EWM26209.1, cds4436 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|585108208|gb|EWM26209.1| (Protein kinase, catalytic domain protein [Nannochloropsis gaditana]) HSP 1 Score: 908.672 bits (2347), Expect = 0.000e+0 Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0
Query: 1 MRGAVFLLAILFTFVSFTPSAAAFRPSPLLGEKCFMFSSQPRQDIRLPLRSSTVLFLVNFNWGGFLRPRENDRGRVPEASLDDACQAKALAFSRGAMTASSLISFLKKYAASKKGQTLDKLVEASAQVVPNESRRALLIKTYASLSSSAQASSLTRFTSAPFTSPSVSGFLLGGKYRVISTGSQGPRISSGKSAVLDAVMEDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELMENYDGRGGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAVKRNLLFF 453
MRGAVFLLAILFTFVSFTPSAAAFRPSPLLGEKCFMFSSQPRQDIRLPLRSSTVLFLVNFNWGGFLRPRENDRGRVPEASLDDACQAKALAFSRGAMTASSLISFLKKYAASKKGQTLDKLVEASAQVVPNESRRALLIKTYASLSSSAQASSLTRFTSAPFTSPSVSGFLLGGKYRVISTGSQGPRISSGKSAVLDAVMEDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELMENYDGRGGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAVKRNLLFF
Sbjct: 1 MRGAVFLLAILFTFVSFTPSAAAFRPSPLLGEKCFMFSSQPRQDIRLPLRSSTVLFLVNFNWGGFLRPRENDRGRVPEASLDDACQAKALAFSRGAMTASSLISFLKKYAASKKGQTLDKLVEASAQVVPNESRRALLIKTYASLSSSAQASSLTRFTSAPFTSPSVSGFLLGGKYRVISTGSQGPRISSGKSAVLDAVMEDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELMENYDGRGGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAVKRNLLFF 453
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|1072224027|gb|OEU08779.1| (kinase-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 135.961 bits (341), Expect = 4.989e-32 Identity = 88/268 (32.84%), Postives = 135/268 (50.37%), Query Frame = 0
Query: 183 SQGPRISSGKSAVLDAVMEDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLEL--MENYDGR--GGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAV 446
S+ R +SGKS + +A D+S P+ KLS NL ++ RE +N L G + E + YD R AL +E G DL + + G EL+ C +A + AL LVWTD++ NFV+M +G VK IDLESA+P+ + PVD +PE PPE A+ ++ G + SYDVWSLG+L+L L++ G+ F+G+ +++ L + + + L D + I + L D + R + A +
Sbjct: 119 SKPERSTSGKSNIWEAYKTDDSTGLPVNDAVPICLKLSTNLESISREYDNYRKLNILGIWETGRFVRCYEFFPVAGYDKRYRNQCALAIERGSRDLKSFLNSRGRLENNELRDACTSATQCVQALHNAGLVWTDMKTENFVVMP-NGEVKGIDLESAMPIGDYPVDYSPEACPPEFAAAFLAGEGPYFELETSYDVWSLGMLMLELST-GRGYFDGKNPAQITRMLRDMDETTMTEDLKNLKCDGRLKDLICRCLQRDRRKRPNTAQI 384
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|298705456|emb|CBJ28731.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 135.576 bits (340), Expect = 6.215e-32 Identity = 119/358 (33.24%), Postives = 179/358 (50.00%), Query Frame = 0
Query: 92 FSRGAMTASSLISFLKK-YAASKKGQTLDKLVEASAQVVPNESRRALLIKTYASLSSSAQASSLTRFTSAPFTSPSVSGFLLG-GKYRVISTGSQGPRISSGKSAVLDAVMEDNSVTGSRKGISPLKAKLS--RNLAALQRERNNI--IALRGTGSAAKKSIIEVLELMENYDGRGGHALVMEAGKEDL--VAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRL 441
+++GA+TA L+ L++ G L+ V A+ + P++ +R LL K AS + TR A S G G+ ++S G G RISSGKS++ + V T PLK K++ N+A + E +N+ I R A K + E ++NY+GRG A+VM AG DL +A++ G S+ +L+K A + + K LVWTDL+ NFVL + KAIDLE AVP P TP PP+ + +G TV S+DVWSLG+ +L L + G++ F+G + + + ++ Q VDL V D ++ ++ LL DPK RL
Sbjct: 44 YAQGAITAGDLVRSLERDVVVLIPGCDLEDAVAAALEATPDKRKRNLLSK--ASGGRAIGPGGATRRLGASRGGRSDVTVEGGRGQQYIMSQG--GERISSGKSSIFNGVEVGKEST-------PLKIKVTTRSNVALVAAEVSNLEQIRARNGAGAFSKHFVGFEENIDNYNGRGDFAMVMRAGSTDLRKLAEVN-GGGLSQNKLRKYGAAMASAMRCVHKAGLVWTDLKVDNFVLCE-RDEAKAIDLEGAVPARSGPKSYTPATMPPDFV-IASRGGFAGVTVDRSFDVWSLGMAVLHLYT-GRSYFQGSSDPQTIAAVGQ-PQFTVDLSG---VTDGRTRGLLEGLLNPDPKKRL 382
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|873221633|emb|CEM33053.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 125.946 bits (315), Expect = 1.006e-27 Identity = 121/441 (27.44%), Postives = 197/441 (44.67%), Query Frame = 0
Query: 70 ENDRGRVPEASLDDACQAKALAFSRGAMTASSLISFLKKYAASKKGQTLDK--LVEASAQVVPNESRRALLIKTYASLSSSAQ-ASSLTRFTSAPFTSPSVSGFLLGGKYRVISTGSQGPRISSGKSAVLDAVM-------EDNSVTGSRKGI---------------------------------------------SPLKAKLSRNLA-ALQRERNNIIALRGT-GSAAKKSI-IEVLELMENYDGRGGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQG---SGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRL-TQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAVKR 448
E+D+ R AS ++ Q + A+ RGA TA L++ +K Y + K LV+ A + +++++ L Y +L + + L F S+ L+GGKYRV +G Q +SSG+S V+D + +D T + G+ +K KLSR L + +R+ N +R + G + + + +L+ E+YDG+G AL+ EAG+ DL I R G EL++I T +L A+ + LVWTDL+ AN V QG + +KAID E +V + P P V PPE+A ++ +A + D+W+LG++L L +G G + L S + DL ++ D + F+K+LL DP+ R ++ + R
Sbjct: 109 EDDKLRKAIAS-NERLQQRIEAYERGACTAQDLLASIKSYCDESVTKKFTKVELVQTVAHDIKDKAKQRQL---YDALEGRGRNKAQLAGFKSSD---------LIGGKYRVTMSGIQ---VSSGRSRVVDGELVPESERNDDPPPTTTNNGMGDSRWANGNPSKGPGADADTLSAPSSSSSGLFGGFGFFRRPSSSSQKVKVKLSRGLVESFKRQVENHEKIRRSIGEREYRELFMPLLDHFEDYDGKGACALIFEAGQIDLQQYINRKGTVRGMELRRIAKTLTRILAAIHRSGLVWTDLKTANLVF-QGLPPNAPIKAIDFEDSVAPDSIPTFLDPPVQPPELAETWMGSYWGPEARASEKQDIWALGLVLYHLYTGRPYFERGLDKRQATIRLLSDPNFEPDLS---MIKDGQLRGFLKRLLNRDPRKRPTSGQLLR 529
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|1210514197|dbj|GAX26979.1| (hypothetical protein FisN_9Lh285 [Fistulifera solaris]) HSP 1 Score: 124.405 bits (311), Expect = 1.375e-27 Identity = 96/288 (33.33%), Postives = 144/288 (50.00%), Query Frame = 0
Query: 173 GGKYRVISTGSQGPRISSGKSAVLDAVM--EDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELMEN---YDGR--GGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAVKRNLLFF 453
G KY + SQ +SGKS + A M +D TGS L K+S+N A++RE N + G + +E+L+ + + Y R ALVME G DL I +G + L+ A A + A+ +LVWTD++ NFV+ SG VK IDLESA+ + PVD +PE TPPE AS ++ G + + SYD+WS G+LL +A G+ F+G+ +++ SL +DL + D K + I + L ++P R + V + F
Sbjct: 154 GRKYLLAGKPSQS---TSGKSMIFKAYMCDDDQLPTGS-----ALTIKISKNWEAIEREAENYARITKAG-FLRGQFVELLDYLPDAAVYSKRFKNQSALVMERGAIDLKRYISVNGQLEGRRLRDAAAAAAQCIQAIHSSKLVWTDMKTENFVV-DASGLVKGIDLESAMAVKGNPVDYSPEGTPPEFASAFLAGEGPEFILEYSYDIWSFGMLLYEMAV-GRGYFDGKKPVQIIKSLRDGLD--IDLSA---IEDPKLKSLIDRCLTIEPSKRPNIYEVLLHPFFL 425
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|1210530273|dbj|GAX11189.1| (hypothetical protein FisN_9Hh285 [Fistulifera solaris]) HSP 1 Score: 124.02 bits (310), Expect = 1.630e-27 Identity = 96/288 (33.33%), Postives = 144/288 (50.00%), Query Frame = 0
Query: 173 GGKYRVISTGSQGPRISSGKSAVLDAVM--EDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELMEN---YDGR--GGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAVKRNLLFF 453
G KY + SQ +SGKS + A M +D TGS L K+S+N A++RE N + G + +E+L+ + + Y R ALVME G DL I +G + L+ A A + A+ +LVWTD++ NFV+ SG VK IDLESA+ + PVD +PE TPPE A+ ++ G + + SYD+WS G+LL LA G+ F+G+ +++ SL +DL + D K + I + L ++P R + V + F
Sbjct: 155 GRKYLLAGKPSQS---TSGKSMIFKAYMCDDDELPTGS-----ALTIKISKNWEAIEREAENYARITKAG-FLRGQFVELLDYLPDAAVYSKRFKNQSALVMERGAIDLKRYISVNGQLEGRRLRDAAAAAAQCIQAIHSSKLVWTDMKTENFVV-DASGLVKGIDLESAMAVKGNPVDYSPEGTPPEFATAFLAGEGPEFILEYSYDIWSFGMLLYELAV-GRGYFDGKKPVQIIKSLRDGLD--IDLSA---IEDPKLKSLIDRCLTIEPSKRPNIYEVLLHPFFL 426
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|219112641|ref|XP_002178072.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410957|gb|EEC50886.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 120.168 bits (300), Expect = 2.983e-27 Identity = 88/279 (31.54%), Postives = 144/279 (51.61%), Query Frame = 0
Query: 167 VSGFLLGGKYRVISTGSQGPRISSGKSAVLDAVMEDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELMENYDGRGGH-----ALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSR 440
++ ++G KY + + +SGKS + +A + N+V G G P+ K+S N AL+RE +N I L T + +L+ + + G H ALVME+G EDL + +K G EL++ A + A+ ++++VWT+ +A NFV+ +K IDLESAV + P+D + E PPE A ++ GR + +DVWSLG++L +A+ G++ F E + V+ + T++ +DL + D K I L +DP R
Sbjct: 1 MNKLIVGNKYALTDKLRES---TSGKSKICEA-LRLNAV-GQPIG-KPVTMKISSNSEALERENDNYIKLDDTEGL----FVRILDFLPRAETNGQHFQDKSALVMESGSEDLRSFLKTHGPLDGDELRETVRMAARCVGAVHEKKMVWTEAKAENFVVKNDGRTIKGIDLESAVRHRDNPIDFSAEACPPEFALAFLCGREPFVEMEYHFDVWSLGMVLYEIAT-GQHYFGCEDNMAVIAAQLRNTKQ-IDLSQQPINNDLKD--LIAWCLQIDPVER 265
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|219116614|ref|XP_002179102.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409869|gb|EEC49800.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 123.25 bits (308), Expect = 5.354e-27 Identity = 92/282 (32.62%), Postives = 141/282 (50.00%), Query Frame = 0
Query: 166 SVSGFLLGGKYRVISTGSQGPRISSGKSAVLDAVM--EDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELME-----NYDGRGGHALVMEAGKEDLVAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGGVKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSR 440
+++G ++G R + + +SGKS + A ED TG L KLS N A++RE +N + TG + K +E+++ ++ ALV+E G DL I G S +E+++ +A L A+ LVWTD++ NF++ + G VK IDLESA+P+ + PVD +PE TPPE A ++ G + +YDVWS G+LL L++ GK F+G ++ L + +DL V D I K L +DPK R
Sbjct: 190 ALTGEVIGDDDRQYLISGRPQKSTSGKSRIYKAYKANEDGLPTGDS-----LLIKLSSNTEAIEREASNYAKITKTGLSRGK-FVELVDFVQPASVITKKFGSQSALVLERGAIDLKRYISEKGQLSGKEMREAAVSAASCLQAIHNSGLVWTDMKTENFIVTK-DGQVKGIDLESAIPVQDNPVDYSPEATPPEFARAFLSGDGPFFVLQYNYDVWSFGMLLYELST-GKGYFDGMTPMQITKMLQGGPE--IDLSD---VEDDNLRNLIAKCLRLDPKRR 458
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|1072225721|gb|OEU10466.1| (kinase-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 117.472 bits (293), Expect = 7.436e-26 Identity = 92/292 (31.51%), Postives = 129/292 (44.18%), Query Frame = 0
Query: 189 SSGKSAVLDAVMEDNSVTGSRKGISPLKAKLSRNLAALQRERNNIIALRGTGSAA-------KKSIIEVLELMENYDGRGG---------HALVMEAGKEDL-----VAKIKRDGASSRQELKKICATAGDVLLALEKRRLVWTDLRAANFVLMQGSGG----VKAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRL---------VGDTKSAAFIKKLLVVDPKSRLSAAAV 446
SS +S + A D G + L K+S + L RE N + G A + ++ + N D G ALV+E+G ++L + K+DG S EL+K + A+ LVWTDL+A NFVL G VK IDLES V N P D +PE TPPE A Q Q V +YD+WSLG+LLL L++ GK+ F+G++ + LA+A +D + + + DTK I L +P R S V
Sbjct: 29 SSKRSQIYYAYEADKDGNQPIIGSNRLTVKISNYIDRLSRENKNYNRVASKGRVAFSFFKGSDTCFVRKVDFIPNCDDLAGVTKGIPPGSSALVLESGNQNLRVFLEQPQNKQDGGLSGSELRKAAVNVCRCVEAMHSSGLVWTDLKAENFVLTTDKNGKNQEVKGIDLESCVTFNSNPEDYSPEATPPEFAVAEKQNIGYQFKVQKNYDIWSLGMLLLELST-GKSYFKGKSEDSITKLLANAEMMIIDPKTKSIQLTEQQIYAINDTKLQDLISSCLQFNPNKRPSITQV 319
BLAST of EWM26209.1 vs. NCBI_GenBank
Match: gi|397627719|gb|EJK68588.1| (hypothetical protein THAOC_10219 [Thalassiosira oceanica]) HSP 1 Score: 111.309 bits (277), Expect = 1.279e-22 Identity = 79/246 (32.11%), Postives = 127/246 (51.63%), Query Frame = 0
Query: 213 SPLKAKLSRNLAALQRERNNIIALRGTGSAAKKSIIEVLELMENYDGRGGH--ALVMEAGKEDLVAKIKRDGASSRQELKKICA-TAGDVLLALEKRRLVWTDLRAANFVLMQGS-GGV--KAIDLESAVPLNEKPVDCTPEVTPPEVASLYVQGRLTQATVAPSYDVWSLGILLLFLASGGKNLFEGEASSRVMTSLASATQEKVDLQVDRLVGDTKSAAFIKKLLVVDPKSRLSAAAVKRNLLF 452
+PL K S N+ A++RE N + + S + S I ++ + N + ALVM+ G D+ A + + G EL CA +A + +L +LVW DL+ NFV+++ GG+ + IDLES +PL P+D TPE PPE A+ +++G + SYDVWS G+ L +A+ G+ F+G ++ + L S VD D ++ D I + L +PK R + A + ++ F
Sbjct: 342 NPLIVKFSSNIDAMKREYVNYEKV--SRSLKRGSFIRRVDFLGNAGDEMPNMSALVMQRGVADVKAFMPKIGGKLEGELLLDCALSALKCMESLHSVKLVWNDLKTENFVVIEDERGGISFRGIDLESCMPLRSCPIDYTPEACPPEFAACFMRGDAETFQLDYSYDVWSYGMFLYEIAT-GRGFFDGSSAQSITKQLPSFVPH-VDGVQDLVLAD-----LISRCLSKNPKDRPTVAQISKHEFF 578 The following BLAST results are available for this feature:
BLAST of EWM26209.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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