EWM30320.1, cds424 (CDS) Nannochloropsis gaditana

Overview
NameEWM30320.1
Unique Namecds424
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1054181..1054362 -
Alignment locationCM002455.1:1053653..1054095 -
Alignment locationCM002455.1:1052798..1053543 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30320.1
Producttrimethylguanosine synthase
Orig transcript idgnl|cribi|Naga_100003g58.1837.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1054181..1054362 -
CM002455.1supercontigCM002455.1:1053653..1054095 -
CM002455.1supercontigCM002455.1:1052798..1053543 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:00094527-methylguanosine RNA capping
GO:0001510RNA methylation
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR019012RNA_cap_Gua-N2-MeTrfase
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|585112979|gb|EWM30320.1| (trimethylguanosine synthase [Nannochloropsis gaditana])

HSP 1 Score: 938.717 bits (2425), Expect = 0.000e+0
Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0
Query:    1 MTSSAKNHSIGPGDGLAGTTGDIEEDEQEPVSQKEVELRAIELERLKADICAHNVNMSFTKIYLDDKELLRGFRVRVWVNSLLAQIVDKVVQSRESPQSGANERKRDARAERVGEDVHESDDQLQAAVREETAEMALTLETMGWEAPLAFGSTAKMRMNRRKSKKRSRVDLSGSEENGRVEGRDGAVGGALSNTHVRFDEDGRRITTDERPPPKYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGRPCEVEENILNYKLKTLTVYFGHYFFPAPLSDWSLKKQKQRGGHGSKGGKKRKKRPADTSAVSLTAE 456
            MTSSAKNHSIGPGDGLAGTTGDIEEDEQEPVSQKEVELRAIELERLKADICAHNVNMSFTKIYLDDKELLRGFRVRVWVNSLLAQIVDKVVQSRESPQSGANERKRDARAERVGEDVHESDDQLQAAVREETAEMALTLETMGWEAPLAFGSTAKMRMNRRKSKKRSRVDLSGSEENGRVEGRDGAVGGALSNTHVRFDEDGRRITTDERPPPKYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGRPCEVEENILNYKLKTLTVYFGHYFFPAPLSDWSLKKQKQRGGHGSKGGKKRKKRPADTSAVSLTAE
Sbjct:    1 MTSSAKNHSIGPGDGLAGTTGDIEEDEQEPVSQKEVELRAIELERLKADICAHNVNMSFTKIYLDDKELLRGFRVRVWVNSLLAQIVDKVVQSRESPQSGANERKRDARAERVGEDVHESDDQLQAAVREETAEMALTLETMGWEAPLAFGSTAKMRMNRRKSKKRSRVDLSGSEENGRVEGRDGAVGGALSNTHVRFDEDGRRITTDERPPPKYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGRPCEVEENILNYKLKTLTVYFGHYFFPAPLSDWSLKKQKQRGGHGSKGGKKRKKRPADTSAVSLTAE 456          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|321451313|gb|EFX63009.1| (hypothetical protein DAPPUDRAFT_269241 [Daphnia pulex])

HSP 1 Score: 235.728 bits (600), Expect = 1.455e-71
Identity = 110/198 (55.56%), Postives = 143/198 (72.22%), Query Frame = 0
Query:  214 KYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGRPCEVEENILNYKLKTLTVYFG 411
            KYW QR++ FS+FD G RLD + WFS+TPERIARHIAER R DL+VD+F G GGN+IQFA     V+AIDIDP K+ +ARHNA VYGV DRIEFI+GD   L P L   ADV+FLSPPWGGP+YL++P + L+ ++     +G ++FE     +PN+A  LPRN ++ +L   A     E+E+NILN K+KT+T Y+G
Sbjct:   48 KYWAQRYKLFSKFDKGIRLDYDSWFSVTPERIARHIAERCRCDLIVDVFCGAGGNSIQFAFKCERVIAIDIDPSKIELARHNASVYGVADRIEFIVGDFFQLAPSLK--ADVVFLSPPWGGPKYLSAPQFCLEDMQ----PNGIDIFEAAQKITPNLAYCLPRNTNIDQLIGIATDGEAEIEQNILNNKVKTITAYYG 239          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|1173957948|gb|OQS04383.1| (trimethylguanosine synthase [Thraustotheca clavata])

