EWM30632.1, cds42 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|585113314|gb|EWM30632.1| (wd-40 repeat protein [Nannochloropsis gaditana]) HSP 1 Score: 854.744 bits (2207), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query: 1 MEAVFLILQFKWSAFGRPIYTGLLSLSLLLAINYSLSTAYLLPLLRSRVSWRQTCGWIWQSFLLLNAAPLLACEYWQFHTQGARVYCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIYKKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVEKKGLAQRMTTLEDNVEGLQAKLDQVLALLQSAVQEVDTTDDEAEDEHRTSG 419
MEAVFLILQFKWSAFGRPIYTGLLSLSLLLAINYSLSTAYLLPLLRSRVSWRQTCGWIWQSFLLLNAAPLLACEYWQFHTQGARVYCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIYKKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVEKKGLAQRMTTLEDNVEGLQAKLDQVLALLQSAVQEVDTTDDEAEDEHRTSG
Sbjct: 1 MEAVFLILQFKWSAFGRPIYTGLLSLSLLLAINYSLSTAYLLPLLRSRVSWRQTCGWIWQSFLLLNAAPLLACEYWQFHTQGARVYCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIYKKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVEKKGLAQRMTTLEDNVEGLQAKLDQVLALLQSAVQEVDTTDDEAEDEHRTSG 419
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|873240985|emb|CEL92871.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 110.923 bits (276), Expect = 2.344e-22 Identity = 111/410 (27.07%), Postives = 195/410 (47.56%), Query Frame = 0
Query: 4 VFLILQFKWSAFGRPIYTGLLSLSLLLAINYSLSTAYLLPLL----RSRV-SWRQTCGWIWQSFLLLNAAPLLACEYWQFHTQGARVYCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFR-VLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQ-ENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAG-------DQWSGRLRQIYKKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVE--KKGLAQRMTTLEDNVEGLQAKLDQVLALL 397
V IL FKW +G P+Y L L LL + + + + ++ + R V SW GWI + LL L R + +FF ++ L +SA +A F + E R++ +LS++ + LLW+K+I + RGF TG IRMI ++V D R F+ V+ + +VGF + ++L+ +Q V++ S +F T++ F + + Q + R L ++++ TI++ NLLI++MGD++D+++ + AQ R E+A +LE E +P+ FPR++ V GL+ G D+W GRL Q+ K + Q+++ +V ++ R + E + +A R+ ++ V LQ + + + A L
Sbjct: 1418 VRAILSFKWQKYGGPMYRRRLLLQLLFLLVFFIHSCVIVKYMGDDWRETVRSWNPMWGWITAAARLLLIILSLFLGLKILLLVRKRHF-RAFFSVWTWLDISACVFVMA--FIICEYLDCDRSVEAMLSSITAVLLWSKMIYFCRGFEGTGHQIRMIQEVVYDMRHFIAVMLIMIVGFGHAFHVLYLHPGYSRPSQWVEA-TAVSSTLIFLTSIGEFYEDVVSPEIQDPSPHFLRGFLICVLFVLATFFVTIVMFNLLISIMGDTHDRVKLQEIVAQNR-ERAELLLEYEQQVPRGASS---LFPRYLFV---------GLVGSRGLHELDEQDEWEGRLSQMKKAVRAELAEHQQNVDKRLEVLRMSNRDAVRRSIQEALAEDMASRLEPVQQTVLALQVQQEDIQASL 1810
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|514681367|ref|XP_004988269.1| (hypothetical protein PTSG_10886 [Salpingoeca rosetta] >gi|326434637|gb|EGD80207.1| hypothetical protein PTSG_10886 [Salpingoeca rosetta]) HSP 1 Score: 100.523 bits (249), Expect = 5.025e-19 Identity = 85/271 (31.37%), Postives = 138/271 (50.92%), Query Frame = 0
Query: 128 ALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIYKKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVEKKGLAQRMTTLEDNVEGLQAKLDQVLALLQ 398
