EWM30239.1, cds425 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|585112898|gb|EWM30239.1| (chromatin remodeling complex subunit [Nannochloropsis gaditana]) HSP 1 Score: 3001.08 bits (7779), Expect = 0.000e+0 Identity = 1463/1463 (100.00%), Postives = 1463/1463 (100.00%), Query Frame = 0
Query: 1 MGPGGGRLAYKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYEARPIRATMGVEGNGSTSRARKKRKLGDGRAQGGDGEPPGGEGGTKEGAGGDHVEEGEVKALGGKVWSNALSQLSKHASAALKRRRCGNSEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKSWVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDAEYDVRSRRQSTAAATSQAGPARVLVPGFGESQRRAIRGYLMRFGLTKCGDFKSFYEDLSTHAAGRLAERSAEEVRHYLRCLLAGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDFIASVPPRALVHLSHSQGPAPAISTGGMEEEGEHAMRKVPAPEGGNEAEAHTGTRERSAMNENSSRYEATTPEARRKAYTSGQERQLLAIIGKRMKLMSQALVIEKQRLQRKIRALARVQEHVSKLVSHENYAGKPFPPLELRALLERRRSVHCAIQELFDRLRQDPRLLGSMEVLVLEQRLDEHQGRLCALTQKNRDLLLKAENARSKMILGSSYLEDLNRQASELEAVTRSVQESMQNVTSGYMEMEGALSKHYGPKTASRQSETTVLEATRGMSPRLAGKEESELKEKQKLQVPAQEEGKAISLEQGHGGNAGQSLPMVQEETIGSQPIQSISASEHQVPQQHNEVPALKKLPPSSVAQDIPQSDPAKYIHGRLADQGMAVAAPKEKSGNNANFCDDNSEQQAVDGRKMQGCEEVKANSNDCEAVDCGNGVERHGIEGKMP 1463
MGPGGGRLAYKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYEARPIRATMGVEGNGSTSRARKKRKLGDGRAQGGDGEPPGGEGGTKEGAGGDHVEEGEVKALGGKVWSNALSQLSKHASAALKRRRCGNSEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKSWVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDAEYDVRSRRQSTAAATSQAGPARVLVPGFGESQRRAIRGYLMRFGLTKCGDFKSFYEDLSTHAAGRLAERSAEEVRHYLRCLLAGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDFIASVPPRALVHLSHSQGPAPAISTGGMEEEGEHAMRKVPAPEGGNEAEAHTGTRERSAMNENSSRYEATTPEARRKAYTSGQERQLLAIIGKRMKLMSQALVIEKQRLQRKIRALARVQEHVSKLVSHENYAGKPFPPLELRALLERRRSVHCAIQELFDRLRQDPRLLGSMEVLVLEQRLDEHQGRLCALTQKNRDLLLKAENARSKMILGSSYLEDLNRQASELEAVTRSVQESMQNVTSGYMEMEGALSKHYGPKTASRQSETTVLEATRGMSPRLAGKEESELKEKQKLQVPAQEEGKAISLEQGHGGNAGQSLPMVQEETIGSQPIQSISASEHQVPQQHNEVPALKKLPPSSVAQDIPQSDPAKYIHGRLADQGMAVAAPKEKSGNNANFCDDNSEQQAVDGRKMQGCEEVKANSNDCEAVDCGNGVERHGIEGKMP
Sbjct: 1 MGPGGGRLAYKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYEARPIRATMGVEGNGSTSRARKKRKLGDGRAQGGDGEPPGGEGGTKEGAGGDHVEEGEVKALGGKVWSNALSQLSKHASAALKRRRCGNSEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKSWVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDAEYDVRSRRQSTAAATSQAGPARVLVPGFGESQRRAIRGYLMRFGLTKCGDFKSFYEDLSTHAAGRLAERSAEEVRHYLRCLLAGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDFIASVPPRALVHLSHSQGPAPAISTGGMEEEGEHAMRKVPAPEGGNEAEAHTGTRERSAMNENSSRYEATTPEARRKAYTSGQERQLLAIIGKRMKLMSQALVIEKQRLQRKIRALARVQEHVSKLVSHENYAGKPFPPLELRALLERRRSVHCAIQELFDRLRQDPRLLGSMEVLVLEQRLDEHQGRLCALTQKNRDLLLKAENARSKMILGSSYLEDLNRQASELEAVTRSVQESMQNVTSGYMEMEGALSKHYGPKTASRQSETTVLEATRGMSPRLAGKEESELKEKQKLQVPAQEEGKAISLEQGHGGNAGQSLPMVQEETIGSQPIQSISASEHQVPQQHNEVPALKKLPPSSVAQDIPQSDPAKYIHGRLADQGMAVAAPKEKSGNNANFCDDNSEQQAVDGRKMQGCEEVKANSNDCEAVDCGNGVERHGIEGKMP 1463
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|1137187177|gb|OMO61594.1| (SNF2-related protein [Corchorus capsularis]) HSP 1 Score: 538.88 bits (1387), Expect = 7.818e-163 Identity = 365/1045 (34.93%), Postives = 537/1045 (51.39%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDAE----------YDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDFKSFYEDLSTHAAGRLAERSAEEVRHY----LRCL---------LAGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDF-IASVPPRAL----VHLSHSQGPAPAISTGGMEEEGEHAMRKVPAPEGGNEAEAHTGTRERSAMNENSSRYEATTPEARRKAYTSGQERQLLAIIGKRMKLMSQALVIEKQR-----------------LQRKIRALAR--VQEHVSKLVSHENYAGKPFPPLELRALLERRRSVHCAIQELFDRLRQDPRLLGSMEVLVLEQRLDEHQGRLCALTQKN 1215
SE ++ +KF V++TS+E D K ++WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ EF + +EEQ+++LH ++APH+LRR+KKDV +P K ELI+RVEL+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ D P ++ + + SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRLITR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E + S++I +D+ A+DRLLDR E+++ VD EE G ++FKVA F +E+ A A E E + VE P+N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED +E++ D DA Y R+R +T G + V GF +SQR A LMRFG+ + D+K F A RL +++ EE+ Y LR + + G +EG +R D+L R+AV+ LI KV+ F DD T K K W DLLLL L+HGYGRW A + D+D I V + L ++ S P + G E + GN+ +N+ + P++ + +R+ + + KR+ L+ + + E Q+ + +K+ + E SK++ H PP+E+ AL E + A + DRL +L +H ++C + ++N
Sbjct: 408 SESKQDRIKFDVLLTSYEMINLDTASLKPIKWECMIVDEGHRLKNK-DSKLFLSLKQYTTNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDISQEEQISRLHKMLAPHLLRRVKKDVMTELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVD---PELENSPEAYKQFIESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCSYKKWQYERIDGKVAGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLITRGSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGK----------------------SRQIHYDDTAIDRLLDR--------EQVDDEEAPVDDEEE----------DGFLKAFKVANFEYIEE---------ADTAPEEEAQKVAVE-----------HKNTPNNSERTSYWEELLRDRYEVNKIEEFNSLGKGKRSRKQMVS------------VEDDDLAGLEDVSSDGEDDNFEAELTDGDATSSGNQPGRRAYRKRARTDNTEPIPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGVGEW-DWKEF--------AARLKQKTYEEINEYGTLFLRHIAEEMTDSLTFSDGVPKEG-LRI-----QDVLVRIAVLLLIGNKVKSASENPGTRLFTDD------IIMRYPTLKGGKF-WKEEHDLLLLRAVLKHGYGRWQAIVDDKDLRIQEVICQELNLPFINFPVSGQAGPQVQNGANTINAEATGNQTRGNGSGNDVGGDVPQGVSDTVNQGQA-----YPDSSILYHFRDMQRRQVEYVKKRVLLLEKGINAEYQKEYYGDMKTDDGTSDEPDIGQKVEDIPNGSTTEIPSKVIDH-------LPPIEVIALEEISAA---AFNDDADRL-----------------KLPQHYNKMCKILEEN 1310 HSP 2 Score: 108.997 bits (271), Expect = 4.824e-20 Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 10 YKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
++ E P GG+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E G P LVV PL+ + NWERE + W P ++VV+Y GS ++R +I+ YE
Sbjct: 281 FQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEEN----CG-----------PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSQARAVIREYE 388
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|1050596162|ref|XP_017619553.1| (PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Gossypium arboreum]) HSP 1 Score: 535.028 bits (1377), Expect = 8.459e-163 Identity = 327/825 (39.64%), Postives = 464/825 (56.24%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDA-------EYDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDF--KSFYEDLSTHAAGRLAERSAEEVRHYLRCLL-------------AGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