HSP 1 Score: 235.728 bits (600), Expect = 3.715e-70
Identity = 133/313 (42.49%), Postives = 176/313 (56.23%), Query Frame = 0
Query:  117 VHESDDQLQAAVREETAEMALTLETMGWEAPLAFGSTAKMRMNRRKSKKRSRVDLSGSEENGRVEGRDGAVGGALSNTHVRFDEDGRRITTDE------------------RPPPKYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGRPCEVEENILNYKLKTLTVYFG 411
            VHE++ +    +     EMA     +G   PLAFGST        K KK+ R+ +   E+  + +     VG   S      DED   I  +E                  +   KYW QR+  F++FD G RLD EGWFS+TPE I++H A+R   DLV+D F GCGGNAIQ AL+   V+AID+DP K+ IA+HNA+VYGV DRIE+++GDA  LLP L   ADV+FLSPPWGGPEYL +P ++L  + + G  SG +LF      + N+   LPRN    ++        CE E N LN KLKT+T+Y G
Sbjct:   40 VHENEQKEMQELLHGEMEMA----GVGGLLPLAFGST--------KRKKKMRIHVKFDEDGNQSQIEMQNVG---SKRQREEDEDQDLIVKEEAKCDDTHIAAVEKPVNLDKSLEKYWAQRYALFTKFDHGIRLDHEGWFSVTPEVISKHHAKRIACDLVIDAFTGCGGNAIQLALTCRQVIAIDMDPCKIEIAKHNAKVYGVADRIEWLVGDAFQLLPNLQ--ADVIFLSPPWGGPEYLNAPEFTLDTMMM-GDQSGIDLFHLARKITSNIVYFLPRNTSKAQIRSLVPEETCEFEHNFLNKKLKTITIYCG 334          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|698804768|ref|XP_009835413.1| (hypothetical protein H257_10535 [Aphanomyces astaci] >gi|574109405|gb|ETV74908.1| hypothetical protein H257_10535 [Aphanomyces astaci])

HSP 1 Score: 235.728 bits (600), Expect = 1.170e-69
Identity = 130/307 (42.35%), Postives = 180/307 (58.63%), Query Frame = 0
Query:  130 EETAEMALTLETM-----GWEAPLAFGSTAKMRMNRRKSKKRSRVDLSGSEENGRVEGRDGAVGGALSNTHVRFDEDGRRITTDERP------PP------------KYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRE--LAEAAGGRPCEVEENILNYKLKTLTVYFG 411
            EETA+  L  + M         PL+FGST +    +  + +R        +++G+    D  V   +    +  D     +  D+ P      PP            KYW QR+  FS+FDLG  LD EGWFS+TPE IA H A R   D+VVD F GCGGNAIQ A++ H+V+AID+DP K+AIA+HNA +YGV DRIE+I+GD+  +LPRL   ADV+FLSPPWGGP YL    +SL+ +R+ G   G ELF+   + + ++   +PRN+D ++  L + +     EVE N LN+KLKT+T+YFG
Sbjct:   60 EETAQQQLLKDEMDAVGMAGMLPLSFGSTKQH--TKPPTMRRQTPQYITFDDDGKGVEVDPPVVPMMRKRPLEDDTTTDDVIVDDAPTAESAPPPQKKPAHIHPSLQKYWAQRYALFSKFDLGIELDHEGWFSVTPEVIAAHHATRIACDVVVDAFTGCGGNAIQLAMTCHHVIAIDVDPAKIAIAKHNATIYGVADRIEWIVGDSFAVLPRLHH-ADVVFLSPPWGGPAYLNQNVFSLQDMRM-GMFDGIELFKIAAAVTKDIVYFVPRNVDTKQVKLLQESNEDVAEVEFNYLNHKLKTVTMYFG 362          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|698804766|ref|XP_009835412.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574109406|gb|ETV74909.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 232.261 bits (591), Expect = 1.911e-69
Identity = 113/220 (51.36%), Postives = 149/220 (67.73%), Query Frame = 0
Query:  206 TTDERPPP------------KYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRE--LAEAAGGRPCEVEENILNYKLKTLTVYFG 411
            T +  PPP            KYW QR+  FS+FDLG  LD EGWFS+TPE IA H A R   D+VVD F GCGGNAIQ A++ H+V+AID+DP K+AIA+HNA +YGV DRIE+I+GD+  +LPRL   ADV+FLSPPWGGP YL    +SL+ +R+ G   G ELF+   + + ++   +PRN+D ++  L + +     EVE N LN+KLKT+T+YFG
Sbjct:   49 TAESAPPPQKKPAHIHPSLQKYWAQRYALFSKFDLGIELDHEGWFSVTPEVIAAHHATRIACDVVVDAFTGCGGNAIQLAMTCHHVIAIDVDPAKIAIAKHNATIYGVADRIEWIVGDSFAVLPRLHH-ADVVFLSPPWGGPAYLNQNVFSLQDMRM-GMFDGIELFKIAAAVTKDIVYFVPRNVDTKQVKLLQESNEDVAEVEFNYLNHKLKTVTMYFG 266          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|675868670|ref|XP_009019895.1| (hypothetical protein HELRODRAFT_65292, partial [Helobdella robusta] >gi|555699254|gb|ESO02487.1| hypothetical protein HELRODRAFT_65292, partial [Helobdella robusta])

