EWM26313.1, cds4360 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|553182564|ref|XP_005853750.1| (phosphopantothenoylcysteine decarboxylase [Nannochloropsis gaditana CCMP526] >gi|422295311|gb|EKU22610.1| phosphopantothenoylcysteine decarboxylase [Nannochloropsis gaditana CCMP526] >gi|585108319|gb|EWM26313.1| phosphopantothenoylcysteine decarboxylase [Nannochloropsis gaditana]) HSP 1 Score: 450.669 bits (1158), Expect = 3.461e-160 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query: 1 MSAARHRSQRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQLQAYLGRDASGDGREGST 222
MSAARHRSQRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQLQAYLGRDASGDGREGST
Sbjct: 1 MSAARHRSQRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQLQAYLGRDASGDGREGST 222
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|669151490|ref|XP_008611307.1| (phosphopantothenoylcysteine decarboxylase [Saprolegnia diclina VS20] >gi|530736781|gb|EQC35023.1| phosphopantothenoylcysteine decarboxylase [Saprolegnia diclina VS20]) HSP 1 Score: 235.728 bits (600), Expect = 1.613e-75 Identity = 112/195 (57.44%), Postives = 151/195 (77.44%), Query Frame = 0
Query: 8 SQRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQ 202
+ RPRVL+AA+GSVAT+K+PEL ++L+ AEV+V LTK+A F A YNP +A+F+ LG V + D++EW+AW +GDP+LHIQLRDWAD+ ++APLSAN++ KLA+GLCDNL++ +VRAW + KP+L+APAMNT MW HP TA+ +++LQ D Y VIPPVSK+LACG+ G G LAAIDD+V V+
Sbjct: 11 TSTRPRVLVAASGSVATIKVPELVVKLA--EYAEVQVVLTKSADFFLPKAAAYNPTMFAAFEALG--VTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLSCVVRAWS-QSKPLLVAPAMNTQMWTHPCTAKHVQILQDDFGYRVIPPVSKMLACGETGNGALAAIDDIVTHVR 200
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|1173956046|gb|OQS02927.1| (phosphopantothenoylcysteine decarboxylase [Thraustotheca clavata]) HSP 1 Score: 232.646 bits (592), Expect = 2.399e-74 Identity = 110/211 (52.13%), Postives = 151/211 (71.56%), Query Frame = 0
Query: 1 MSAARHRSQRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQL---QAY 208
M+ RRPRVL+ A+GSVATVK+PE+ L LS A+V++ LTK+A F E A+ YNP +A+FQ LG V++ D NEWD W A+GD +LHIQLR+WA++ ++APLSANT+ KL +G+CDNL+T + RAW KP+L+APAMNT MW HP T +QL++L+ D Y +IPP+SK+LACG+ G G LAA+ + VQ+ + Q+Y
Sbjct: 1 MNFVPMNMSRRPRVLVGASGSVATVKVPEIVLELS--KYADVQIVLTKSANFFLEKAEKYNPEVYAAFQTLG--VKIYLDDNEWDTWNAIGDDILHIQLREWAEVFVVAPLSANTMAKLTNGICDNLLTCVARAWA-SSKPLLIAPAMNTQMWNHPCTKKQLQILENDYGYEIIPPMSKMLACGETGNGALAAVKTICTLVQNHITETQSY 206
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|813130422|ref|XP_012197644.1| (hypothetical protein SPRG_03684 [Saprolegnia parasitica CBS 223.65] >gi|641537920|gb|KDO31764.1| hypothetical protein SPRG_03684 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 231.876 bits (590), Expect = 4.460e-74 Identity = 111/195 (56.92%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 8 SQRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQ 202
+ RRPRVL+AA+GSVAT+K+PEL ++L+ AEV+V LTK+A F A YNP +A+F+ L V + D++EW+AW +GDP+LHIQLRDWAD+ ++APLSAN++ KLA+GLCDNL+T + RAW + KP+L+APAMNT MW HP T + + +LQ D Y VIPPVSK+LACG+ G G LAAIDD+V V+
Sbjct: 3 TPRRPRVLVAASGSVATIKVPELVVKLA--EYAEVQVVLTKSANFFLPKAAAYNPTMFAAFEALN--VTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLTCVARAWS-QSKPLLVAPAMNTQMWAHPCTGKHVTILQDDFGYRVIPPVSKMLACGETGNGALAAIDDIVAHVR 192
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|325190586|emb|CCA25083.1| (phosphopantothenoylcysteine decarboxylase putative [Albugo laibachii Nc14]) HSP 1 Score: 228.794 bits (582), Expect = 2.622e-70 Identity = 113/206 (54.85%), Postives = 147/206 (71.36%), Query Frame = 0
Query: 10 RRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGG----------RVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQL 205
RRPR+LLAA+GSVATVKIPE+ +RL A+V V LT++ + F+ AK YNP+ W EL V + +D+NEW++W +GDPVLHI+L+DWADL+L+APLSANTL K+AHG+ DNL+T I RAW + KP L+APAMNT MW+HPFT++QLR+L +LH +I PV K LACG G GGLAA D+L+ A + L
Sbjct: 178 RRPRILLAASGSVATVKIPEIIVRLH--GFADVTVVLTQSTKFFFHRAKNYNPSIWMQLLELTKFSTDVLTDKPAVTIHQDENEWESWNEVGDPVLHIELKDWADLILLAPLSANTLAKVAHGMADNLLTCITRAWPV-TKPFLIAPAMNTDMWDHPFTSRQLRVLTEELHCVLISPVRKKLACGVFGNGGLAAADELISATKKHL 380
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|301117678|ref|XP_002906567.1| (phosphopantothenoylcysteine decarboxylase, putative [Phytophthora infestans T30-4] >gi|262107916|gb|EEY65968.1| phosphopantothenoylcysteine decarboxylase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 217.238 bits (552), Expect = 2.696e-68 Identity = 114/203 (56.16%), Postives = 145/203 (71.43%), Query Frame = 0
Query: 11 RPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASF----QELG---GRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQLQ 206
RPRVLL A+GSVATVK+PE+A+RLS AEV V LTKAA F + AK YNP AW F Q G GR+ V+ D++EW AW +GD V HI+L+DWAD++L+ P+SANTL KLA+GL DNL+T + RAW + KP + APAMNT MW HP TA+QLR+L+ + Y +IPPV K LACG G+GGLA +D +V D+L+
Sbjct: 2 RPRVLLCASGSVATVKVPEIAVRLS--ETAEVCVVLTKAADFFLQRAKNYNPLAWEKFCAATQLPGDDQGRIVVVRDEDEWAAWNVVGDSVRHIELKDWADVMLLVPMSANTLAKLANGLADNLLTCVARAW-ITSKPFIFAPAMNTDMWNHPITAKQLRVLE-EFGYKMIPPVEKKLACGVVGKGGLATVDSIVDFTLDRLR 200
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|635372403|emb|CCI39624.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 223.402 bits (568), Expect = 5.624e-68 Identity = 111/226 (49.12%), Postives = 149/226 (65.93%), Query Frame = 0
Query: 8 SQRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGG----------RVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACG------------------DRGQGGLAAIDDLVRAVQDQL 205
+ RRPR+LL A+GSVATVKIPE+ +RL A+V + LTK+A+ F++ AK YNP++W EL + + +D++EW++WT +G PVLHIQL+DWADL+L+APLSANTL K+AHGL DNL+T I RAW KP ++APAMNT MW+HPFT+Q LR+L +LHY +IPPV K LACG G GGLA +D+++ + L
Sbjct: 176 ASRRPRILLGASGSVATVKIPEIVVRLY--GFADVTIVLTKSAKFFFQRAKNYNPSSWMHLLELTKFSADLLTDKPAITIYQDQDEWESWTEVGHPVLHIQLKDWADLILLAPLSANTLAKVAHGLADNLLTCITRAWP-ATKPSVIAPAMNTDMWDHPFTSQHLRVLTEELHYVLIPPVRKKLACGVVGKCMNLRNVVDPSIFVSVGNGGLATVDEIITVTKQHL 398