SE ++ +KF V++TS+E D K + WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ +F + +E Q+++LHD++APH+LRRLKKDV +P K ELI+RV+L+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ + P +D + + LL SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRL+TR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E ++G+ I +D+ A+DRLLDR E+ +S +VD E E + ++FKVA + +++ E A A E N+D +N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED+E E + D A Y R R +T G + V GF +SQR A LMRFG+ GDF K F A RL ++S +E++ Y L + G +EG +R D+L R+AV+ L+ EKV++ + F DD T K K W DLLLL L+HGYGRW A + D+D
Sbjct: 223 SESKQDRIKFDVLLTSYEMINLDTTSLKPIMWECMIVDEGHRLKNK-DSKLFLSLKQYTTNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEQFKDISQEMQISRLHDMLAPHLLRRLKKDVMKQLPPKKELILRVDLSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVE---PDIEDANEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLVTRRSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGKSGQ----------------------IHYDDAAIDRLLDR--------EQADSEDASVDDEADDE----------ILKAFKVANYEVIKESETVAEEETQNVAVE---NKDTT-----------------NNSERTSYWEELLRDRYEVHKVEEFNALGKGKRSRKQMVS------------VEDDDLAGLEDVSSDGEDFEAEVTDADTSAVNQPGRKPYKKRIRVDNTEPLPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGV---GDFDWKEF--------ASRLKQKSYDEIKDYGTLFLTHIAEDITDSPTFSDGVPKEG-LRI-----QDVLVRIAVLLLVSEKVKDASEKPGTRLFTDD------IMMRYPTLKGGKF-WKEEHDLLLLRAVLKHGYGRWQAIVDDKDL 935 HSP 2 Score: 104.76 bits (260), Expect = 7.956e-19 Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 0
Query: 23 GNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
G+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E P LVV PL+ + NWERE + W P ++VV+Y G+ ++R +I+ YE
Sbjct: 109 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFKE---------------NIAPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARAIIREYE 203
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|763801448|gb|KJB68403.1| (hypothetical protein B456_010G244100 [Gossypium raimondii]) HSP 1 Score: 534.258 bits (1375), Expect = 1.086e-162 Identity = 328/827 (39.66%), Postives = 465/827 (56.23%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQ--EEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDA-------EYDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDF--KSFYEDLSTHAAGRLAERSAEEVRHYLRCLL-------------AGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
SE ++ +KF V++TS+E D K ++WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ +F + +E Q+++LHD++APH+LRRLKKDV +P K ELI+RV+L+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ E D+ +D + + LL SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRLITR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E ++G+ I +D+ A+DRLLDR E+ +S +VD E E + ++FKVA + +++ E A A E N+D N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED+E E + D A Y R R +T G + V GF +SQR A LMRFG+ GDF K F A RL ++S +E++ Y L + G +EG +R D+L R+AV+ L+ +KV++ + F DD T K K W DLLLL L+HGYGRW A + D+D
Sbjct: 204 SESKQDRIKFDVLLTSYEMINLDTTSLKPIKWECMIVDEGHRLKNK-DSKLFLSLKQYTTNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEQFKDISQEMQISRLHDMLAPHLLRRLKKDVMKQLPPKKELILRVDLSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDI-----EDANEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLITRRSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGKSGQ----------------------IHYDDAAIDRLLDR--------EQADSEDASVDDEADDE----------ILKAFKVANYEVIKESETVAEEETQNVAVE---NKDTTS-----------------NSERTSYWEELLRDRYEVHKVEEFNALGKGKRSRKQMVS------------VEDDDLAGLEDVSSDGEDFEAEVTDADTSAVNQPGRKPYRKRIRVDNTEPLPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGV---GDFDWKEF--------ASRLKQKSHDEIKDYGTLFLTHIAEDITDSPTFSDGVPKEG-LRI-----QDVLVRIAVLLLVSKKVKDASEKPGTRLFTDD------IMMRYPTLKGGKF-WKEEHDLLLLRAVLKHGYGRWQAIVDDKDL 916 HSP 2 Score: 115.931 bits (289), Expect = 3.261e-22 Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 0
Query: 10 YKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
++P E P GG+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E+ +A P LVV PL+ + NWERE + W P ++VV+Y G+ ++R +I+ YE
Sbjct: 77 FQPYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FEENIA--------------PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARAIIREYE 184
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|1029020179|ref|XP_016673956.1| (PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X3 [Gossypium hirsutum]) HSP 1 Score: 534.258 bits (1375), Expect = 1.475e-162 Identity = 327/825 (39.64%), Postives = 464/825 (56.24%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDA-------EYDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDF--KSFYEDLSTHAAGRLAERSAEEVRHYLRCLL-------------AGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
SE ++ +KF V++TS+E D K + WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ +F + +E Q+++LHD++APH+LRRLKKDV +P K ELI+RV+L+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ + P +D + + LL SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRL+TR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E ++G+ I +D+ A+DRLLDR E+ +S +VD E E + ++FKVA + +++ E A A E N+D +N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED+E E + D A Y R R +T G + V GF +SQR A LMRFG+ GDF K F A RL ++S +E++ Y L + G +EG +R D+L R+AV+ L+ EKV++ + F DD T K K W DLLLL L+HGYGRW A + D+D
Sbjct: 223 SESKQDRIKFDVLLTSYEMINLDTTSLKPIMWECMIVDEGHRLKNK-DSKLFLSLKQYTTNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEQFKDISQEMQISRLHDMLAPHLLRRLKKDVMKQLPPKKELILRVDLSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVE---PDIEDANEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLVTRRSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGKSGQ----------------------IHYDDAAIDRLLDR--------EQADSEDASVDDEADDE----------ILKAFKVANYEVIKESETVAEEETQNVAVE---NKDTT-----------------NNSERTSYWEELLRDRYEVHKVEEFNALGKGKRSRKQMVS------------VEDDDLAGLEDVSSDGEDFEAEVTDADTSAVNQPGRKPYKKRIRVDNTEPLPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGV---GDFDWKEF--------ASRLKQKSYDEIKDYGTLFLTHIAEDITDSPTFSDGVPKEG-LRI-----QDVLVRIAVLLLVSEKVKDASEKPGTRLFTDD------IMMRYPTLKGGKF-WKEEHDLLLLRAVLKHGYGRWQAIVDDKDL 935 HSP 2 Score: 105.531 bits (262), Expect = 5.121e-19 Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 0
Query: 23 GNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
G+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E+ +A P LVV PL+ + NWERE + W P ++VV+Y G+ ++R +I+ YE
Sbjct: 109 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FEENIA--------------PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARAIIREYE 203
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|823235046|ref|XP_012450155.1| (PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X3 [Gossypium raimondii]) HSP 1 Score: 533.872 bits (1374), Expect = 2.273e-162 Identity = 327/825 (39.64%), Postives = 464/825 (56.24%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDA-------EYDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDF--KSFYEDLSTHAAGRLAERSAEEVRHYLRCLL-------------AGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
