EWM30217.1, cds431 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30217.1 vs. NCBI_GenBank
Match: gi|585112876|gb|EWM30217.1| (hypothetical protein Naga_100003g51 [Nannochloropsis gaditana]) HSP 1 Score: 1355.12 bits (3506), Expect = 0.000e+0 Identity = 684/684 (100.00%), Postives = 684/684 (100.00%), Query Frame = 0
Query: 1 MTSGSTAKVGCDGLAVSDTQREGTIDSASLSSAPDKLVSHKPQRPKPSSFSSVASGSGNTPLTFQQQSLEELERGENLTSPFTSPAGAWTDHAFFETRPLPRSPLRHSPTTKAGDSQDPTITPVSADSDSAFFEAESGNQPSSSLSFSSFSSSPSTSPNPNGAAVSSPYASISDYAAPAYHGIVECTTPPTRSFLSAAATLVRPPPPGSGAVPPFLDDFAADFGGVSAEMETGKGKSPGSLKQQQLELALAEDGFLSSPGGSEGGESSGKSACPPSTPTSTSDPPPEDLLFLFSPTLVHTPSSRAATPRSTPRHTTRRRLSMPGLPFRATPRSTGSKAPVTASARGTGILSLDSIRVKLATGLTPRSTLSEYVPVHLSPTLAKAQEQEHVDAPDGEDILLVQSAHRLGLDITGLRKALLVRILGVEPTPPGPTSPPSPPPLSPATLLFGSARKQTIAHTFSGSVSPARPTTKRTRSASAGVMPTGWLRRAAGGQSHLGEGRGGKTGKRVSETYQFVLWVLDLESGEEWRVRKGPSEMLALHEAVSAMRPGSLGIDGVKFPLKRHKSETNPPSLEKQARLEEYLRRLTGVSSSHSMVSSSPPSPLGAAARPAVPSQETDYEVAKVLQDFLGATERVDELTTMAHTVGKGDPQRRLRRQIQLPTASGHGAFRWQFAGHGAHHLDVS 684
MTSGSTAKVGCDGLAVSDTQREGTIDSASLSSAPDKLVSHKPQRPKPSSFSSVASGSGNTPLTFQQQSLEELERGENLTSPFTSPAGAWTDHAFFETRPLPRSPLRHSPTTKAGDSQDPTITPVSADSDSAFFEAESGNQPSSSLSFSSFSSSPSTSPNPNGAAVSSPYASISDYAAPAYHGIVECTTPPTRSFLSAAATLVRPPPPGSGAVPPFLDDFAADFGGVSAEMETGKGKSPGSLKQQQLELALAEDGFLSSPGGSEGGESSGKSACPPSTPTSTSDPPPEDLLFLFSPTLVHTPSSRAATPRSTPRHTTRRRLSMPGLPFRATPRSTGSKAPVTASARGTGILSLDSIRVKLATGLTPRSTLSEYVPVHLSPTLAKAQEQEHVDAPDGEDILLVQSAHRLGLDITGLRKALLVRILGVEPTPPGPTSPPSPPPLSPATLLFGSARKQTIAHTFSGSVSPARPTTKRTRSASAGVMPTGWLRRAAGGQSHLGEGRGGKTGKRVSETYQFVLWVLDLESGEEWRVRKGPSEMLALHEAVSAMRPGSLGIDGVKFPLKRHKSETNPPSLEKQARLEEYLRRLTGVSSSHSMVSSSPPSPLGAAARPAVPSQETDYEVAKVLQDFLGATERVDELTTMAHTVGKGDPQRRLRRQIQLPTASGHGAFRWQFAGHGAHHLDVS
Sbjct: 1 MTSGSTAKVGCDGLAVSDTQREGTIDSASLSSAPDKLVSHKPQRPKPSSFSSVASGSGNTPLTFQQQSLEELERGENLTSPFTSPAGAWTDHAFFETRPLPRSPLRHSPTTKAGDSQDPTITPVSADSDSAFFEAESGNQPSSSLSFSSFSSSPSTSPNPNGAAVSSPYASISDYAAPAYHGIVECTTPPTRSFLSAAATLVRPPPPGSGAVPPFLDDFAADFGGVSAEMETGKGKSPGSLKQQQLELALAEDGFLSSPGGSEGGESSGKSACPPSTPTSTSDPPPEDLLFLFSPTLVHTPSSRAATPRSTPRHTTRRRLSMPGLPFRATPRSTGSKAPVTASARGTGILSLDSIRVKLATGLTPRSTLSEYVPVHLSPTLAKAQEQEHVDAPDGEDILLVQSAHRLGLDITGLRKALLVRILGVEPTPPGPTSPPSPPPLSPATLLFGSARKQTIAHTFSGSVSPARPTTKRTRSASAGVMPTGWLRRAAGGQSHLGEGRGGKTGKRVSETYQFVLWVLDLESGEEWRVRKGPSEMLALHEAVSAMRPGSLGIDGVKFPLKRHKSETNPPSLEKQARLEEYLRRLTGVSSSHSMVSSSPPSPLGAAARPAVPSQETDYEVAKVLQDFLGATERVDELTTMAHTVGKGDPQRRLRRQIQLPTASGHGAFRWQFAGHGAHHLDVS 684
BLAST of EWM30217.1 vs. NCBI_GenBank
Match: gi|298714794|emb|CBJ25693.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 67.3958 bits (163), Expect = 6.990e-8 Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 0
Query: 499 EGRGGKTGKRVSETYQFVLWVLDLESGEEWRVRKGPSEMLALHEAVSAMRPGSLGIDGVKF-PLKRHKSETNPPSLEKQARLEEYLRRLTGVSSSHSMVSSSPPSPLGAAARPAVPSQETDYEVAKVLQDFLGATERVDELTTMAHTVGKGDPQRRLRRQIQL 660
+G+GG++ +T +++WV+D+ESG EWRVR+ E L E + MRP +D F P ET ++ RLE YL+RL S++ P P A +A +LQDFLG + RV+ L + + P+R LR+ +Q+
Sbjct: 730 DGKGGRSS--APQTASYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLD---FPPWLPDVKETAGVVDARRPRLEAYLQRLC------SLLYMGPLHPSSA-------------HLAHLLQDFLGTSPRVETLGRLQ----RSRPERELRQALQV 864 The following BLAST results are available for this feature:
BLAST of EWM30217.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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