HSP 1 Score: 228.794 bits (582), Expect = 2.281e-69
Identity = 107/199 (53.77%), Postives = 143/199 (71.86%), Query Frame = 0
Query:  214 KYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAG-GRPCEVEENILNYKLKTLTVYFG 411
            KYW QR+R FS+FD G R+DDEGW+S+TPE+IARHIA R + D++VD F G GGN IQFA + + V+AIDIDP K++ ARHNA +YGV  +I+FI+GD L L P L   ADV+FLSPPWGGP YL +  + +K +      +G E++E+    + NVA  LPRN D+ +++  AG G   E+E+N+LN K+KTLT YFG
Sbjct:   10 KYWAQRYRLFSRFDRGIRIDDEGWYSVTPEKIARHIANRCKCDVIVDAFCGIGGNTIQFAFTCNKVIAIDIDPQKISYARHNAAIYGVAHKIQFIVGDYLVLAPTLK--ADVVFLSPPWGGPSYLDAKLFDIKTMM---SPNGFEIWEKTKLITRNVAFFLPRNTDVEQVSSLAGSGGSVEIEQNLLNGKIKTLTAYFG 203          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|321456618|gb|EFX67720.1| (hypothetical protein DAPPUDRAFT_63741 [Daphnia pulex])

HSP 1 Score: 228.409 bits (581), Expect = 3.632e-69
Identity = 107/199 (53.77%), Postives = 140/199 (70.35%), Query Frame = 0
Query:  214 KYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGRPCEVEENILNYKLKTLTVYFGH 412
            KYW QR+R FS+FD G RLD + WFS+TPERIARHIA+R R DL+VD F G GGN+IQFA     V+AIDIDP K+ +ARHNA VYGV DRIEFI+GD   L P L   ADV+FLSPPWGGP+YL++P + L+ ++     +G ++F+     + N+A  LPRN ++ +L         E+E+NILN K+KT+T Y+G 
Sbjct:   24 KYWAQRYRLFSKFDKGIRLDYDSWFSVTPERIARHIADRCRCDLIVDAFCGAGGNSIQFAFKCERVIAIDIDPSKIELARHNASVYGVADRIEFIVGDFFQLAPSLK--ADVVFLSPPWGGPKYLSAPQFCLEDMQ----PNGFDIFKAAQKITSNLAYFLPRNTNVDQLIGLTTDGKAEIEQNILNNKIKTITAYYGE 216          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|1026265307|gb|OAC98469.1| (hypothetical protein MUCCIDRAFT_149755 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 229.18 bits (583), Expect = 6.336e-69
Identity = 109/199 (54.77%), Postives = 142/199 (71.36%), Query Frame = 0
Query:  214 KYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAG-GRPCEVEENILNYKLKTLTVYFG 411
            +Y+ QR+ +FS+FD G  +D EGWFS+TPE+IARHIA R +SD+++D F GCGGN+IQFAL+   V+AID+DP KL  AR NA++YGV DRIEFILGD   L P L   AD +FLSPPWGGP Y+A   Y LK +    G++ H++     S +PNVA  +PRN D ++LA+ AG G  CE+E N LN K+K LT Y+G
Sbjct:   33 RYYYQRYAYFSKFDQGILMDKEGWFSVTPEKIARHIALRCQSDIIIDAFCGCGGNSIQFALTCERVIAIDLDPVKLHCARENAKIYGVADRIEFILGDFFDLAPNLK--ADCVFLSPPWGGPAYMAEDVYDLKSMIPGDGMNIHKIAS---SITPNVAFFVPRNTDPQQLAQLAGPGNTCEIELNSLNGKIKALTAYYG 226          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|1183503618|gb|ORZ27216.1| (RNA cap guanine-N2 methyltransferase-domain-containing protein [Lobosporangium transversale])

