EWM26291.1, cds4394 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26291.1 vs. NCBI_GenBank
Match: gi|585108292|gb|EWM26291.1| (hypothetical protein Naga_100073g6 [Nannochloropsis gaditana]) HSP 1 Score: 491.5 bits (1264), Expect = 1.343e-175 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0 Query: 1 MQLLQSSRRSTSLLALIIFLHFISHGLHAFFLPTHVSLTHLSTKTVRSVSVAVKAAGSGSESSSPKSSPLGPVQNVKRATSKAALLLGTCIGSFDTSGAPPSQAADLTPLPPEFRTAIMAMRDAAEPLSLRDAAKAVSELPGLDELLYDDASRRAINTELKELRQERPDLWDAETSYYGGVIRRAVNPFHVLELIPLLKVGPFVGGVGYFLAIVVQRKFPRFFALAYFGAIASLVAPAVYLILYT 245 MQLLQSSRRSTSLLALIIFLHFISHGLHAFFLPTHVSLTHLSTKTVRSVSVAVKAAGSGSESSSPKSSPLGPVQNVKRATSKAALLLGTCIGSFDTSGAPPSQAADLTPLPPEFRTAIMAMRDAAEPLSLRDAAKAVSELPGLDELLYDDASRRAINTELKELRQERPDLWDAETSYYGGVIRRAVNPFHVLELIPLLKVGPFVGGVGYFLAIVVQRKFPRFFALAYFGAIASLVAPAVYLILYT Sbjct: 1 MQLLQSSRRSTSLLALIIFLHFISHGLHAFFLPTHVSLTHLSTKTVRSVSVAVKAAGSGSESSSPKSSPLGPVQNVKRATSKAALLLGTCIGSFDTSGAPPSQAADLTPLPPEFRTAIMAMRDAAEPLSLRDAAKAVSELPGLDELLYDDASRRAINTELKELRQERPDLWDAETSYYGGVIRRAVNPFHVLELIPLLKVGPFVGGVGYFLAIVVQRKFPRFFALAYFGAIASLVAPAVYLILYT 245
BLAST of EWM26291.1 vs. NCBI_GenBank
Match: gi|298705610|emb|CBJ28861.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 83.1889 bits (204), Expect = 2.893e-15 Identity = 44/128 (34.38%), Postives = 76/128 (59.38%), Query Frame = 0 Query: 118 IMAMRDAAEPLSLRDAAKAVSELPGLDE--LLYDDASRRAINTELKELRQERPDLWDAETSYYGGVIRRAVNPFHVLELIPLLKVGPFVGGVGYFLAIVVQRKFPRFFALAYFGAIASLVAPAVYLIL 243 ++ ++ A P +L ++ ++++ DE +L + + +I L + R+ + WD+ T G+++R ++PF+V+ L P LK+ PF+GG Y VQ+KF FF AYFGA+A VAPA+ +IL Sbjct: 155 VLELKKADRPDTLLNSMVKINDVVDWDEDGVLENPFAAESIVKGLIDKRRAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVIL 282
BLAST of EWM26291.1 vs. NCBI_GenBank
Match: gi|873229043|emb|CEM14194.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 70.4774 bits (171), Expect = 9.832e-11 Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 0 Query: 113 EFRTAIMAMRDAAEPLSLRDAAKAVSEL-PGLDELL---YDDASRRAINTELKELRQERPDLWDAETSYYGGVIRRAVNPFHVLELIPLLKVGPFVGGVGYFLAIVVQRKFPRFFALAYFGAIASLVAPAVYLIL 243 + A+ + A SL+ + K + EL P D L + R++ T+ +E+ LW E + ++R ++P + L P L+V PF+G V Y + VQR F ++F AY GA A++ AP VYL++ Sbjct: 139 QLAAALQTFKTADSSESLQSSLKTLDELIPTADTLEGTPLKEEVVRSLLTKKREVLSSSKALWAGEVPFLYDDLKRKLDPLSSIALEPFLQVAPFIGVVEYLALLFVQRNFRKYFTAAYLGAAATIFAPIVYLLV 273 The following BLAST results are available for this feature:
BLAST of EWM26291.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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