EWM26377.1, cds4310 (CDS) Nannochloropsis gaditana

Overview
NameEWM26377.1
Unique Namecds4310
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:287688..287981 -

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Properties
Property NameValue
Protein idEWM26377.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100031g14.2260.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:287688..287981 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26377.1 vs. NCBI_GenBank
Match: gi|585108387|gb|EWM26377.1| (hypothetical protein Naga_100031g14 [Nannochloropsis gaditana])

HSP 1 Score: 196.052 bits (497), Expect = 1.811e-63
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 
Query:    1 MLTPQGNRFLTELPRPQLGIISRHDCQPSTLPHVRVSIPLRGVPARGVVTCLGEWRRPHQDLGVCVITGMRGQHCRLVATHFHPSNMLLRRCRRPYL 97
            MLTPQGNRFLTELPRPQLGIISRHDCQPSTLPHVRVSIPLRGVPARGVVTCLGEWRRPHQDLGVCVITGMRGQHCRLVATHFHPSNMLLRRCRRPYL
Sbjct:    1 MLTPQGNRFLTELPRPQLGIISRHDCQPSTLPHVRVSIPLRGVPARGVVTCLGEWRRPHQDLGVCVITGMRGQHCRLVATHFHPSNMLLRRCRRPYL 97
[Close]
BLAST of EWM26377.1 vs. NCBI_GenBank
Match: gi|553176933|ref|XP_005852418.1| (hypothetical protein NGA_2049820 [Nannochloropsis gaditana CCMP526] >gi|553187641|ref|XP_005854648.1| hypothetical protein NGA_2049810 [Nannochloropsis gaditana CCMP526] >gi|422294412|gb|EKU21712.1| hypothetical protein NGA_2049810 [Nannochloropsis gaditana CCMP526] >gi|422296115|gb|EKU23414.1| hypothetical protein NGA_2049820 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 147.132 bits (370), Expect = 5.695e-44
Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:    1 MLTPQGNRFLTELPRPQLGIISRHDCQPSTLPHVRVSIPLRGVPARGVVTCLGEWRRPHQDLGVCVITGMRGQH 74
            MLTPQGNRFLTEL RPQLGIISRHDCQPSTLPHVRVSIPLRGVPARGVVTCLGEWRRPHQDLGVCVITGMRGQ 
Sbjct:    1 MLTPQGNRFLTELLRPQLGIISRHDCQPSTLPHVRVSIPLRGVPARGVVTCLGEWRRPHQDLGVCVITGMRGQQ 74
The following BLAST results are available for this feature:
BLAST of EWM26377.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585108387|gb|EWM26377.1|1.811e-63100.00hypothetical protein Naga_100031g14 [Nannochlorops... [more]
gi|553176933|ref|XP_005852418.1|5.695e-4497.30hypothetical protein NGA_2049820 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4320rna4320Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications