824.1| hypothetical protein F444_12736 [Phytophthora parasitica P1976] >gi|570322896|gb|ETO70844.1| hypothetical protein F444_12724 [Phytophthora parasitica P1976] >gi|570946699|gb|ETP11956.1| hypothetical protein F441_12588 [Phytophthora parasitica CJ01A1] >gi|570979005|gb|ETP40074.1| hypothetical protein F442_12536 [Phytophthora parasitica P10297] >gi|970633909|gb|KUF79366.1| Acyl-CoA synthetase family member 2 [Phytophthora nicotianae]) HSP 1 Score: 124.02 bits (310), Expect = 7.828e-30 Identity = 70/221 (31.67%), Postives = 129/221 (58.37%), Query Frame = 0 Query: 50 VRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISK-EGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVT----ADGSRGAMLSHADVLSK 265 VR+ ++VGA LDE +P KEAL+ +W+ ++ + D LA GFLDL + GD +A W+P ++ +TQ AA+AG+TLA+++ +S+ E L L ++ A L++ P + + T ++Q++ PELA++ + + V FR + F HL ++ T ++ ++G+ NL + + PE + A+ ++D TPL + + + + +L+H D+L + Sbjct: 17 VRAASTVGATLDEAVARLPHKEALRSVTQDIRWSFKELNASVDELANGFLDLQFQRGDVVAVWLPNSVENV-LTQLAAARAGLTLAVIEPEVSEAEELAFILQDSKASGLVFEPKQAGRNQTEIVQNLFPELATFRERMEV-FRPKNFRHLHSVITTSWEPVEGMINLNGMMVN-SPEPYAMKAVTKSLNDKTPLAVTYSKVEGQNPKKSTVLTHGDLLKR 234
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|566019310|gb|ETI42221.1| (hypothetical protein F443_12619 [Phytophthora parasitica P1569] >gi|568044939|gb|ETM42110.1| hypothetical protein L914_12189 [Phytophthora parasitica]) HSP 1 Score: 124.02 bits (310), Expect = 7.910e-30 Identity = 70/221 (31.67%), Postives = 129/221 (58.37%), Query Frame = 0 Query: 50 VRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNISK-EGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVT----ADGSRGAMLSHADVLSK 265 VR+ ++VGA LDE +P KEAL+ +W+ ++ + D LA GFLDL + GD +A W+P ++ +TQ AA+AG+TLA+++ +S+ E L L ++ A L++ P + + T ++Q++ PELA++ + + V FR + F HL ++ T ++ ++G+ NL + + PE + A+ ++D TPL + + + + +L+H D+L + Sbjct: 17 VRAASTVGATLDEAVARLPHKEALRSVTQDIRWSFKELNASVDELANGFLDLQFQRGDVVAVWLPNSVENV-LTQLAAARAGLTLAVIEPEVSEAEELAFILQDSKASGLVFEPKQAGRNQTEIVQNLFPELATFRERMEV-FRPKNFRHLHSVITTSWEPVEGMINLNGMMVN-SPEPYAMKAVTKSLNDKTPLAVTYSKVEGQNPKKSTVLTHGDLLKR 234
BLAST of EWM26237.1 vs. NCBI_GenBank
Match: gi|223994687|ref|XP_002287027.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978342|gb|EED96668.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 119.783 bits (299), Expect = 3.627e-28 Identity = 91/300 (30.33%), Postives = 138/300 (46.00%), Query Frame = 0 Query: 4 RQALRNVSRNLVRNKPTSTSSTTRSCTMPMARIGRSHDARLLLQQSVRSMASV--GALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWN---------ISKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDII--QGVENLKHIFLPLEPERSPLPAIQALVSD-STPLF--LPVTADG---SRGAMLSHADVLSKNAWPVVSGVLSKKLVNVAA 284 +Q +R+ S VR+ +T+ S T A + R RS+A+V G L + + P E ++Y KWT + +D LA G +D GL+PGD + +W+P A+ H+ QF +KAG L LD N SK L K L TNA L + L + VIPE +D G+PF + ++PHL++ VHTG+ I +G+ KH +P S L D TPL L + DG G +L++ +V AWP + +L+++ + Sbjct: 22 QQQVRSASFLGVRSLAAATNGRGASPTGSTAAVTR------------RSVATVSAGDALARLATDHPHVEVIRYEHKNVKWTLKHVNYYSDALACGLVDAGLQPGDVVLSWLPLHFAEQHILQFACSKAGFLLYHLDPNPELAKSNPEQSKAALAKALELTNANVLFTQEAGDDVNYITLTEGVIPETRIFDFANGMPFFTPRYPHLRFPVHTGYSITDKEGMYAFKHFLVPSNNLDSLLRDTGCKELDGKTPLLGELVLGEDGIPTKTGKVLTNEEVFKSKAWPEFTSILNREYKEIGG 309 The following BLAST results are available for this feature:
BLAST of EWM26237.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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