SE ++ +KF V++TS+E D K ++WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ +F + +E Q+++LHD++APH+LRRLKKDV +P K ELI+RV+L+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ + P +D + + LL SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRLITR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E ++G+ I +D+ A+DRLLDR E+ +S +VD E E + ++FKVA + +++ E A A E N+D N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED+E E + D A Y R R +T G + V GF +SQR A LMRFG+ GDF K F A RL ++S +E++ Y L + G +EG +R D+L R+AV+ L+ +KV++ + F DD T K K W DLLLL L+HGYGRW A + D+D
Sbjct: 223 SESKQDRIKFDVLLTSYEMINLDTTSLKPIKWECMIVDEGHRLKNK-DSKLFLSLKQYTTNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEQFKDISQEMQISRLHDMLAPHLLRRLKKDVMKQLPPKKELILRVDLSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVE---PDIEDANEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLITRRSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGKSGQ----------------------IHYDDAAIDRLLDR--------EQADSEDASVDDEADDE----------ILKAFKVANYEVIKESETVAEEETQNVAVE---NKDTTS-----------------NSERTSYWEELLRDRYEVHKVEEFNALGKGKRSRKQMVS------------VEDDDLAGLEDVSSDGEDFEAEVTDADTSAVNQPGRKPYRKRIRVDNTEPLPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGV---GDFDWKEF--------ASRLKQKSHDEIKDYGTLFLTHIAEDITDSPTFSDGVPKEG-LRI-----QDVLVRIAVLLLVSKKVKDASEKPGTRLFTDD------IMMRYPTLKGGKF-WKEEHDLLLLRAVLKHGYGRWQAIVDDKDL 935 HSP 2 Score: 105.531 bits (262), Expect = 4.785e-19 Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 0
Query: 23 GNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
G+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E+ +A P LVV PL+ + NWERE + W P ++VV+Y G+ ++R +I+ YE
Sbjct: 109 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FEENIA--------------PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARAIIREYE 203
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|763801449|gb|KJB68404.1| (hypothetical protein B456_010G244100 [Gossypium raimondii]) HSP 1 Score: 533.487 bits (1373), Expect = 1.128e-161 Identity = 328/827 (39.66%), Postives = 465/827 (56.23%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQ--EEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDA-------EYDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDF--KSFYEDLSTHAAGRLAERSAEEVRHYLRCLL-------------AGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
SE ++ +KF V++TS+E D K ++WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ +F + +E Q+++LHD++APH+LRRLKKDV +P K ELI+RV+L+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ E D+ +D + + LL SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRLITR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E ++G+ I +D+ A+DRLLDR E+ +S +VD E E + ++FKVA + +++ E A A E N+D N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED+E E + D A Y R R +T G + V GF +SQR A LMRFG+ GDF K F A RL ++S +E++ Y L + G +EG +R D+L R+AV+ L+ +KV++ + F DD T K K W DLLLL L+HGYGRW A + D+D
Sbjct: 289 SESKQDRIKFDVLLTSYEMINLDTTSLKPIKWECMIVDEGHRLKNK-DSKLFLSLKQYTTNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEQFKDISQEMQISRLHDMLAPHLLRRLKKDVMKQLPPKKELILRVDLSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDI-----EDANEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLITRRSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGKSGQ----------------------IHYDDAAIDRLLDR--------EQADSEDASVDDEADDE----------ILKAFKVANYEVIKESETVAEEETQNVAVE---NKDTTS-----------------NSERTSYWEELLRDRYEVHKVEEFNALGKGKRSRKQMVS------------VEDDDLAGLEDVSSDGEDFEAEVTDADTSAVNQPGRKPYRKRIRVDNTEPLPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGV---GDFDWKEF--------ASRLKQKSHDEIKDYGTLFLTHIAEDITDSPTFSDGVPKEG-LRI-----QDVLVRIAVLLLVSKKVKDASEKPGTRLFTDD------IMMRYPTLKGGKF-WKEEHDLLLLRAVLKHGYGRWQAIVDDKDL 1001 HSP 2 Score: 115.546 bits (288), Expect = 5.062e-22 Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 0
Query: 10 YKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
++P E P GG+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E+ +A P LVV PL+ + NWERE + W P ++VV+Y G+ ++R +I+ YE
Sbjct: 162 FQPYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FEENIA--------------PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARAIIREYE 269
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|508782110|gb|EOY29366.1| (Chromatin remodeling factor CHD3 (PICKLE) isoform 3 [Theobroma cacao] >gi|508782111|gb|EOY29367.1| Chromatin remodeling factor CHD3 (PICKLE) isoform 3 [Theobroma cacao]) HSP 1 Score: 528.865 bits (1361), Expect = 2.153e-161 Identity = 324/825 (39.27%), Postives = 460/825 (55.76%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQEEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDAE----------YDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDFKSFYEDLSTHAAGRLAERSAEEVRHYLRCLLA--------GGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKL----TWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
SE ++ +KF V++TS+E D K ++WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ EF + +EEQ+++LH ++APH+LRR+KKDV +P K ELI+RVEL+ QK YYK IL +N++LL ++ S+ N++M+L+K+C HP++++ + P +D + + LL SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRLITR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E + S++I +D+ A+DRLLDR E++ +VD EE G ++FKVA F E +E EA N++ V +N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED +E++ D D Y R R ST G + V GF +SQR A LMRFG+ DFK F RL +++ EE++ Y L+ + +G + ++ D+L R+A + LI +KV+ S F DD I T+ L +W DLLLL L+HGYGRW A + D+D
Sbjct: 289 SESKQDRIKFDVLLTSYEMINLDTASLKPIKWECMIVDEGHRLKNK-DSKLFLSLKQYTSNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDISQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQLLTKRCGPQISLINVVMELRKLCCHPYMLEGVE---PDIEDANEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKNWQYERIDGKVGGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLITRGSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGK----------------------SRQIHYDDAAIDRLLDR--------EQVGDEVASVDDEEE----------DGFLKAFKVANF---EYIEEAETVAEEEVQKEAMENKNTV-----------------NNSERTSYWEELLRDRYEVHKNEEYNSLGKGKRSRKQMVS------------VEEDDLAGLEDVSSDNEDDNFEAELTDGDTTSSGNQSGRKPYRKRVRVDSTEPIPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGVGDY-DFKEF--------VPRLKQKTYEEIKDYGVLFLSHIVEDMNDSPTFSDGVPKEGLRIQ-DVLVRIATLLLIGQKVKSASENPGTSLFTDD-----------ILTRYPTLRGGKSWNEEHDLLLLRAVLKHGYGRWQAIVDDKDL 1004 HSP 2 Score: 112.849 bits (281), Expect = 3.030e-21 Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 0
Query: 10 YKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
++P E P GG+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ L L E P LVV PL+ + NWERE + W P L+VV+Y GS ++R +I+ YE
Sbjct: 162 FQPFEHTPEFLSGGSLHPYQLEGLNFLRYSWSKQTHVILADEMGLGKTIQSIAILASLFEENH---------------TPHLVVAPLSTLRNWEREFATWAPKLNVVMYVGSAQARAIIREYE 269
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|255548778|ref|XP_002515445.1| (PREDICTED: CHD3-type chromatin-remodeling factor PICKLE [Ricinus communis] >gi|223545389|gb|EEF46894.1| chromodomain helicase DNA binding protein, putative [Ricinus communis]) HSP 1 Score: 535.413 bits (1378), Expect = 2.510e-161 Identity = 338/836 (40.43%), Postives = 477/836 (57.06%), Query Frame = 0
Query: 218 CGNSEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQ--EEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRD--GEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDA----------EYDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDFKSFYEDLSTHAAGRLAERSAEEVRHYLRCLL-------------AGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDP-ESFFIDDGRQTAWCKACVITTKAFKL--TWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
G S++ R +KF V++TS+E D K ++WE ++VDEGHRLK +L+ +LK+ HRVLLTGTPLQN+++ELF L+HFL+ GKFA +E F+ EF +++EEQ+++LH ++APH+LRR+KKDV +P K ELI+RVEL+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ E D+ QD + + L+ SSGKL+LLD+M+++LK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRLITR ++EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E + S++I +D+ A+DRLLDR+ GEEE +VD EE G ++FKVA F +++V+A A AAAEA+ + +N+E+S W ELL R E K EE LGKGKR R+++V + D G E+ ED YE+D D + Y R+R + G R V GF ++QR A LMRFG+ + D+K F A R+ ++S EE+R Y L + G +EG +R D+L R+AV+ LI EKV+ F ++ P F DD V+ K W DLLLL L+HGYGRW A + D+D
Sbjct: 394 VGESKQDR--IKFDVLLTSYEMINLDTTSLKPIKWECMIVDEGHRLKNK-DSKLFLSLKQYSSNHRVLLTGTPLQNNLDELFMLMHFLDAGKFASLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMTELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDI-----QDSNESFRQLVESSGKLQLLDKMMVRLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQVRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLITRGTIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGK----------------------SRQIHYDDTAIDRLLDREQVGEEEA----------SVDDEEE----------DGFLKAFKVANFEYIDEVQAAAEEAAQKAAAEAK--------------------STLNNSERSNYWEELLKDRYEVHKVEEFNALGKGKRSRKQMVS------------VEEDDLAGLEDVSSDGEDDNYEADLTDSETASSGTQSGRKPYRKRARVDNMEPIPLMEGEGRSFRVLGFNQNQRAAFVQILMRFGVGEY-DWKEF--------ASRMKQKSYEEIRDYGILFLSHIVEEITDSPNFSDGVPKEG-LRI-----QDVLVRIAVLLLILEKVK-FASEKPGIPLFTDD---------IVLRYPGLKSGKFWKEEHDLLLLRAVLKHGYGRWQAIVDDKDL 1110 HSP 2 Score: 111.309 bits (277), Expect = 1.062e-20 Identity = 56/123 (45.53%), Postives = 75/123 (60.98%), Query Frame = 0
Query: 10 YKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
++ E P GG+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E+ L+ P LVV PL+ + NWERE + W P L+VV+Y GS ++R +I+ YE
Sbjct: 268 FQQYEQSPEFLTGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FEESLS--------------PHLVVAPLSTLRNWEREFATWAPQLNVVMYVGSAQARTVIREYE 375
BLAST of EWM30239.1 vs. NCBI_GenBank
