EWM26388.1, cds4290 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|585108398|gb|EWM26388.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0 Query: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIMAP 280 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIMAP Sbjct: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIMAP 280
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|1200353941|gb|OUU73572.1| (enoyl-ACP reductase [Verrucomicrobia bacterium TMED67]) HSP 1 Score: 214.927 bits (546), Expect = 1.247e-65 Identity = 120/279 (43.01%), Postives = 163/279 (58.42%), Query Frame = 0 Query: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAE-VMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 +L+GK +V G+AN S+AW A+AW AGA V R + VQKL+ S + E + + CD+ D L + KV F GKLD+VLH+VA A A++ F +T +AF+ AH +SA+SLV +++ A PL+ + SI+ +SY GA++ I Y VMG AKA+LEAS R LAA+LG IRVN +S GPV TL+ARGI GF++M + APL RN E++G VFLASD ++TGQVI+VD G IM Sbjct: 4 LLTGKTGVVFGVANKNSIAWGIAKAWHNAGARLVFTYQGERLKEKVQKLV-SEFGE------DTLVIDCDVSDDSDLDKVFNKVDAHFEGKLDMVLHSVAYAPREALEGRFVDTARDAFSTAHDISAYSLVAISKRAAPLM-----------------SEGGSIIAMSYYGAEKVIKHYNVMGVAKAALEASTRYLAADLGSES--IRVNCISAGPVNTLAARGIAGFSNMLKHYDEHAPLGRNVTHEEIGQTGVFLASDGGAAITGQVIYVDCGYQIM 256
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|495188382|ref|WP_007913172.1| (enoyl-ACP reductase [Ktedonobacter racemifer] >gi|297553896|gb|EFH87761.1| short-chain dehydrogenase/reductase SDR [Ktedonobacter racemifer DSM 44963]) HSP 1 Score: 212.616 bits (540), Expect = 7.272e-65 Identity = 115/278 (41.37%), Postives = 167/278 (60.07%), Query Frame = 0 Query: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 +L GK+ L+ G+ANHRS+AWA AQ+ + GA+++ + R E V++L A+ P G E + CD+ E L + AK E FGG LD+++HAVA A P ++N F +TT E F A +SA+SLV +A+ A+PL+ SI +L+Y+ +QR +P Y VM AKA+LE S R LA ELG H IRVN +S GP+ TL+ARG+ G A APLRRN + +VG A+FL+S+ A+++TG+ ++VD G ++M Sbjct: 3 LLEGKKALIFGVANHRSIAWAIAQSLASEGAQLVFTYQERMEKYVREL-AAKIP---GTEV----IPCDVQSDEELDSAFAKAGEIFGGSLDILIHAVAFAPPSELENPFVQTTREGFHTALDISAYSLVAMAKRAVPLMQQN----------------GGSITSLTYMASQRVMPKYNVMAVAKAALECSTRYLAYELGE--HNIRVNTISAGPLNTLAARGVSGLTGFRNHVAEIAPLRRNIEQSEVGDTALFLSSNLARAITGETLYVDAGYNVM 254
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|1125213428|gb|OLB63821.1| (enoyl-ACP reductase [Ktedonobacter sp. 13_2_20CM_2_54_8] >gi|1125453316|gb|OLD79241.1| enoyl-ACP reductase [Ktedonobacter sp. 13_1_20CM_4_53_7]) HSP 1 Score: 212.616 bits (540), Expect = 8.675e-65 Identity = 118/278 (42.45%), Postives = 168/278 (60.43%), Query Frame = 0 Query: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 +L GK+ LV G+ANHRS+ WA AQ+ A GA++ S R E V++L A+ P G E + CD+ E L + A+ E F G+LD+++H+VA A P ++N F +TT E F A +SA+SL+ +AR A PL+ RG S+LT++Y+ ++R +P Y VM AKA+LE SVR LA ELG H IRVNA+S GP+ TL+ARG+ G + APLRRN + +VG AA+FL S A+++TG+++FVD G I+ Sbjct: 3 LLEGKKALVFGIANHRSIGWAIAQSLAAEGAQLAFSYQERMEKYVREL-AAKIP---GTEV----MECDVQSDEQLDSAFARTGEIFNGELDILIHSVAYAPPRELENPFYDTTREGFHTALDISAYSLIAMARRAFPLM-------------QARG--GGSMLTMTYMASERVMPKYNVMAVAKAALECSVRYLAHELGE--HNIRVNAISAGPLNTLAARGVSGLTQIREQMNVVAPLRRNIEQSEVGDAALFLCSPLARAITGEILFVDAGYHII 255
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|501815832|ref|WP_012646796.1| (enoyl-ACP reductase [Geobacter daltonii] >gi|221564095|gb|ACM20067.1| enoyl-(acyl carrier protein) reductase [Geobacter daltonii FRC-32]) HSP 1 Score: 211.846 bits (538), Expect = 1.410e-64 Identity = 118/281 (41.99%), Postives = 174/281 (61.92%), Query Frame = 0 Query: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKL---LASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 +L GK+ L+ G+AN +S+AWA A+++R GAEV +L +V K LA S A ++ CD+ + + +K +MAKV +++GG LD+++H++A A+ ++ +F TT E FA A +SA+SL+ L+REA+PLL N SIL L+Y G Q+ P Y VMG AKA+LE S+R LA +GP +RVNA+S GP+ TL++ G+ GFN + A+ APLRRN EDV GAA++L+SD A+ VTG++ FVD G +I+ Sbjct: 3 LLKGKKALIFGVANDKSIAWAIAESFRQQGAEV---ALAYANEAVAKRVIPLAESIDAA-------MTLPCDVRNDDDIKAVMAKVEKKWGG-LDILVHSIAFANKDELKGSFLNTTREGFAMALDISAYSLIALSREAMPLLEKS----------------NGSILALTYYGGQKVFPNYNVMGVAKAALEMSIRYLAEAVGP--EGVRVNAISAGPLRTLASSGVGGFNQIAGHVASKAPLRRNITQEDVAGAAIYLSSDLARGVTGEIHFVDSGYNII 254
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|506376453|ref|WP_015896172.1| (enoyl-ACP reductase [Acidobacterium capsulatum] >gi|225793576|gb|ACO33666.1| enoyl-[acyl-carrier-protein] reductase [Acidobacterium capsulatum ATCC 51196]) HSP 1 Score: 211.846 bits (538), Expect = 1.754e-64 Identity = 121/278 (43.53%), Postives = 165/278 (59.35%), Query Frame = 0 Query: 2 LSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSL-PRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 L G+ +V G+AN RS+AW Q AAGA + + R + + L+ E G E+ CD+ E ++ + A+ ER+G KLD+++H+VA A A++N F T+ E F AH +S +SL+ L+R A PL+ T SI+TLSY GA++ +P Y VMG AKA+LEA+VR LAA+LG IRVNA+S GP+ TL+ARGI G DM +A A APL RN D +VGGAAVFLAS A +TG+ I+VD G +IM Sbjct: 4 LKGRVAVVFGVANKRSIAWGIVQQLHAAGATLAIGYQNERLRAEAESLI----QEVPGAEA----FQCDVSQDEEIERVFAQFKERYG-KLDILVHSVAYAPADALKNDFVLTSREDFRVAHDISVYSLIALSRAAAPLM-----------------TEGGSIMTLSYFGAEKVVPHYNVMGVAKAALEATVRYLAADLGK--QNIRVNAISAGPIKTLAARGIGGLGDMLKAHADRAPLHRNTDQSEVGGAAVFLASPLASGITGETIYVDSGYNIM 253
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|1125175834|gb|OLB30442.1| (enoyl-ACP reductase [Ktedonobacter sp. 13_2_20CM_53_11]) HSP 1 Score: 211.075 bits (536), Expect = 3.259e-64 Identity = 118/278 (42.45%), Postives = 168/278 (60.43%), Query Frame = 0 Query: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 +L GK+ LV G+ANHRS+ WA AQ+ A GA++ S R E V++L A+ P G E + CD+ E L + A+ E F G+LD+++H+VA A P ++N F +TT E F A +SA+SL+ +AR A PL+ RG S+LT++Y+ ++R +P Y VM AKA+LE SVR LA ELG H IRVNA+S GP+ TL+ARG+ G + APLRRN + +VG AA+FL S A+++TG+++FVD G I+ Sbjct: 3 LLEGKKALVFGIANHRSIGWAIAQSLAAEGAQLAFSYQERMEKYVREL-AAKIP---GTEV----MECDVQSDEQLDSAFARTGEIFNGELDILIHSVAYAPPRELENPFYDTTREGFHTALDISAYSLIAMARRASPLM-------------QARG--GGSMLTMTYMASERVMPKYNVMAVAKAALECSVRYLAHELGE--HNIRVNAISAGPLNTLAARGVSGLTQIREQMNVVAPLRRNIEQSEVGDAALFLCSPLARAITGEILFVDAGYHII 255
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|1088666858|gb|OHE78406.1| (enoyl-ACP reductase [Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10]) HSP 1 Score: 209.92 bits (533), Expect = 1.354e-63 Identity = 118/279 (42.29%), Postives = 169/279 (60.57%), Query Frame = 0 Query: 1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSL-PRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 +L GK +V G+AN RS+AWA A+AW +AGA ++ + R + +V++L A P+ + CD+ + + T A+V ++ KLD++LH+VA A A++ F T+ +AFA AH +SA+SL+ +AREA PL+ T S++ +SY GA + IP Y VMG AKASLEAS R LA +LG +IRVN +S GPV TL+ARG+ GF+ M + APL+R+ E++G VFLASD A +TGQV++VDGG IM Sbjct: 12 LLEGKVGVVFGVANKRSIAWAIAKAWHSAGARLLFNYQGDRLKENVEELTAEFGPDT-------FLYPCDVSCDQQIATFFAEVRKQ-TSKLDLLLHSVAFAPKEALEGDFLSTSRQAFATAHDISAYSLIGVAREAAPLM-----------------TEGGSMIAMSYYGAAKVIPHYNVMGVAKASLEASTRYLAYDLGAK--KIRVNCISAGPVQTLAARGVSGFSSMMKHYEEHAPLKRSCSTEELGQTGVFLASDGASGITGQVLYVDGGYEIM 263
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|494660211|ref|WP_007418155.1| (enoyl-ACP reductase [Pedosphaera parvula] >gi|223891281|gb|EEF57777.1| short-chain dehydrogenase/reductase SDR [bacterium Ellin514]) HSP 1 Score: 208.764 bits (530), Expect = 2.267e-63 Identity = 117/278 (42.09%), Postives = 169/278 (60.79%), Query Frame = 0 Query: 2 LSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSL-PRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278 L+GK +V G+AN RS+AWA AQAW AGA++ + R + +V++L AG S+ + CD+ E + + A+V ++FG KL ++LH+VA A A++ F T+ EAF AH VSA+SL+ L R A PL+ T SI+ ++Y G+++ +P Y VMG AKA+LEAS R LA ++GP ++RVN +S GPV TL+ARGI GF +M + A APL+RN +++G FLASD A ++TGQV++VD G IM Sbjct: 4 LAGKLGIVFGVANKRSIAWAIAQAWHKAGAKLAFTYQGERLKENVEEL-------AGTFGSDTLLMPCDVTKDEDIDRVFAEVGQKFG-KLHLMLHSVAFAPKDALEGKFINTSREAFRVAHDVSAYSLIALVRAAEPLM-----------------TEGGSIVGMTYYGSEKVVPHYNVMGVAKAALEASTRYLAYDMGPK--KVRVNCISAGPVNTLAARGISGFTEMLKHYEAHAPLKRNVLPDELGATGTFLASDGAAAITGQVLYVDCGYQIM 254
BLAST of EWM26388.1 vs. NCBI_GenBank
Match: gi|648407821|ref|WP_026099572.1| (enoyl-[acyl-carrier-protein] reductase [Prochlorothrix hollandica] >gi|815934879|gb|KKI99421.1| enoyl-ACP reductase [Prochlorothrix hollandica PCC 9006 = CALU 1027]) HSP 1 Score: 208.379 bits (529), Expect = 3.267e-63 Identity = 121/282 (42.91%), Postives = 157/282 (55.67%), Query Frame = 0 Query: 2 LSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLP----RFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIMA 279 LSGK LV G+AN RS+AWA AQ AGA + V+ LP RF+ V KL+ P V C++ D + + E++G +LD+++H +A +QN F T E F A +SA+SL+ L REA PL+ T S++TLSYLG R +P Y VMG AKA+LE +VR LAA+LGP QIRVN +S GP+ TL++ I GF DM +APLRRN +VG A FL SD A +TGQVI+VD G SIM Sbjct: 4 LSGKNALVTGIANDRSIAWAIAQQLHQAGANLGVTYLPDDRGRFKEKVGKLVEPLSP--------SLFVPCNVQDDTQVSETFGAIKEQWG-RLDILIHCLAFTEKENLQNDFNLTPREGFKTALDISAYSLIHLCREAKPLM-----------------TEGGSVVTLSYLGGVRVVPNYNVMGVAKAALEMNVRYLAADLGPA--QIRVNGISAGPIKTLASAAIGGFKDMLHHVEETAPLRRNVTQSEVGNTAAFLCSDLASGITGQVIYVDSGYSIMG 257 The following BLAST results are available for this feature:
BLAST of EWM26388.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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