EWM26338.1, cds4349 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|585108345|gb|EWM26338.1| (protein phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0 Query: 1 MGHRTESEQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVMLQGGAAGVEPECAAANPQDGKVDTSIDPTIPPEEWGEGGTAMG 327 MGHRTESEQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVMLQGGAAGVEPECAAANPQDGKVDTSIDPTIPPEEWGEGGTAMG Sbjct: 1 MGHRTESEQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVMLQGGAAGVEPECAAANPQDGKVDTSIDPTIPPEEWGEGGTAMG 327
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|553179977|ref|XP_005852798.1| (protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526] >gi|422295736|gb|EKU23035.1| protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 324/327 (99.08%), Postives = 325/327 (99.39%), Query Frame = 0 Query: 1 MGHRTESEQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVMLQGGAAGVEPECAAANPQDGKVDTSIDPTIPPEEWGEGGTAMG 327 MGHRTESEQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPP EKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYI PPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALV+MLQGGAAGVEPECAAANPQDGKVDTSIDPTIPPEEWGEGGTAMG Sbjct: 547 MGHRTESEQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPTEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYIAPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVIMLQGGAAGVEPECAAANPQDGKVDTSIDPTIPPEEWGEGGTAMG 873
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|298706066|emb|CBJ29176.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 233.032 bits (593), Expect = 1.791e-69 Identity = 138/281 (49.11%), Postives = 184/281 (65.48%), Query Frame = 0 Query: 8 EQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGR-AIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVMLQG 287 +QV A+ +AF R +R +++V AFE+G G VA+ GACA+ L++ + L+VANAGDCRAV+G+R P + GG TG GGD A+ALS DHNAK E + L + HP E D+ CK +CYVKGRLQPTR+ GDAYLKY EFNG+ + SAGR++PPPYTPPYITA PE+ V+E +D + +FVILASDG+WD +N EAV V + A +D S L+ L+ A++ G++VEEL+ +P G RRS HDD+T +V L G Sbjct: 172 DQVKSAITQAFLRVEREYLYQVKAAFELGFGAVARTGACAIMALVRDNRLFVANAGDCRAVLGRRKPT---RLVGGW---------STGPGGDPEALALSNDHNAKEQAEQAKLKKLHPFEGDVFTCKRPASCYVKGRLQPTRSFGDAYLKYPEFNGKEG-THRSAGRFLPPPYTPPYITAEPEISVHE--IDQSNDDFVILASDGLWDHVTNLEAVEIVRKAAYSDKHPECASDCLVQRVLERAAENHGISVEELQEVPEGNRRRSMHDDITCVVFFLNG 437
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|953492960|emb|CEG44906.1| (protein phosphatase [Plasmopara halstedii]) HSP 1 Score: 223.402 bits (568), Expect = 2.738e-66 Identity = 124/280 (44.29%), Postives = 165/280 (58.93%), Query Frame = 0 Query: 8 EQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRS-DSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVMLQ 286 ++V A+ RAF RTDR ++ +V AF++G G VA+ G+CA + LYVANAGD RAV+GK KE G A P LS D NA + E L + HPGE ++ C+H +CYVKG LQPTR+LGD LK+ EFNG P ++ D SAGR+ P PYTPPYI+A PEV+ ++ + D +F+I+ SDG+WD SNEEAV V G+ S+ L+ LQ AK MT +EL +LPPG RR +HDD T +V+ + Sbjct: 167 DRVTAAIQRAFGRTDRDLMTEVASAFKLGFGAVARCGSCACLAYVHDDTLYVANAGDIRAVLGKSG---KEDGVIG-----AEP--------------LSNDQNAMVKSEQEKLVKEHPGETNVFTCRHPTSCYVKGALQPTRSLGDFALKHPEFNGPPYKTGDRSAGRHFPAPYTPPYISAVPEVKSHKLVKGD---KFLIIGSDGLWDYLSNEEAVEIVNAQSLCGNHDLASRALVERVLQKAAKRYEMTYQELLSLPPGSHRRRRHDDTTVVVLFFE 421