HSP 1 Score: 229.565 bits (584), Expect = 7.405e-69
Identity = 108/214 (50.47%), Postives = 146/214 (68.22%), Query Frame = 0
Query:  201 DGRRITTDERPPPKYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGRP---CEVEENILNYKLKTLTVYFG 411
            DG+++  D +   KYW QR+R+F  FD G R+D EGW+S+TPE+IA HIA+R   D+V+D F G GGNAIQFA++ H V+AIDIDP +L  A+HNA++YGV+DRIEFI GD +TL+PRL   ADV+FLSPPWGGP YL    + +K+   +  + G  LF      + N+A  LPRN +  ++   AG  P   CE+E+N+LN+  K  T YFG
Sbjct:    9 DGKQLPKDMQ---KYWYQRYRYFRLFDQGIRMDKEGWYSVTPEKIAAHIAQRCACDVVIDAFCGVGGNAIQFAMTCHRVIAIDIDPVRLMCAKHNAKIYGVEDRIEFICGDYMTLIPRLK--ADVVFLSPPWGGPGYLTQDEFDIKR---DIPMDGEFLFNETCKITKNIAYFLPRNSNPEQIGRLAGSGPENTCEIEKNVLNHVCKAWTAYFG 214          
BLAST of EWM30320.1 vs. NCBI_GenBank
Match: gi|754344857|ref|XP_004349209.2| (Tgs1 protein [Capsaspora owczarzaki ATCC 30864] >gi|765550682|gb|KJE91303.1| Tgs1 protein [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 237.269 bits (604), Expect = 7.809e-69
Identity = 115/216 (53.24%), Postives = 148/216 (68.52%), Query Frame = 0
Query:  199 DEDGRRITTDERPPP--KYWMQRFRFFSQFDLGCRLDDEGWFSITPERIARHIAERARSDLVVDLFVGCGGNAIQFALSSHYVLAIDIDPHKLAIARHNARVYGVDDRIEFILGDALTLLPRLGTVADVLFLSPPWGGPEYLASPTYSLKQIRLEGGVSGHELFERVLSASPNVAALLPRNMDLRELAEAAGGR-PCEVEENILNYKLKTLTVYFG 411
            DE   ++ +    PP  KYW QR+R FS+FD G  +D+EGW+S+TPE IA HIA R  + +VVD F G GGN IQFALSSH+V+AIDIDP K+  ARHNAR+YGV+DRIEFI+ D   + PRL   ADV+FLSPPWGGP YL    ++L+ +    G    E+F    S SPN+A  +PRN  L +LAE AG    CE+E N L++K+KT+T Y+G
Sbjct:  273 DEQALQLPSTCAKPPHSKYWFQRYRLFSKFDEGVMMDEEGWYSVTPEVIAAHIAWRCAAGVVVDAFCGVGGNTIQFALSSHFVIAIDIDPRKIECARHNARLYGVEDRIEFIVADFFAVAPRLR--ADVVFLSPPWGGPSYLEKEVFALEDMLPRHGA---EIFRAAQSISPNIAYFVPRNTGLEQLAELAGPEGHCELEHNYLHHKVKTITAYYG 483          
The following BLAST results are available for this feature:
BLAST of EWM30320.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112979|gb|EWM30320.1|0.000e+0100.00trimethylguanosine synthase [Nannochloropsis gadit... [more]
gi|321451313|gb|EFX63009.1|1.455e-7155.56hypothetical protein DAPPUDRAFT_269241 [Daphnia pu... [more]
gi|1173957948|gb|OQS04383.1|3.715e-7042.49trimethylguanosine synthase [Thraustotheca clavata... [more]
gi|698804768|ref|XP_009835413.1|1.170e-6942.35hypothetical protein H257_10535 [Aphanomyces astac... [more]
gi|698804766|ref|XP_009835412.1|1.911e-6951.36hypothetical protein, variant 1 [Aphanomyces astac... [more]
gi|675868670|ref|XP_009019895.1|2.281e-6953.77hypothetical protein HELRODRAFT_65292, partial [He... [more]
gi|321456618|gb|EFX67720.1|3.632e-6953.77hypothetical protein DAPPUDRAFT_63741 [Daphnia pul... [more]
gi|1026265307|gb|OAC98469.1|6.336e-6954.77hypothetical protein MUCCIDRAFT_149755 [Mucor circ... [more]
gi|1183503618|gb|ORZ27216.1|7.405e-6950.47RNA cap guanine-N2 methyltransferase-domain-contai... [more]
gi|754344857|ref|XP_004349209.2|7.809e-6953.24Tgs1 protein [Capsaspora owczarzaki ATCC 30864] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna424rna424Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications