EWM26306.1, cds4361 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|585108312|gb|EWM26306.1| (nad-dependent epimerase dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 638.647 bits (1646), Expect = 0.000e+0 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0
Query: 1 MWRPLPLVVLFWAWTAWGFSSPLLPDALLAARPRSRGPRHASASYAGRKSTSPFTMMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGLA 319
MWRPLPLVVLFWAWTAWGFSSPLLPDALLAARPRSRGPRHASASYAGRKSTSPFTMMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGLA
Sbjct: 1 MWRPLPLVVLFWAWTAWGFSSPLLPDALLAARPRSRGPRHASASYAGRKSTSPFTMMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGLA 319
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|553182568|ref|XP_005853751.1| (nad-dependent epimerase dehydratase, partial [Nannochloropsis gaditana CCMP526] >gi|422295312|gb|EKU22611.1| nad-dependent epimerase dehydratase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 355.14 bits (910), Expect = 1.445e-121 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
Query: 56 MMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILI 231
MMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILI
Sbjct: 1 MMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILI 176
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|873235750|emb|CEL99835.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 202.601 bits (514), Expect = 5.007e-60 Identity = 109/259 (42.08%), Postives = 162/259 (62.55%), Query Frame = 0
Query: 61 LKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLR------EVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRAL--CVVNEEGPPFSEGQW 311
L D + V G+TGG GQL+T RL GR++V+A+ RS + E L + +E A D RD SL L+D V++ TGT+AFP+ +W+GGNTP A+D +G + +++ + ++ +KK +S+GV R QLP+SILN FGVLDAK+ E+ + + G+D +IVRPGRL+GGP+TN DV+ LLK+E G ++RV + GD + GD RVSVAE +V+AL P G ++ ++N +G P ++ W
Sbjct: 4 LSDGDTIVVAGATGGVGQLVTQRLAQLGRFKVRALSRSPERASGPGGPLEALAAQG--VEVARGDVRDPSSLPSALADASAVVVCTGTTAFPTGKWKGGNTPKAIDEEGTRAVVEQLR---KQGGLKKFALPTSIGVRRPGQLPFSILNLFGVLDAKKSGEEAVMSASKECGYDYVIVRPGRLIGGPYTNPDVATLLKIEGGDKQRVEIAPGDQMAGDCLRVSVAEAIVQALLCPALDGVSIDFSIINSKGDPPTDADW 257
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|219127756|ref|XP_002184095.1| (nucleoside-diphosphate-sugar epimerases-like protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404326|gb|EEC44273.1| nucleoside-diphosphate-sugar epimerases-like protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 190.66 bits (483), Expect = 5.035e-55 Identity = 109/267 (40.82%), Postives = 154/267 (57.68%), Query Frame = 0
Query: 55 TMMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPK---LEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGL 318
T + L+ D V VIG TGG GQL+T +L Y V+ R A+ VL ++ + L+ A D+D+ L V+I+ GT+AFP+ +WRGGNTP A+D++ V NI ++ + P +KKVV L+SVGV RT ++P+ ILN FGVLDAK+ E + A GF+ I+RPGRLVGGP+TN DV+ LL+V+ GA V V+ GDSL+GD R + AE VV+ L E + + + P + W F +
Sbjct: 47 TRLCAALQSGDGVLVIGGTGGVGQLVTQKLA-AAAYDVRVASRDPARAAAVLANDNVRVVSLDLLSATPADLDA---ALQGTAAVVISVGTTAFPTMKWRGGNTPQAIDQEAVTNIAQSARTVP---GLKKVVLLTSVGVDRTGEMPFLILNLFGVLDAKKAGEQAVVDAAVHSGFEYAIIRPGRLVGGPYTNPDVAKLLQVQGGAENGVDVQPGDSLLGDCKRDACAEAVVQCLINEECRNVDFSIASNDQPALTNEAWNQAFRSM 306
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|298707326|emb|CBJ25953.1| (Dihydroflavonol-4-reductase [Ectocarpus siliculosus]) HSP 1 Score: 186.037 bits (471), Expect = 5.453e-53 Identity = 110/267 (41.20%), Postives = 154/267 (57.68%), Query Frame = 0
Query: 60 ELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVL---GGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGP---WTNTDVSALLKV-EEGARKRVV-VEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGL 318
E+ D V V+G++GG G+L+T L G+Y+VK + R+ K +E L G ++E + D D SL + CV+ TGT+AFPS RW GGNTPDAVD V N+L+A ++K+ V LSSVGV R + P+ ILNAFGVLDAK E +R+ A GF IVRPG++ G P ++N+ + E+G+ KR+V + QGDS GD SVAE + +G+ A+G++ V+N G S+G W LF L
Sbjct: 72 EISEGDTVVVVGASGGIGRLVTQSLASTGKYKVKGLVRNLEKAKEALLSSAGGGLEIELEQGDILDESSLVAAMKGAACVVACTGTTAFPSKRWNGGNTPDAVDNLAVGNMLRAAAGGG---SLKRFVLLSSVGVTRADKFPFVILNAFGVLDAKAKGEAAVRKAAKEGGFGYSIVRPGQIKGDPFLAYSNSGAAVSPDAPEKGSAKRMVSLRQGDSEAGDVNPSSVAEAFTQTVGQAGAIGKSYTVINSLGDAPSQGTWDELFAKL 335
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|1003384224|dbj|BAU64048.1| (hypothetical protein STA3757_14170 [Stanieria sp. NIES-3757]) HSP 1 Score: 176.022 bits (445), Expect = 4.447e-50 Identity = 102/260 (39.23%), Postives = 150/260 (57.69%), Query Frame = 0
Query: 65 DRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRW------RGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGL 318
D V V G+TGG GQL+ A+L+ E V+ + R+EAK +++ ++ A D RD D L ++ +I TGT+AFPS RW + N+P+ VD KGV+N++ A + +++ VF+SS GVLR + P+++LNAFGVLDAK E+ + A+ GF I+RPGRL+ GP+T+ D++ LLK + ++ VV+ GDSL G +R+ VA V L P +A +VN P S W ALF L
Sbjct: 6 DLVLVAGATGGVGQLVVAKLL-EKNIPVRVLTRNEAKAKQMF---DDRVAIAIGDIRDRDILSAATQNITHIICCTGTTAFPSSRWDFKNIFQANNSPEEVDAKGVKNLVAAASD------LQRFVFVSSCGVLRKDRFPFNLLNAFGVLDAKLAGEEAI----ASSGFPYTIIRPGRLIDGPYTSYDLNTLLKAKTNGKQAVVIATGDSLNGQTSRIDVANACVECLFYPTTENKAFAIVNSGNRP-SSTNWEALFARL 250
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|505004367|ref|WP_015191469.1| (NAD(P)-dependent oxidoreductase [Stanieria cyanosphaera] >gi|428267855|gb|AFZ33796.1| NAD-dependent epimerase/dehydratase [Stanieria cyanosphaera PCC 7437]) HSP 1 Score: 176.022 bits (445), Expect = 5.114e-50 Identity = 102/261 (39.08%), Postives = 151/261 (57.85%), Query Frame = 0
Query: 65 DRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRW------RGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGLA 319
D V V G+TGG GQL+ A+L+ E V + R+EAK +++ ++ A D R ++L +V +I TGT+AFPS RW + N+P+ VD KGV+N+L A + +K+ VF+SS GVLR Q P+++LNAFGVLDAK + E + A+ GF I+RPGRL+ GP+T+ D++ LLK + ++ VV+ +GD L G +R+ VA V L P + +A ++N G + W ALF LA
Sbjct: 6 DLVLVAGATGGVGQLVVAKLL-EKNIAVLVLTRNEAKAKQMF---EDRVAIAVGDIRHRNTLSTVTQNVTHIICCTGTTAFPSSRWDFKNIFQANNSPEEVDAKGVKNLLAAASD------LKRFVFVSSAGVLRKDQFPFNLLNAFGVLDAKLEGEKAI----ASSGFPYTIIRPGRLIDGPYTSYDLNTLLKAKTDGKQAVVIAKGDDLNGQTSRIDVANACVECLFYPMSENKAFAIIN-SGNKSTSTNWEALFAQLA 251
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|168005111|ref|XP_001755254.1| (predicted protein [Physcomitrella patens] >gi|162693382|gb|EDQ79734.1| predicted protein, partial [Physcomitrella patens]) HSP 1 Score: 175.252 bits (443), Expect = 9.597e-50 Identity = 102/253 (40.32%), Postives = 154/253 (60.87%), Query Frame = 0
Query: 67 VCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPK-LEFAEADSRDIDSLYGPLSD-VDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRA--LCVVNEEGPPFSEGQWTALF 315
+ V+G+TGG GQL+ A L+D G VKAV R K + + G P+ + D+R +++ + + V VI TGT+AFPS RW G N P+ D +GV+N++ A+ ++V+ VV +SS+GV ++ +LP++I+N FGVL K+ E+ LR G I+RPGRL GP+T+ D++ LLK G R+ V++ QGD+LVG+A+RV VAE ++AL P +G+ + V EGP +W ALF
Sbjct: 16 ILVVGATGGVGQLVVAALLDRG-IPVKAVLRDAKKAQTLFGQHDPEAFQVLVGDTRRPETMPSSMFEGVTHVICCTGTTAFPSKRWDGDNGPEKTDWEGVRNLVAAV-----PKSVQHVVLVSSIGVTKSNELPWNIMNLFGVLKYKKMGEEFLRD----SGLPYTIIRPGRLTDGPYTSYDLNTLLKATSGTRRDVIIGQGDNLVGEASRVVVAEACIQALDIPCTIGQTYEISSVEGEGPGKDTARWEALF 258
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|1209844944|dbj|GAX34211.1| (NAD-dependent epimerase/dehydratase [Nodularia sp. NIES-3585]) HSP 1 Score: 174.481 bits (441), Expect = 2.925e-49 Identity = 109/287 (37.98%), Postives = 153/287 (53.31%), Query Frame = 0
Query: 56 MMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWR-----------------------GGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNE-EGPPFSEGQWTALFEGL 318
M V V D V V G+TGG GQL+TA L+++G +V+ + R+ AK ++ + K+E A D RDI +L + D++ +I TGT+AFPS RW N P VD +GV N++ S +K VF+SSVGV R Q P++ILNAFGVLDAK E Q G I+RPGRL+ GP+T+ D++ LLK + G ++ V+VE GD L GDA+R+ VA V ++ P +A +VN+ PP W +F L
Sbjct: 1 MTNVTASVEDLVLVAGATGGVGQLVTANLLEKG-MKVRILTRNAAKAAKMF---NQKVEIAVGDIRDISTLPPAMQDINYIICCTGTTAFPSERWEFEPKPNLLEWGRILMDSEYRDRTAKNNPPKVDAEGVSNLVSVAPSH-----LKCFVFVSSVGVHRKDQPPFNILNAFGVLDAKEKGE----QAIINSGLPYTIIRPGRLIDGPYTSYDLNTLLKAKTGGKQGVIVENGDKLAGDASRIDVAAACVESIFHPSTANKAFNLVNKGTRPPVI--HWETIFSQL 272
BLAST of EWM26306.1 vs. NCBI_GenBank
Match: gi|470113892|ref|XP_004293153.1| (PREDICTED: uncharacterized protein At5g02240 [Fragaria vesca subsp. vesca]) HSP 1 Score: 175.637 bits (444), Expect = 5.463e-49 Identity = 111/285 (38.95%), Postives = 164/285 (57.54%), Query Frame = 0
Query: 37 GPRHASASYAGRKSTSPFT-MMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPK-LEFAEADSRDIDSLYGPLSD-VDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCV--VNEEGPPFSEGQWTALFE 316
G HA + SP + +V + V VIG TGG GQL+ A L+D + + + R K + G + P+ L+ + D+R+ D L + + V VI TGT+AFPS RW G NTP+ VD +GV+N++ A+ R++K+VV +SSVGV + +LP+SI+N FGVL K+ ED+LR G I+RPGRL GP+T+ D++ LLK G R+ V++ QGD+LVG+ +R+ VAE ++AL G+ V V EGP + +W LF+
Sbjct: 46 GAVHAVQQEEQQLVQSPASDSTSVPCSSSKLVLVIGGTGGVGQLVVASLLDR-NIKSRLLLRDTEKATALFGEQDPETLQVVKGDTRNPDDLDPSIFEGVTHVICCTGTTAFPSKRWSGDNTPEKVDWEGVRNLVSAL-----PRSLKRVVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDILRN----SGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDTLVGEVSRLVVAEACIQALDIECTEGKIFEVNSVEGEGPGSDQQKWRELFK 320 The following BLAST results are available for this feature:
BLAST of EWM26306.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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