EWM26455.1, cds4224 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM26455.1
Unique Name	cds4224
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002463.1:36404..36406 +
Alignment location	CM002463.1:36545..36612 +
Alignment location	CM002463.1:36851..36970 +
Alignment location	CM002463.1:37087..37195 +
Alignment location	CM002463.1:37399..37525 +
Alignment location	CM002463.1:37731..37800 +
Alignment location	CM002463.1:38108..38177 +
Alignment location	CM002463.1:38438..38533 +
Alignment location	CM002463.1:38674..38739 +
Alignment location	CM002463.1:38908..38961 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM26455.1
Product	Ribosomal protein S8e/ribosomal biogenesis NSA2
Orig transcript id	gnl\|cribi\|Naga_100144g5.5976.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002463.1	supercontig	CM002463.1:36404..36406 +
CM002463.1	supercontig	CM002463.1:36545..36612 +
CM002463.1	supercontig	CM002463.1:36851..36970 +
CM002463.1	supercontig	CM002463.1:37087..37195 +
CM002463.1	supercontig	CM002463.1:37399..37525 +
CM002463.1	supercontig	CM002463.1:37731..37800 +
CM002463.1	supercontig	CM002463.1:38108..38177 +
CM002463.1	supercontig	CM002463.1:38438..38533 +
CM002463.1	supercontig	CM002463.1:38674..38739 +
CM002463.1	supercontig	CM002463.1:38908..38961 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR022309	Ribosomal_S8e/biogenesis_NSA2

Homology

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|585108502|gb|EWM26455.1| (Ribosomal protein S8e/ribosomal biogenesis NSA2 [Nannochloropsis gaditana])

HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV
Sbjct:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|298708726|emb|CBJ30688.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 459.529 bits (1181), Expect = 1.567e-162
Identity = 215/260 (82.69%), Postives = 243/260 (93.46%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH+YME H+K+HGER+DR E+ RKK+AREVH+RS+FAQKVHG+RAKLY  KR+KEKA MRKT+AMHQE+TNK AN +  P+GAVPAYL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKPVADDEMFKV++SGKRK K+WKRMVTKVTFVGE FTRKAPK+ERFIRPTGLRFKKAHVTHP+L+ATF LDILGVKKNPSSP+YT LGV+TKGTVIEVNVS+LGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:    1 MPQHEYMEAHKKRHGERMDRAEKRRKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|1173953501|gb|OQS01040.1| (ribosome biogenesis protein NSA2 [Achlya hypogyna])

HSP 1 Score: 448.743 bits (1153), Expect = 3.024e-158
Identity = 208/260 (80.00%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH++ME H+K+HG RLD  ER RK+EAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KTLAMH E+TNK AN +  P+GAVPAYL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKP+ADDEMFKV++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNP+SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRLDHAERTRKREAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPNSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|1173961027|gb|OQS07100.1| (ribosome biogenesis protein NSA2 [Thraustotheca clavata])

HSP 1 Score: 447.973 bits (1151), Expect = 6.516e-158
Identity = 207/260 (79.62%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH++ME H+K+HG RLD  ER RK+EAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KTLAMH E+TNK AN +  P+GAVP+YL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKP+ADDEMFKV++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNP+SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRLDHAERTRKREAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPNSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|669145414|ref|XP_008608269.1| (ribosome biogenesis protein N [Saprolegnia diclina VS20] >gi|813156388|ref|XP_012201543.1| ribosome biogenesis protein N [Saprolegnia parasitica CBS 223.65] >gi|530740435|gb|EQC38677.1| ribosome biogenesis protein N [Saprolegnia diclina VS20] >gi|641533795|gb|KDO27768.1| ribosome biogenesis protein N [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 446.047 bits (1146), Expect = 3.765e-157
Identity = 206/260 (79.23%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH++ME H+K+HG R+D  ER RK+EAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KT+AMH E+TNK AN +  P+GAVPAYL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKP+ADDEMFKV++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNP+SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRMDMVERTRKREAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTIAMHNERTNKHANDDNIPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPNSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|673016096|ref|XP_008862009.1| (hypothetical protein H310_00853 [Aphanomyces invadans] >gi|698793020|ref|XP_009829542.1| hypothetical protein H257_06127 [Aphanomyces astaci] >gi|574115109|gb|ETV80595.1| hypothetical protein H257_06127 [Aphanomyces astaci] >gi|574481212|gb|ETW08204.1| hypothetical protein H310_00853 [Aphanomyces invadans])