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|1173952606|gb|OQS00248.1| (phosphatase 2C, partial [Thraustotheca clavata]) HSP 1 Score: 214.927 bits (546), Expect = 3.212e-65 Identity = 114/273 (41.76%), Postives = 152/273 (55.68%), Query Frame = 0 Query: 13 ALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVML 285 A+ AF TD + ++ AF +G G+V ++G+CA+ L +ANAGD RAV+ R KA+P LS+DHNAKL +E L + HPGE DIV C+H ACYVKG LQPTRA GD K FNG P S GRY PYTPPYI++ PEV ++ PS +F+IL SDGVW+ +N+EAV V I+ G SQ L+ H + A + GMT +E+ ALP G+ RR++HDD T +++ Sbjct: 1 AISYAFFDTDEQLKSILYPAFNLGFGNVNRIGSCAMLAYTYADTLVIANAGDIRAVLATRDEETNIL--------KATP--------------LSQDHNAKLEREQVKLIKEHPGEEDIVMCRHKEACYVKGGLQPTRAFGDFAFKDKNFNGSPFPERRSGGRYFAAPYTPPYISSLPEVETHQLT---PSDQFLILGSDGVWEFLTNQEAVDLVNYYISLGHQDLASQGLVHHVINRAASEAGMTFDEMTALPAGRKRRNRHDDTTVVILFF 248
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|970659737|gb|KUF97351.1| (Phospholipid-transporting ATPase IK [Phytophthora nicotianae]) HSP 1 Score: 217.238 bits (552), Expect = 2.797e-64 Identity = 121/279 (43.37%), Postives = 160/279 (57.35%), Query Frame = 0 Query: 8 EQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRS-DSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVML 285 ++V A+ RAF RTDR ++ +V AF++G G VA+ G+CA + +YVANAGD RAV+GK P AA LS D NA + E L + HPGE + C+H ++CYVKG LQPTRA GD LK+ EFNG P ++ D SAGR+ PYTPPYITA PEV+ ++ D +F+I+ SDG+WD SNEEAV V + G+ + L+ LQ AK GMT +EL +LPPG RR +HDD T +V+ Sbjct: 130 DRVAAAIQRAFGRTDRDLMAEVASAFKLGFGAVARCGSCACLAYVHEGTVYVANAGDIRAVLGKHGKEPNTIAAE----------------------PLSNDQNAMVKFEQEKLIKEHPGEANAFTCRHPDSCYVKGALQPTRAFGDFALKHPEFNGPPYKNGDRSAGRHFSAPYTPPYITAIPEVKSHKLAEGD---KFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRALVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFF 383
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|970635570|gb|KUF80437.1| (protein phosphatase 2C 64 [Phytophthora nicotianae]) HSP 1 Score: 216.853 bits (551), Expect = 8.187e-64 Identity = 121/279 (43.37%), Postives = 160/279 (57.35%), Query Frame = 0 Query: 8 EQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRS-DSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVML 285 ++V A+ RAF RTDR ++ +V AF++G G VA+ G+CA + +YVANAGD RAV+GK P AA LS D NA + E L + HPGE + C+H ++CYVKG LQPTRA GD LK+ EFNG P ++ D SAGR+ PYTPPYITA PEV+ ++ D +F+I+ SDG+WD SNEEAV V + G+ + L+ LQ AK GMT +EL +LPPG RR +HDD T +V+ Sbjct: 167 DRVAAAIQRAFGRTDRDLMAEVASAFKLGFGAVARCGSCACLAYVHEGTVYVANAGDIRAVLGKHGKEPNTIAAE----------------------PLSNDQNAMVKFEQEKLIKEHPGEANAFTCRHPDSCYVKGALQPTRAFGDFALKHPEFNGPPYKNGDRSAGRHFSAPYTPPYITAXPEVKSHKLAEGD---KFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRALVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFF 420
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|568025079|gb|ETL99099.1| (hypothetical protein L917_03999 [Phytophthora parasitica] >gi|570333368|gb|ETO81316.1| hypothetical protein F444_04341 [Phytophthora parasitica P1976] >gi|570957402|gb|ETP22381.1| hypothetical protein F441_04233 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 216.853 bits (551), Expect = 9.717e-64 Identity = 121/279 (43.37%), Postives = 160/279 (57.35%), Query Frame = 0 Query: 8 EQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRS-DSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVML 285 ++V A+ RAF RTDR ++ +V AF++G G VA+ G+CA + +YVANAGD RAV+GK P AA LS D NA + E L + HPGE + C+H ++CYVKG LQPTRA GD LK+ EFNG P ++ D SAGR+ PYTPPYITA PEV+ ++ D +F+I+ SDG+WD SNEEAV V + G+ + L+ LQ AK GMT +EL +LPPG RR +HDD T +V+ Sbjct: 167 DRVAAAIQRAFGRTDRDLMAEVASAFKLGFGAVARCGSCACLAYVHEGTVYVANAGDIRAVLGKHGKEPNTIAAE----------------------PLSNDQNAMVKFEQEKLIKEHPGEANAFTCRHPDSCYVKGALQPTRAFGDYALKHPEFNGPPYKNGDRSAGRHFSAPYTPPYITAIPEVKSHKLAEGD---KFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRALVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFF 420
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|566029733|gb|ETI52644.1| (hypothetical protein F443_04288 [Phytophthora parasitica P1569] >gi|567967235|gb|ETK92415.1| hypothetical protein L915_04143 [Phytophthora parasitica] >gi|567995680|gb|ETL45810.1| hypothetical protein L916_04098 [Phytophthora parasitica] >gi|568055503|gb|ETM52249.1| hypothetical protein L914_04109 [Phytophthora parasitica] >gi|570992847|gb|ETP50263.1| hypothetical protein F442_04254 [Phytophthora parasitica P10297]) HSP 1 Score: 216.853 bits (551), Expect = 9.822e-64 Identity = 121/279 (43.37%), Postives = 160/279 (57.35%), Query Frame = 0 Query: 8 EQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRS-DSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVML 285 ++V A+ RAF RTDR ++ +V AF++G G VA+ G+CA + +YVANAGD RAV+GK P AA LS D NA + E L + HPGE + C+H ++CYVKG LQPTRA GD LK+ EFNG P ++ D SAGR+ PYTPPYITA PEV+ ++ D +F+I+ SDG+WD SNEEAV V + G+ + L+ LQ AK GMT +EL +LPPG RR +HDD T +V+ Sbjct: 167 DRVAAAIQRAFGRTDRDLMAEVASAFKLGFGAVARCGSCACLAYVHEGTVYVANAGDIRAVLGKHGKEPNTIAAE----------------------PLSNDQNAMVKFEQEKLIKEHPGEANAFTCRHPDSCYVKGALQPTRAFGDFALKHPEFNGPPYKNGDRSAGRHFSAPYTPPYITAIPEVKSHKLAEGD---KFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRALVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFF 420
BLAST of EWM26338.1 vs. NCBI_GenBank
Match: gi|675185199|ref|XP_008901484.1| (hypothetical protein PPTG_08288 [Phytophthora parasitica INRA-310] >gi|568098739|gb|ETN13466.1| hypothetical protein PPTG_08288 [Phytophthora parasitica INRA-310]) HSP 1 Score: 216.083 bits (549), Expect = 1.751e-63 Identity = 121/279 (43.37%), Postives = 160/279 (57.35%), Query Frame = 0 Query: 8 EQVIKALVRAFERTDRGVIHKVHHAFEIGLGHVAKVGACALAVLIKGHHLYVANAGDCRAVIGKRSPPPKEKAAGGKRGKKASPVSGTGRGGDYHAVALSEDHNAKLPKEASALAQAHPGEPDIVKCKHANACYVKGRLQPTRALGDAYLKYSEFNGRPNRS-DSSAGRYIPPPYTPPYITATPEVRVYEDILDDPSAEFVILASDGVWDLCSNEEAVRFVGRAIADGDSMHVSQRLIAHALQCRAKDLGMTVEELRALPPGKSRRSKHDDMTALVVML 285 ++V A+ RAF RTDR ++ +V AF++G G VA+ G+CA + +YVANAGD RAV+GK P AA LS D NA + E L + HPGE + C+H ++CYVKG LQPTRA GD LK+ EFNG P ++ D SAGR+ PYTPPYITA PEV+ ++ D +F+I+ SDG+WD SNEEAV V + G+ + L+ LQ AK GMT +EL +LPPG RR +HDD T +V+ Sbjct: 167 DRVAAAIQRAFGRTDRDLMAEVASAFKLGFGAVARCGSCACLAYVHEGTVYVANAGDIRAVLGKHGEEPDTIAAE----------------------PLSNDQNAMVKFEQEKLIKEHPGEANAFTCRHPDSCYVKGALQPTRAFGDFALKHPEFNGPPYKNGDRSAGRHFSAPYTPPYITAIPEVKSHKLAEGD---KFLIIGSDGLWDYLSNEEAVEIVNGQASCGNHDLAGRALVERVLQKAAKRYGMTYQELLSLPPGSHRRRRHDDTTVVVLFF 420 The following BLAST results are available for this feature:
BLAST of EWM26338.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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