EWM26251.1, cds4431 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|585108250|gb|EWM26251.1| (co-chaperone hsc20 [Nannochloropsis gaditana]) HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0 Query: 1 MSRHMLRTGALVTGIWNAEAKQSRFICASLHTSKTTALHQSRRAPPSGVLECLVSMRARTRRRPRPPSTVGSDRFASTAHNHDTYHQPPFCCGNPNCEHQQSHEDDSSGKHDHPQSHTEDLPPCWACGKPTGCCNFFCACGKIQPLIGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELTARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEGEADDRRREAVNREEVQHA 334 MSRHMLRTGALVTGIWNAEAKQSRFICASLHTSKTTALHQSRRAPPSGVLECLVSMRARTRRRPRPPSTVGSDRFASTAHNHDTYHQPPFCCGNPNCEHQQSHEDDSSGKHDHPQSHTEDLPPCWACGKPTGCCNFFCACGKIQPLIGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELTARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEGEADDRRREAVNREEVQHA Sbjct: 1 MSRHMLRTGALVTGIWNAEAKQSRFICASLHTSKTTALHQSRRAPPSGVLECLVSMRARTRRRPRPPSTVGSDRFASTAHNHDTYHQPPFCCGNPNCEHQQSHEDDSSGKHDHPQSHTEDLPPCWACGKPTGCCNFFCACGKIQPLIGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELTARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEGEADDRRREAVNREEVQHA 334
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|673045825|ref|XP_008876873.1| (Fe-S protein assembly co-chaperone HscB [Aphanomyces invadans] >gi|574467535|gb|ETV94558.1| Fe-S protein assembly co-chaperone HscB [Aphanomyces invadans]) HSP 1 Score: 171.4 bits (433), Expect = 2.883e-48 Identity = 87/184 (47.28%), Postives = 119/184 (64.67%), Query Frame = 0 Query: 124 CWACGKPTGCCNFFC-ACGKIQPL--IGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELT-ARCRQKDWSRMVSLTNRLQYLSKV 303 CW CG+ T CC+FFC AC IQPL G C+YF+ FG+P+ + +D K++EQ +++LQK MHPD YG KS E++ S NS +N AY LK P SRA YLL+L G+ AL + + +PA+LME+ME RE++EE S E+L L A N +E +LT A +D++ LT LQYL K+ Sbjct: 41 CWKCGERTTCCSFFCSACNHIQPLRAEGACNYFKIFGIPESFAIDAKKVEQLYWSLQKKMHPDLYGSKSEMEKELSVVNSALVNQAYNLLKAPTSRANYLLRLHGIDALGDATTYVEPAVLMEIMEAREDIEECDSMEHLEQLKAANASQIEACMHKLTQALDSNQDFAMSKQLTVELQYLVKL 224
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|669164538|ref|XP_008617831.1| (hypothetical protein SDRG_13516 [Saprolegnia diclina VS20] >gi|530730594|gb|EQC28836.1| hypothetical protein SDRG_13516 [Saprolegnia diclina VS20]) HSP 1 Score: 170.244 bits (430), Expect = 1.062e-47 Identity = 89/209 (42.58%), Postives = 122/209 (58.37%), Query Frame = 0 Query: 112 DHPQSHTEDLPPCWACGKPTGCCNFFCA-CGKIQPL--IGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELT-ARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEG 316 D ++H CW CGKP CC FFC C IQPL G C+YF+ FG+P+ + +D K +EQ +++LQK MHPD YG KS TE++ S +NS +N AY LK P +RA YLL L G+ AL + + DPA+LM +ME RE+V++ S + L L N +E ++T A D LT +LQYL K+ ++ E LEG Sbjct: 41 DRVKAHAHTDQKCWNCGKPNDCCVFFCGTCNHIQPLNPSGACNYFKIFGIPENFSIDPKAVEQLYWSLQKKMHPDLYGHKSETEKELSVTNSAVINTAYNMLKAPTTRANYLLHLHGIDALGDNTTLMDPAILMHIMEAREQVDDCTSVDELEPLKKANATDIEACVVQITSAFDGSHDLESSKRLTVQLQYLMKLAEAIVDKEEELEG 249
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|1173941558|gb|OQR90699.1| (hypothetical protein THRCLA_22517 [Thraustotheca clavata]) HSP 1 Score: 169.088 bits (427), Expect = 3.034e-47 Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 0 Query: 124 CWACGKPTGCCNFFC-ACGKIQPL--IGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELT-ARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEG 316 CW CGK CC FFC +C +IQPL G C+YF+ FG+P+ + +D K +EQ +++LQK MHPD YG KS TE++ S NS +N AY LK P +RA YLL L G+ AL + + DPA+LM +ME RE+V++ S E L L N +E E+T A D LT +LQYL K+ E+ E LEG Sbjct: 50 CWNCGKANDCCAFFCNSCNRIQPLHPNGACNYFKIFGIPENFSIDPKAVEQLYWSLQKKMHPDLYGHKSETEKELSVVNSAVINTAYNMLKAPTTRANYLLHLHGIDALSDNTTLLDPAILMHIMESREQVDDCSSLEELEPLKKENAADIEKCVVEITSAFDGSHDLETSKRLTVQLQYLMKLAEAIVEKEEALEG 246
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|698806212|ref|XP_009836135.1| (Fe-S protein assembly co-chaperone HscB [Aphanomyces astaci] >gi|574108972|gb|ETV74477.1| Fe-S protein assembly co-chaperone HscB [Aphanomyces astaci]) HSP 1 Score: 168.703 bits (426), Expect = 3.578e-47 Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 0 Query: 124 CWACGKPTGCCNFFCA-CGKIQPL--IGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELT-ARCRQKDWSRMVSLTNRLQYLSKV 303 CW CG+PT CC+FFCA C IQPL G C+YF+ FG+P+ + +D K++EQ +++LQK MHPD YG KS E++ S NS +N AY LK P SRA YLL L G+ AL + + DPA LM +ME REE+EE S + L A N +E ++L A +D+ LT LQYL K+ Sbjct: 42 CWKCGQPTDCCSFFCASCSHIQPLRAEGVCNYFKIFGIPESFAIDAKKVEQLYWSLQKKMHPDLYGSKSDVEKELSVVNSALVNQAYNLLKAPTSRANYLLHLHGIDALGDTTTFVDPATLMAIMEAREEIEECTSMDELDRHKAHNANQIEACMQKLAEAFDSNQDFDTSKRLTVELQYLVKL 225
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|1173935950|gb|OQR86988.1| (hypothetical protein ACHHYP_09618 [Achlya hypogyna]) HSP 1 Score: 167.548 bits (423), Expect = 1.400e-46 Identity = 88/197 (44.67%), Postives = 117/197 (59.39%), Query Frame = 0 Query: 124 CWACGKPTGCCNFFCA-CGKIQPL--IGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELT-ARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEG 316 CW CGK CC FFCA C IQPL G C+YF+ FG+P+ + +D K +EQ +++LQK MHPD YG KS TE++ S NS +N AY LK P +RA YLL L G+ AL + + DPA+LM +ME RE+V++ + E L L N +E ++T A D LT +LQYL K+ E+ E LEG Sbjct: 57 CWNCGKTNDCCVFFCASCNHIQPLHANGACNYFKIFGIPENFSIDPKAVEQLYWSLQKKMHPDLYGSKSQTEKELSVVNSAVINTAYNMLKAPTTRANYLLHLHGIDALSDNTTYMDPAILMHIMECREQVDDCTTLEELAPLKKENANDIERCVVQITSAFDGSHDLETSKRLTVQLQYLMKLAEAIVEKEEALEG 253
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|695392801|ref|XP_009520437.1| (hypothetical protein PHYSODRAFT_359419 [Phytophthora sojae] >gi|348685334|gb|EGZ25149.1| hypothetical protein PHYSODRAFT_359419 [Phytophthora sojae]) HSP 1 Score: 153.68 bits (387), Expect = 2.107e-41 Identity = 84/210 (40.00%), Postives = 117/210 (55.71%), Query Frame = 0 Query: 112 DHPQSHTEDLPPCWACGKPTGCCNFFC-ACGKIQPLIG--HCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTA-DPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEEL-TARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEG 316 D P H P CW C T CC+FFC +C IQP+ HC YFE F +PK ++L+ + +E+T++NLQK +HPD YG KS E++ S N+ +N AY+ LK P +R KYLL L G+ AL E + TA DP LLM+ ME+RE + E+ + L + ++ V +L + KD LQY+ K E R E L+G Sbjct: 36 DAPCGHEAKGPDCWKCHHATDCCSFFCGSCNAIQPINKSCHCDYFEMFKIPKHFNLEQRSIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKKPNTRVKYLLALHGIDALGETASTAVDPELLMQTMEIRERIAEAQDVDALHEIRKEISDHIDAVINKLGEVYDKDKDLEATKQFAVELQYMVKCAEEIDLREEKLDG 245
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|1183344271|gb|ORX73162.1| (Co-chaperone Hsc20 [Linderina pennispora]) HSP 1 Score: 149.828 bits (377), Expect = 4.246e-40 Identity = 78/194 (40.21%), Postives = 114/194 (58.76%), Query Frame = 0 Query: 114 PQSHTEDLPPCWACGKPTGCCNFFCA---CGKIQPLIGHCSYFETF-GLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELTARCRQKDWSRMVSLTNRLQYLSKV 303 P++ + CW C + + + FC+ CG IQP+ +YF+ G + +D+D+ +L + F LQ+ +HPD Y QK E+ + + S+++N Y TL+DP+ RA YLL+L G K ++E K DP LLMEVMELREE+E + S E + A+ RN ++E V EL A Q D R LTN QYL +V Sbjct: 11 PETLPKKRKTCWHCQQESDPASVFCSNNKCGAIQPVGPTTTYFDVLVGGRRTFDVDMGELRRVFLKLQQGVHPDSYSQKEDIERTLAETQSSWINRGYATLRDPLHRAHYLLKLAGRK-INEEDKITDPELLMEVMELREEIEMAQSEEQMAAIKRRNDSSIEHVVRELAAAFGQDDLDRARQLTNHFQYLRRV 203
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|698806214|ref|XP_009836136.1| (Fe-S protein assembly co-chaperone HscB, variant [Aphanomyces astaci] >gi|574108973|gb|ETV74478.1| Fe-S protein assembly co-chaperone HscB, variant [Aphanomyces astaci]) HSP 1 Score: 146.362 bits (368), Expect = 1.617e-39 Identity = 67/128 (52.34%), Postives = 87/128 (67.97%), Query Frame = 0 Query: 124 CWACGKPTGCCNFFCA-CGKIQPLI--GHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELR 248 CW CG+PT CC+FFCA C IQPL G C+YF+ FG+P+ + +D K++EQ +++LQK MHPD YG KS E++ S NS +N AY LK P SRA YLL L G+ AL + + DPA LM +ME R Sbjct: 42 CWKCGQPTDCCSFFCASCSHIQPLRAEGVCNYFKIFGIPESFAIDAKKVEQLYWSLQKKMHPDLYGSKSDVEKELSVVNSALVNQAYNLLKAPTSRANYLLHLHGIDALGDTTTFVDPATLMAIMEAR 169
BLAST of EWM26251.1 vs. NCBI_GenBank
Match: gi|301115162|ref|XP_002905310.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110099|gb|EEY68151.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 148.288 bits (373), Expect = 3.634e-39 Identity = 79/200 (39.50%), Postives = 114/200 (57.00%), Query Frame = 0 Query: 122 PPCWACGKPTGCCNFFC-ACGKIQPLIG--HCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTA-DPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEEL-TARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEG 316 P CW C T CC+FFC +C IQP+ HC YFE F +PK ++L+ + +E+T++NLQK +HPD YG KS E++ S N+ +N AY+ LK P +R KYLL L G+ AL E + TA DP LLM+ ME+RE + E+ + L + ++ + +L + +D LQY+ K E R E L+G Sbjct: 47 PDCWKCHHATDCCSFFCKSCNAIQPIDKGCHCDYFEMFKVPKNFNLEQRSIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKKPNTRVKYLLALHGIDALGETASTAVDPELLMQTMEIRERIAEALDVDTLHEIRKEVSEHIDTIINKLGEVYDKDQDLESTKQYAVELQYMVKCAEEIDVREEKLDG 246 The following BLAST results are available for this feature:
BLAST of EWM26251.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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