HSP 1 Score: 445.277 bits (1144), Expect = 8.022e-157
Identity = 206/260 (79.23%), Postives = 235/260 (90.38%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH++ME H+K+HG R D  ER RKKEAREVHRRS FAQKVHGLRAKLYN KR+KEKA M+KTLAMH E+TNK AN +  P+GAVP+YL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKP+ADDEMFKV++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP  +RFKKAHVTHP+L+ TF LDILGVKKNPSSP+YT LGV+TKGT+IEVNVSELGLVTT+GKVVWGK+AQVTNNPE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHKKRHGVRYDHHERARKKEAREVHRRSAFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPSSPLYTQLGVMTKGTIIEVNVSELGLVTTTGKVVWGKFAQVTNNPENDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|676386519|ref|XP_009036538.1| (hypothetical protein AURANDRAFT_60066 [Aureococcus anophagefferens] >gi|323452658|gb|EGB08531.1| hypothetical protein AURANDRAFT_60066 [Aureococcus anophagefferens])

HSP 1 Score: 442.965 bits (1138), Expect = 6.879e-156
Identity = 208/260 (80.00%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH++++QHRK+HGERLD  E+ RKKEAR VH  +KFA+KVHGLRAKLYN +R+KEKA MRKT+AMH+EK  +  N +GA +GAVPA+L+DREG SRAK+LSNS+KQKRAEKAGKWSVP+PKVKPVADDEMF+V QSGKRK KSWKR+VTKVTFV  NFTRK PK+ERFIRP+GL  KKAHVTHP+L+ATFCLDI+GVKKNPSS MYTTLGVITKGTVIEVNVSELGLVTT+G+VVWGKYAQVTNNPELDGCINAVLLV
Sbjct:    1 MPQHEHIDQHRKRHGERLDAPEKRRKKEARSVHENAKFAKKVHGLRAKLYNKQRFKEKATMRKTIAMHEEKEARARNDDGANDGAVPAFLLDREGASRAKILSNSIKQKRAEKAGKWSVPIPKVKPVADDEMFRVQQSGKRKKKSWKRVVTKVTFVDPNFTRKPPKYERFIRPSGLSMKKAHVTHPELKATFCLDIIGVKKNPSSQMYTTLGVITKGTVIEVNVSELGLVTTTGRVVWGKYAQVTNNPELDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|301120312|ref|XP_002907883.1| (ribosome biogenesis protein NSA2 [Phytophthora infestans T30-4] >gi|675168413|ref|XP_008893091.1| hypothetical protein PPTG_01518 [Phytophthora parasitica INRA-310] >gi|695414447|ref|XP_009526307.1| hypothetical protein PHYSODRAFT_351148 [Phytophthora sojae] >gi|262102914|gb|EEY60966.1| ribosome biogenesis protein NSA2 [Phytophthora infestans T30-4] >gi|348677432|gb|EGZ17249.1| hypothetical protein PHYSODRAFT_351148 [Phytophthora sojae] >gi|566022460|gb|ETI45371.1| hypothetical protein F443_10029 [Phytophthora parasitica P1569] >gi|567959764|gb|ETK85330.1| hypothetical protein L915_09823 [Phytophthora parasitica] >gi|567988479|gb|ETL38756.1| hypothetical protein L916_09730 [Phytophthora parasitica] >gi|568017699|gb|ETL91876.1| hypothetical protein L917_09653 [Phytophthora parasitica] >gi|568048103|gb|ETM45168.1| hypothetical protein L914_09700 [Phytophthora parasitica] >gi|568106653|gb|ETN21283.1| hypothetical protein PPTG_01518 [Phytophthora parasitica INRA-310] >gi|570326070|gb|ETO74018.1| hypothetical protein F444_10118 [Phytophthora parasitica P1976] >gi|570949927|gb|ETP15184.1| hypothetical protein F441_09972 [Phytophthora parasitica CJ01A1] >gi|570983428|gb|ETP43256.1| hypothetical protein F442_09933 [Phytophthora parasitica P10297] >gi|970653257|gb|KUF91761.1| Ribosome biogenesis protein NSA2 [Phytophthora nicotianae] >gi|970655022|gb|KUF93246.1| hypothetical protein AM588_10005262 [Phytophthora nicotianae] >gi|1214709411|gb|OWZ20594.1| Ribosome biogenesis protein N [Phytophthora megakarya])

