EWM26334.1, cds4351 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|585108341|gb|EWM26334.1| (hypothetical protein Naga_100078g7 [Nannochloropsis gaditana]) HSP 1 Score: 130.183 bits (326), Expect = 2.346e-38 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
Query: 1 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMERTKRRQLE 66
MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMERTKRRQLE
Sbjct: 1 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMERTKRRQLE 66
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|553186012|ref|XP_005854345.1| (hypothetical protein NGA_0191000, partial [Nannochloropsis gaditana CCMP526] >gi|422294711|gb|EKU22011.1| hypothetical protein NGA_0191000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.028 bits (323), Expect = 1.956e-37 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
Query: 1 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMERTKRRQLE 66
MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKME TKRRQLE
Sbjct: 36 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMESTKRRQLE 101
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|673029926|ref|XP_008868924.1| (hypothetical protein H310_05864 [Aphanomyces invadans] >gi|574475319|gb|ETW02319.1| hypothetical protein H310_05864 [Aphanomyces invadans]) HSP 1 Score: 62.003 bits (149), Expect = 2.710e-11 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 1 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMERT 60
++PFL V+LVP C V GA MELFM+ TGFYD+ + EAE R ++ ER E R+ E+
Sbjct: 10 LKPFL---VKLVPLCFVAGACMELFMVKTGFYDIVTKNEAEVRAQKRAERNEYLRQREQA 66
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|698788014|ref|XP_009827039.1| (hypothetical protein H257_04302 [Aphanomyces astaci] >gi|574118128|gb|ETV83609.1| hypothetical protein H257_04302 [Aphanomyces astaci]) HSP 1 Score: 61.2326 bits (147), Expect = 5.257e-11 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0
Query: 1 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREE-LSRKMERT 60
++PFL V+LVP C VVGA +ELFM+ TGFYD+ + EAE R ++ ER E L RK E+
Sbjct: 7 LKPFL---VKLVPVCFVVGAGVELFMVKTGFYDIVTKNEAEVRAQKRAERNEYLLRKREQA 64
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|1173954122|gb|OQS01615.1| (hypothetical protein ACHHYP_20025 [Achlya hypogyna]) HSP 1 Score: 58.151 bits (139), Expect = 8.247e-10 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 0
Query: 10 RLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRK 56
+LVPAC V+GA ME+FM+ TGFYD+ + EAE R + EREE R+
Sbjct: 16 KLVPACFVIGAGMEVFMVKTGFYDIVTKNEAEIRAIKRAEREEYLRR 62
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|298706573|emb|CBJ29532.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 57.7658 bits (138), Expect = 1.596e-9 Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query: 4 FLEIVVRLVPACMVVGASMELFMLNTGFYDVALRK 38
F ++++ VPA VVGA MELFMLNTGFYDVALRK
Sbjct: 6 FATVMLQFVPASFVVGAGMELFMLNTGFYDVALRK 40
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|1173958792|gb|OQS05103.1| (hypothetical protein THRCLA_20717 [Thraustotheca clavata]) HSP 1 Score: 60.4622 bits (145), Expect = 3.851e-9 Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0
Query: 1 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREE-LSRKMERTKRRQ 64
+ P L+ +L+P C V+GA ME+FM+ TGFY++ + EAE R + EREE L RK E+ Q
Sbjct: 520 LAPLLK---KLIPTCFVIGAGMEVFMVKTGFYEIVAKNEAEIRAVKRAEREEYLRRKQEKQVENQ 581
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|813185865|ref|XP_012207104.1| (hypothetical protein SPRG_12662 [Saprolegnia parasitica CBS 223.65] >gi|641527905|gb|KDO22164.1| hypothetical protein SPRG_12662 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 56.225 bits (134), Expect = 5.427e-9 Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query: 10 RLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRK 56
+LVPAC V+G ME+FM+ TGFYD+ R EAE R + ER+E R+
Sbjct: 16 KLVPACFVIGMGMEVFMVKTGFYDIVARNEAEIRAIKRAERDEYLRR 62
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|669158534|ref|XP_008614829.1| (hypothetical protein SDRG_10610 [Saprolegnia diclina VS20] >gi|530733580|gb|EQC31822.1| hypothetical protein SDRG_10610 [Saprolegnia diclina VS20]) HSP 1 Score: 56.225 bits (134), Expect = 5.486e-9 Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query: 10 RLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRK 56
+LVPAC V+G ME+FM+ TGFYD+ R EAE R + ER+E R+
Sbjct: 16 KLVPACFVIGMGMEVFMVKTGFYDIVARNEAEIRAIKRAERDEYLRR 62
BLAST of EWM26334.1 vs. NCBI_GenBank
Match: gi|635365410|emb|CCI46203.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 53.5286 bits (127), Expect = 4.602e-8 Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 1 MRPFLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQARER 50
+RP L+ +L+P C V GA++ELFM+ TGFY++ EAERR++ R R
Sbjct: 8 LRPILQ---KLIPVCFVTGAAIELFMVKTGFYEIVTNAEAERRLQFERMR 54 The following BLAST results are available for this feature:
BLAST of EWM26334.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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