Match: gi|1050596158|ref|XP_017619551.1| (PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X1 [Gossypium arboreum] >gi|1050596160|ref|XP_017619552.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X1 [Gossypium arboreum]) HSP 1 Score: 535.413 bits (1378), Expect = 2.686e-161 Identity = 328/827 (39.66%), Postives = 465/827 (56.23%), Query Frame = 0
Query: 221 SEERRLDVKFHVMITSFEYAWKDAFFFKKLRWEAVVVDEGHRLKGGVTGRLYQALKEMRVGHRVLLTGTPLQNSIEELFNLLHFLEPGKFADVETFKAEFASMDKEEQLAKLHDLIAPHMLRRLKKDVNLAIPEKHELIVRVELTPVQKNYYKLILAQNFELLRRKFKAASSIYNMIMQLKKVCNHPFLMQ--EEDLCYPVDQDYSARAQALLSSSGKLELLDRMLLKLKAGGHRVLLFSQMTTMLDLLEEHVMNRGWRYQRLDGSTRATERQARIDAFNRRSLNHKAKEGKEGDDYFIFLLSTRAGGLGINLTSADTVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRLITRDSVEERTLQLAKKKLLLEHVVVGEAGRGRNMTQEELDDVLKYGTEELFAEEEGEKARNGEEETECANAKKWGDGGTSKSSKRILWDEEAVDRLLDRDGEEEGRGERLESGTEAVDGEEAGEERKTGKGLSGLFQSFKVARFASVEDVEAEAAAVRAAAAAEAEGNEDKVEELRREREAALLRDALPDNTEKS--WVELLGSRQESLKAEEVARLGKGKRERREVVRPAGTYQGPLSEFLSGSDDGGEEEEEQGEEDYEYESDEKDEDA-------EYDVRSRRQSTAAATSQAGPARVL-VPGFGESQRRAIRGYLMRFGLTKCGDF--KSFYEDLSTHAAGRLAERSAEEVRHYLRCLL-------------AGGSTREGSVRALCAVESDLLQRVAVMGLIDEKVREFEAQDPESFFIDDGRQTAWCKACVITTKAFKLTWGRAQDLLLLELTLRHGYGRWTAFLQDEDF 1020
SE ++ +KF V++TS+E D K + WE ++VDEGHRLK +L+ +LK+ HR LLTGTPLQN+++ELF L+HFL+ GKF +E F+ +F + +E Q+++LHD++APH+LRRLKKDV +P K ELI+RV+L+ QK YYK IL +N+++L R+ A S+ N++M+L+K+C HP++++ E D+ +D + + LL SSGKL+LLD+M++KLK GHRVL++SQ MLDLLE++ + W+Y+R+DG ERQ RID FN ++ + F FLLSTRAGGLGINL +ADTVIIYD DWNPH DLQA+ARAHR+GQT KVM+YRL+TR S+EER +Q+ KKK++LEH+VVG + +N+ QEELDD+++YG++ELFA+E E ++G+ I +D+ A+DRLLDR E+ +S +VD E E + ++FKVA + +++ E A A E N+D +N+E++ W ELL R E K EE LGKGKR R+++V + D G E+ ED+E E + D A Y R R +T G + V GF +SQR A LMRFG+ GDF K F A RL ++S +E++ Y L + G +EG +R D+L R+AV+ L+ EKV++ + F DD T K K W DLLLL L+HGYGRW A + D+D
Sbjct: 398 SESKQDRIKFDVLLTSYEMINLDTTSLKPIMWECMIVDEGHRLKNK-DSKLFLSLKQYTTNHRTLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEQFKDISQEMQISRLHDMLAPHLLRRLKKDVMKQLPPKKELILRVDLSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDI-----EDANEAYKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQIRIDRFNAKNSSR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLVTRRSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQEELDDIIRYGSKELFADENDEAGKSGQ----------------------IHYDDAAIDRLLDR--------EQADSEDASVDDEADDE----------ILKAFKVANYEVIKESETVAEEETQNVAVE---NKDTT-----------------NNSERTSYWEELLRDRYEVHKVEEFNALGKGKRSRKQMVS------------VEDDDLAGLEDVSSDGEDFEAEVTDADTSAVNQPGRKPYKKRIRVDNTEPLPLMEGEGKSFRVLGFNQSQRAAFVQILMRFGV---GDFDWKEF--------ASRLKQKSYDEIKDYGTLFLTHIAEDITDSPTFSDGVPKEG-LRI-----QDVLVRIAVLLLVSEKVKDASEKPGTRLFTDD------IMMRYPTLKGGKF-WKEEHDLLLLRAVLKHGYGRWQAIVDDKDL 1110 HSP 2 Score: 114.005 bits (284), Expect = 1.590e-21 Identity = 54/123 (43.90%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 10 YKPLEAQPPCFKGGNWHDYQLIGINFLRNAWHAGNNVILADEMGLGKTIQTLGFLRCLAVEQRLARAGGSGGEREGKFLPFLVVCPLAVVDNWERECSVWCPDLDVVVYKGSQRSREMIQRYE 132
++P E P GG+ H YQL G+NFLR +W +VILADEMGLGKTIQ++ FL L E P LVV PL+ + NWERE + W P ++VV+Y G+ ++R +I+ YE
Sbjct: 271 FQPYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFKEN---------------IAPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARAIIREYE 378 The following BLAST results are available for this feature:
BLAST of EWM30239.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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