HSP 1 Score: 441.039 bits (1133), Expect = 3.484e-155
Identity = 204/260 (78.46%), Postives = 236/260 (90.77%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH++ME HRK+HG R+D  E+ RKKEAREVHRRS+FAQKVHGLRAKLYN KR+KEKA M+KTLA+H E+TNK AN +  P+GAVP+YL+DREG+SRAKVLSN+VKQKR EKAGKW VP+PKVKP+ADDEMFKV++SGKR+ K+WKRM+TK TFVGENFTRK PK+ERFIRP+ +RFKKAHVTHP+L+ TF LDILGVKKNP SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:    1 MPQHEHMEMHRKRHGVRMDAAEKKRKKEAREVHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTLALHNERTNKHANDDEIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELKTTFQLDILGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|635365398|emb|CCI46270.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 439.884 bits (1130), Expect = 1.043e-154
Identity = 202/260 (77.69%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH+++E H+K+HG RLD+ ER RKKEARE HRRS+FAQKVHGLRAKLYN KR+KEKA M+KT+AMHQE+TNK+ N +  P+GAVP+YL+DREG+SRAK+LSN+VKQKR EKAGKW+VP+PKVKP+ADDEMFKV++SGKR+ KSWKRM+TK TFVGENFTRK PK+ERFIRP+ +RFKKAHVTHP+LQ TF L I+GVKKNP SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:    1 MPQHEHIELHKKRHGVRLDQPERHRKKEAREAHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTVAMHQERTNKQGNDDAIPDGAVPSYLLDREGVSRAKILSNTVKQKRKEKAGKWAVPIPKVKPIADDEMFKVLRSGKRRNKSWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELQTTFQLAIIGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260

[Close]

BLAST of EWM26455.1 vs. NCBI_GenBank
Match: gi|325183542|emb|CCA18003.1| (ribosome biogenesis protein NSA2 putative [Albugo laibachii Nc14])

HSP 1 Score: 439.499 bits (1129), Expect = 1.342e-154
Identity = 202/260 (77.69%), Postives = 237/260 (91.15%), Query Frame = 0

Query:    1 MPQHDYMEQHRKKHGERLDREERLRKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260
            MPQH+++E H+K+HG RLD+ ER RKKEARE HRRS+FAQKVHGLRAKLYN KR+KEKA M+KT+AMHQE+TNK+ N +  P+GAVP+YL+DREG+S+AK+LSN+VKQKR EKAGKWSVP+PKVKP+ADDEMFKV++SGKR+ KSWKRM+TK TFVGENFTRK PK+ERFIRP+ +RFKKAHVTHP+LQ TF L I+GVKKNP SP+YT LGV+TKGT+IEVNVSELGLVTTSGKVVWGKYAQ+TN PE DGCINAVLLV
Sbjct:    1 MPQHEHIELHKKRHGVRLDQPERHRKKEAREAHRRSQFAQKVHGLRAKLYNQKRFKEKAAMKKTVAMHQERTNKQGNNDAIPDGAVPSYLLDREGVSKAKILSNTVKQKRKEKAGKWSVPIPKVKPIADDEMFKVLRSGKRRNKSWKRMITKATFVGENFTRKPPKYERFIRPSAMRFKKAHVTHPELQTTFQLAIIGVKKNPQSPLYTQLGVMTKGTIIEVNVSELGLVTTSGKVVWGKYAQITNVPENDGCINAVLLV 260

The following BLAST results are available for this feature:

BLAST of EWM26455.1 vs. NCBI_GenBank

BLAST of EWM26455.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585108502\|gb\|EWM26455.1\|	0.000e+0	100.00	Ribosomal protein S8e/ribosomal biogenesis NSA2 [N...	[more]
gi\|298708726\|emb\|CBJ30688.1\|	1.567e-162	82.69	conserved unknown protein [Ectocarpus siliculosus]	[more]
gi\|1173953501\|gb\|OQS01040.1\|	3.024e-158	80.00	ribosome biogenesis protein NSA2 [Achlya hypogyna]	[more]
gi\|1173961027\|gb\|OQS07100.1\|	6.516e-158	79.62	ribosome biogenesis protein NSA2 [Thraustotheca cl...	[more]
gi\|669145414\|ref\|XP_008608269.1\|	3.765e-157	79.23	ribosome biogenesis protein N [Saprolegnia diclina...	[more]
gi\|673016096\|ref\|XP_008862009.1\|	8.022e-157	79.23	hypothetical protein H310_00853 [Aphanomyces invad...	[more]
gi\|676386519\|ref\|XP_009036538.1\|	6.879e-156	80.00	hypothetical protein AURANDRAFT_60066 [Aureococcus...	[more]
gi\|301120312\|ref\|XP_002907883.1\|	3.484e-155	78.46	ribosome biogenesis protein NSA2 [Phytophthora inf...	[more]
gi\|635365398\|emb\|CCI46270.1\|	1.043e-154	77.69	unnamed protein product [Albugo candida]	[more]
gi\|325183542\|emb\|CCA18003.1\|	1.342e-154	77.69	ribosome biogenesis protein NSA2 putative [Albugo ...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna4234	rna4234	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications