EWM26309.1, cds4368 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|585108315|gb|EWM26309.1| (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 1681.77 bits (4354), Expect = 0.000e+0 Identity = 825/825 (100.00%), Postives = 825/825 (100.00%), Query Frame = 0 Query: 1 MSSFDISAPDHIEASSALGPPEQPIDIKIQVKKESDAMAAGHPASCEGSKTREATLPLGTLGLLPASSAKNPPIVTRREEHHSKSSLSQGSYSLSASRSAPQHSSSKVGIHVNSQRPLRPDGKETKLTPEPDTGEKSGKRGIIAVEERRESPLKEPSSGPGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKAAGRAATKKRDLGNQESWKAAASYPSVRDPPAEKERRGHGGDAVAKRLNSCAGHVAYKGDKGGRAMSSKGRQEVDASGVVKDSTRCLARAESAEGNMARTTAGTSIGPPPLPVSLSPASQPALSTPTDTSGSGCGSRGAFEHSCLEDWADLDGLEQGALEDFLKSAEGDSYFLGPEGPCAGGESSRERMQREEGEDGSLAASFMSVSLERTRSRAKNPSTAAAPHARHSDHVSGRPPTQPSQPKNERLAHNLRPLKQEENTPQHHHPLYPQHHHYLQAQHKELHVSVRTPAPAWEPSLLSYPPRRLHAMVRSDGPNQPYDISDDPGSSLGITQHSPPGYPSFPSHHFPALHARPPSAHGGTGTPFSSNAVYGWKGGYESERATPTPSCFHATTGVDQRAKDGIPLLLPPSHPSKSSYKPAFPGPAVSLQEDAPGTGFPHISSPNNESQQSLQEDHLLEDGFGGKAQGGRRDEKKGVPEPGCLESQMQPPSFVLDPNESFHIGDDFLV 825 MSSFDISAPDHIEASSALGPPEQPIDIKIQVKKESDAMAAGHPASCEGSKTREATLPLGTLGLLPASSAKNPPIVTRREEHHSKSSLSQGSYSLSASRSAPQHSSSKVGIHVNSQRPLRPDGKETKLTPEPDTGEKSGKRGIIAVEERRESPLKEPSSGPGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKAAGRAATKKRDLGNQESWKAAASYPSVRDPPAEKERRGHGGDAVAKRLNSCAGHVAYKGDKGGRAMSSKGRQEVDASGVVKDSTRCLARAESAEGNMARTTAGTSIGPPPLPVSLSPASQPALSTPTDTSGSGCGSRGAFEHSCLEDWADLDGLEQGALEDFLKSAEGDSYFLGPEGPCAGGESSRERMQREEGEDGSLAASFMSVSLERTRSRAKNPSTAAAPHARHSDHVSGRPPTQPSQPKNERLAHNLRPLKQEENTPQHHHPLYPQHHHYLQAQHKELHVSVRTPAPAWEPSLLSYPPRRLHAMVRSDGPNQPYDISDDPGSSLGITQHSPPGYPSFPSHHFPALHARPPSAHGGTGTPFSSNAVYGWKGGYESERATPTPSCFHATTGVDQRAKDGIPLLLPPSHPSKSSYKPAFPGPAVSLQEDAPGTGFPHISSPNNESQQSLQEDHLLEDGFGGKAQGGRRDEKKGVPEPGCLESQMQPPSFVLDPNESFHIGDDFLV Sbjct: 1 MSSFDISAPDHIEASSALGPPEQPIDIKIQVKKESDAMAAGHPASCEGSKTREATLPLGTLGLLPASSAKNPPIVTRREEHHSKSSLSQGSYSLSASRSAPQHSSSKVGIHVNSQRPLRPDGKETKLTPEPDTGEKSGKRGIIAVEERRESPLKEPSSGPGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKAAGRAATKKRDLGNQESWKAAASYPSVRDPPAEKERRGHGGDAVAKRLNSCAGHVAYKGDKGGRAMSSKGRQEVDASGVVKDSTRCLARAESAEGNMARTTAGTSIGPPPLPVSLSPASQPALSTPTDTSGSGCGSRGAFEHSCLEDWADLDGLEQGALEDFLKSAEGDSYFLGPEGPCAGGESSRERMQREEGEDGSLAASFMSVSLERTRSRAKNPSTAAAPHARHSDHVSGRPPTQPSQPKNERLAHNLRPLKQEENTPQHHHPLYPQHHHYLQAQHKELHVSVRTPAPAWEPSLLSYPPRRLHAMVRSDGPNQPYDISDDPGSSLGITQHSPPGYPSFPSHHFPALHARPPSAHGGTGTPFSSNAVYGWKGGYESERATPTPSCFHATTGVDQRAKDGIPLLLPPSHPSKSSYKPAFPGPAVSLQEDAPGTGFPHISSPNNESQQSLQEDHLLEDGFGGKAQGGRRDEKKGVPEPGCLESQMQPPSFVLDPNESFHIGDDFLV 825
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|585100989|gb|EWM20993.1| (myb-related 3r-1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 209.534 bits (532), Expect = 1.171e-53 Identity = 102/206 (49.51%), Postives = 137/206 (66.50%), Query Frame = 0 Query: 111 HVNSQRPLRPDGKETKLTPEPDTGEKSGKRGIIAVEERRESPLKEPSSGPGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRR 316 H+++ P+ +G++ KS + + E+ R + E + PG W+ E+DA LR VAS+GP+ WK+IS E +G +D QCL+RW KVL+PGLVKGPW EED +IL+C++ G KW+ IA+ IPGRLGKQCRERW N+LDP++ K W+ EED+ L QA+ GNAW KIA LPGRSEN+VKNRWNS+ R Sbjct: 90 HLSTFLPVESNGRK----------RKSARNEVKEGEDPRLVSVDEDEADPGPS--WTDEQDAKLRKVVASRGPKNWKKISQEHFQGLYTDTQCLNRWYKVLRPGLVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNRWNSAAMAR 283
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|676387185|ref|XP_009036871.1| (hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens] >gi|323452494|gb|EGB08368.1| hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens]) HSP 1 Score: 188.348 bits (477), Expect = 3.978e-52 Identity = 91/155 (58.71%), Postives = 117/155 (75.48%), Query Frame = 0 Query: 165 RWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQE---GNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRR 316 +W++EED LR V + G + WK+++ L RSDVQCLHRW KVL+PGL KGPWTA+ED+I+ V GN+KW+ IA +PGR+GKQCRERW+N+LDP +KKG+WT EED +L E Q GN W++IA+ LPGR+ENAVKNRWNSS R+R Sbjct: 1 KWTEEEDNRLREIVETFGAKNWKRLA-MLLGNVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|298708729|emb|CBJ30691.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 204.527 bits (519), Expect = 1.897e-51 Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 0 Query: 157 SSGPGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEG---NLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRR 316 S GP GGK W+KEED LR V G + W+ ++++ L RSDVQCLHRW KVL+PGL KGPWT EED I+ CV+ +KW+ +A +PGR+GKQCRERW+N+LDP++KKGEW+ EEDR++ AQA GN W +IA+ LPGR+ENAVKNR+NSS R++ Sbjct: 89 SKGPKGGK-WTKEEDTRLREIVEHHGARNWRMVAEQ-LGTLRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 249
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|545363885|ref|XP_005647035.1| (Homeodomain-like protein, partial [Coccomyxa subellipsoidea C-169] >gi|384249008|gb|EIE22491.1| Homeodomain-like protein, partial [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 186.808 bits (473), Expect = 2.233e-51 Identity = 90/160 (56.25%), Postives = 119/160 (74.38%), Query Frame = 0 Query: 158 SGPGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQE-GNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRR 316 S GG W+ EED +LR AV+ G + WK+I++ F + R+DVQCLHRWQKVL P LVKGPWT EED I+ V G +W+ IA +PGR+GKQCRERW+N+LDP +K+G+WT+EED +L E A++GN W KIA+ LPGR++NA+KN WNS+ RR+ Sbjct: 9 SAVGG---WTAEEDEVLRRAVSYYGAKNWKKIAEHFED--RTDVQCLHRWQKVLNPELVKGPWTPEEDLKIIELVTRLGAKRWSLIAKDLPGRIGKQCRERWHNHLDPTIKRGDWTKEEDSMLVEKHAEYGNQWAKIAQFLPGRTDNAIKNHWNSTMRRK 163
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|829198436|ref|XP_001027254.2| (Myb-like DNA-binding domain protein [Tetrahymena thermophila SB210] >gi|586724517|gb|EAS07012.2| Myb-like DNA-binding domain protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 204.527 bits (519), Expect = 3.101e-51 Identity = 98/198 (49.49%), Postives = 134/198 (67.68%), Query Frame = 0 Query: 154 KEPSSGPGGGKRW-SKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCV-QEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKAAGRAAT----KKRDLGNQESWKAAASYPSV 345 K +S KRW +KEED +L+ V G + WK+I+ F E RSDVQCLHRWQKVL P LVKGPWT EED+I+ + V ++G W++IA +PGR+GKQCRERW+N+L+P +KK WTEEED+ + EA + GN W IA+ LPGR++NA+KN WNS+ +R+ K R KK++L +E + ++ PSV Sbjct: 401 KNSNSPSNTTKRWWTKEEDELLKNLVKDHGAKNWKKIAGYFKE--RSDVQCLHRWQKVLNPSLVKGPWTKEEDEIVTKLVLEQGPKNWSSIAKHLPGRIGKQCRERWHNHLNPYIKKDRWTEEEDQAIIEAHKRLGNRWALIAKYLPGRTDNAIKNHWNSTIKRKLKMQKREEDLEPPKKKNLNIKEIEEELSNMPSV 596
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|585103684|gb|EWM22952.1| (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 196.052 bits (497), Expect = 3.615e-51 Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 0 Query: 160 PGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKA 319 PGG +W+ +ED LR V + G W IS +FL +RS +QC HRWQKVL+PGLVKGPWT EED II+ C Q G +W IA + GRLGKQCR+RW N+LDPA+ K WTEEED+VLAE + +GNAW KIA+ LPGR EN++KNRW S+ R +E++ Sbjct: 61 PGG--KWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERS 218
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|676390841|ref|XP_009038698.1| (hypothetical protein AURANDRAFT_29109, partial [Aureococcus anophagefferens] >gi|323450640|gb|EGB06520.1| hypothetical protein AURANDRAFT_29109, partial [Aureococcus anophagefferens]) HSP 1 Score: 186.037 bits (471), Expect = 5.525e-51 Identity = 93/154 (60.39%), Postives = 114/154 (74.03%), Query Frame = 0 Query: 164 KRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGK-RSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEG-NLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRR 315 +RW+K ED LRA V + G W + + +L G RS QC HRW+ VL GLVKG +T +ED+II+R ++EG L W IA IPGR+GKQCRERW N+LDP+LKKG WT EED ++AEAQ +WGNAWTKIA LPGR+ENAVKNRWNS+ RR Sbjct: 19 RRWTKREDEKLRAGVKAVGSGDWAAVCNTYLGGHGRSPEQCRHRWEHVLSEGLVKGAFTEDEDEIIVRAMKEGRQLTWMQIAARIPGRIGKQCRERWTNHLDPSLKKGGWTPEEDSIMAEAQTRWGNAWTKIAELLPGRAENAVKNRWNSAFRR 172
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|585103683|gb|EWM22951.1| (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 196.823 bits (499), Expect = 1.445e-50 Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 0 Query: 160 PGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKA 319 PGG +W+ +ED LR V + G W IS +FL +RS +QC HRWQKVL+PGLVKGPWT EED II+ C Q G +W IA + GRLGKQCR+RW N+LDPA+ K WTEEED+VLAE + +GNAW KIA+ LPGR EN++KNRW S+ R +E++ Sbjct: 161 PGG--KWTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQERS 318
BLAST of EWM26309.1 vs. NCBI_GenBank
Match: gi|1072231635|gb|OEU16367.1| (ternary protein-Dna Complex1, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 184.111 bits (466), Expect = 1.521e-50 Identity = 87/152 (57.24%), Postives = 117/152 (76.97%), Query Frame = 0 Query: 165 RWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQ-EGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRR 315 +W++EED +LR AVA+ G + WK+I+ L G R+DVQCLHRWQKVL+PGL+KGPWT EED ++ V+ GN KW+ IA + GRLGKQCRERWYN+L+P + KGEWT +ED+ L +A + GN W +IA+ L GR++NA+KNRWNS+ +R Sbjct: 7 KWTEEEDELLREAVANYGGKSWKKIAGR-LSG-RTDVQCLHRWQKVLKPGLIKGPWTQEEDSKVIELVKMHGNKKWSFIARQLKGRLGKQCRERWYNHLNPDINKGEWTNDEDKALIQAHDELGNRWAEIAKRLSGRTDNAIKNRWNSTLKR 156 The following BLAST results are available for this feature:
BLAST of EWM26309.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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