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|675201149|ref|XP_008909459.1| (hypothetical protein PPTG_14712 [Phytophthora parasitica INRA-310] >gi|566017730|gb|ETI40641.1| hypothetical protein F443_14008 [Phytophthora parasitica P1569] >gi|567955107|gb|ETK80740.1| hypothetical protein L915_13652 [Phytophthora parasitica] >gi|567983770|gb|ETL34155.1| hypothetical protein L916_13551 [Phytophthora parasitica] >gi|568013264|gb|ETL87441.1| hypothetical protein L917_13358 [Phytophthora parasitica] >gi|568043381|gb|ETM40671.1| hypothetical protein L914_13446 [Phytophthora parasitica] >gi|568090154|gb|ETN04989.1| hypothetical protein PPTG_14712 [Phytophthora parasitica INRA-310] >gi|570321380|gb|ETO69328.1| hypothetical protein F444_14040 [Phytophthora parasitica P1976] >gi|570945141|gb|ETP10398.1| hypothetical protein F441_13936 [Phytophthora parasitica CJ01A1] >gi|570976831|gb|ETP38572.1| hypothetical protein F442_13849 [Phytophthora parasitica P10297] >gi|970646119|gb|KUF86388.1| Phosphopantothenoylcysteine decarboxylase [Phytophthora nicotianae] >gi|970651562|gb|KUF90367.1| Phosphopantothenoylcysteine decarboxylase [Phytophthora nicotianae]) HSP 1 Score: 212.616 bits (540), Expect = 1.860e-66 Identity = 109/203 (53.69%), Postives = 140/203 (68.97%), Query Frame = 0
Query: 11 RPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELG-------GRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQLQ 206
RP VLL A+GSVATVK+PE+A+RLS AEV V LTK+A F + AK YN AAW F GR+ V+ D++EW+ W +GD V HI+L+DWAD++L+AP+SANTL KLA+GL DNL+T + RAW + KP + APAMNT MW HP TAQQ+R+L + Y ++PP+ K LACG G GGLA +D +V DQL
Sbjct: 2 RPCVLLCASGSVATVKVPEIAVRLS--ETAEVCVVLTKSADFFLQRAKDYNEAAWEEFHAATQLSGGGKGRIVVVRDEDEWEGWNVVGDSVRHIELKDWADVMLLAPMSANTLAKLANGLADNLLTCVARAW-IMTKPFIYAPAMNTDMWNHPITAQQIRVLD-EFGYKMVPPIEKKLACGVVGNGGLATVDSIVAFTLDQLH 200
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|673042233|ref|XP_008875077.1| (hypothetical protein H310_10456 [Aphanomyces invadans] >gi|574469270|gb|ETV96285.1| hypothetical protein H310_10456 [Aphanomyces invadans]) HSP 1 Score: 213.772 bits (543), Expect = 5.497e-65 Identity = 115/212 (54.25%), Postives = 151/212 (71.23%), Query Frame = 0
Query: 11 RPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQLQAYLGRDASGDGREGST 222
RPRVLLAA+GSVA VKIP LA+ L A A+V++ +TKAA F + A Y+P A A+F L + +L D +EW AW+++GDPVLHIQLRDWAD+L IAPLSANT+ KLAHGLCDNL+T + RAW KPV++APAMNT M++H T+ QL +L++ Y V+PPVSK LACG+ G G LAA+D +V AV +++ + D G+T
Sbjct: 134 RPRVLLAASGSVAAVKIPALAV--QLAAVADVRILVTKAATFFLDMAAAYDPVAHAAFDALA--LPILHDDDEWSAWSSLGDPVLHIQLRDWADVLCIAPLSANTMAKLAHGLCDNLLTCVARAWS-PTKPVIVAPAMNTQMYQHRVTSSQLALLRS-FGYTVVPPVSKTLACGEVGNGALAAVDTIVAAV---VRSIVSTHTPTDSFHGAT 336
BLAST of EWM26313.1 vs. NCBI_GenBank
Match: gi|1173941637|gb|OQR90760.1| (phosphopantothenoylcysteine decarboxylase [Achlya hypogyna]) HSP 1 Score: 207.223 bits (526), Expect = 3.116e-64 Identity = 105/207 (50.72%), Postives = 146/207 (70.53%), Query Frame = 0
Query: 9 QRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDR--------------GQGGLAAIDDLVRAV 201
++RPRVL+AA+GSVATVKIPE+ ++L+ AEV++ LTKAA F E A YNP+ +A+++ L + + D++EW +W A+GDP+LHIQLRDWAD+ ++APLSAN++ KLA+GL DNL+T + RAW KP+L+APAMNT MW HP T + LR+L+ + Y +I PVSK+LACG+ G G LA +DD+V V
Sbjct: 8 KQRPRVLVAASGSVATVKIPEIVVKLA--EHAEVQLVLTKAAAFFLEKAASYNPSMFAAYEALN--ITIHRDEDEWSSWNAIGDPILHIQLRDWADVFVVAPLSANSMAKLANGLSDNLLTCVARAWS-SAKPLLVAPAMNTQMWLHPCTDKHLRVLEGEYVYRIIRPVSKMLACGETGARTSCWLRITTFVGYGALAHVDDIVACV 209 The following BLAST results are available for this feature:
BLAST of EWM26313.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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