ALA +L W +L+ YL+ F TGPL+RMI I D R+FL+VL +S+V +L ++D A V+ + G L ++L A + D F+ ++ VL ++++ V ++LLNLLIALM DSY++IQ+ A + + +A + E E + ++ ++P FP+W+ VL PK G G G QW G L + K++ + R+S G ERK +E+ + +QAK+++ L LL+
Sbjct: 1173 ALAVYLRWYRLLYYLQPFQSTGPLVRMILVICYDMRYFLLVLGISIVAAWTSFRLLLRDD----SALPVEELGDPANGLLLMFNMLLLA----DFDLATFDG-DYVVLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILHEQEKFMTKKEKRNPKLFPKWLHVLVPKGGAGSG-----GVQWQGVLHALKKEVAGVDNRVS----------------GVERK-------------VEEQMADVQAKMEEALTLLK 1400
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|514701417|ref|XP_004998276.1| (serine/Threonine protein kinase [Salpingoeca rosetta] >gi|326430531|gb|EGD76101.1| serine/Threonine protein kinase [Salpingoeca rosetta]) HSP 1 Score: 97.0561 bits (240), Expect = 6.910e-18 Identity = 109/384 (28.39%), Postives = 174/384 (45.31%), Query Frame = 0
Query: 7 ILQFKWSAFGRPIYTG-----LLSLSLLLAINY--SLSTAYLLPLLRSRVSWRQTCGWIWQSFLLLNAAPLLACEY--WQFHTQGARVYCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIYKKIEQSEKRLSQDIEGYFD-----VAGAEGK-EGAERKLVEKKGLAQR 375
+++FKW +GR + LLS+ + + + L + LL S+ S I L L AA E W++ R + F+ D L + + LA Q R + A+AS+L W ++ +L+ F TGPL+RMI I D R+FLVVL +S+V +L +D + G+ P + G L ++L A + F + + VL ++++ V ++LLNLLIALM DSY++IQ+ A + + +A + E E L DP FP+W+ VL PK + G G QW G L + +++ + + D++ D +A E + G + L EK G QR
Sbjct: 1136 VVRFKWETYGRRKFRNEANWYLLSVVFITVLTFVVDLQGNDVSQLLSSKASATDVVSVIMVLVLGLYAASEAKHEMLEWRY----LRGHWRDFWNWLDSLNIVLAFVVLATYL---GGWQHARAVL----AIASYLRWFGILYHLQAFKTTGPLVRMILAICFDMRYFLVVLGISIVAAWTSFRLLLLDD-KTVPLDGLGDP---ANGLLIMFNMLLLA----EFELDTFGGT-YAVLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARYLRERELFLSPAEKSDPKLFPKWLHVLVPK--STGVGESTPGQQWQGMLTMLKMEMKTQSRASAADVKARVDELAVRLAAMEAQVHGVQESLAEKVGALQR 1497
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|514698714|ref|XP_004996926.1| (WD-40 repeat protein [Salpingoeca rosetta] >gi|326436152|gb|EGD81722.1| WD-40 repeat protein [Salpingoeca rosetta]) HSP 1 Score: 96.2857 bits (238), Expect = 1.175e-17 Identity = 68/264 (25.76%), Postives = 127/264 (48.11%), Query Frame = 0
Query: 86 YCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLF-AALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIYKKIEQSEKRLSQDIE 348
Y S + D+L + +Y + F D A+ S++ W ++ +L+ F+ TGPL+RM+ +I+ R+FL+VL ++++ +N +L +E +P Y + L +F + S+L+ F+A ++ + L+++ + I+LLNLLIALM DSY+ IQ+ A + + +A + E E + Q ++PR++ VL P+ GG QW G L + + + ++ I+
Sbjct: 1017 YLKSVWNWLDMLRIIMSYVGVIALFV------DAHKTSRFFFAIGSYVFWFGILFFLQAFSSTGPLVRMVIEIMVGMRWFLLVLGIALLATANVFVLLVEE-----------TPAPNGYEDVADVLLTMFRLLMLSDLELLNFSAGSYTIPLKLVWVLTMILVPIVLLNLLIALMSDSYELIQDKAVVEFQRLRAQIIREQEIFFDRSAFQRKDWYPRFLHVLLPRGRNTGGA---DSSQWQGVLHALRGDMHELATTTNERID 1260
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|514680572|ref|XP_004987873.1| (Glrp1 protein [Salpingoeca rosetta] >gi|326435433|gb|EGD81003.1| Glrp1 protein [Salpingoeca rosetta]) HSP 1 Score: 95.9005 bits (237), Expect = 1.600e-17 Identity = 87/274 (31.75%), Postives = 136/274 (49.64%), Query Frame = 0
Query: 128 ALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKP---GTDGGLIQDAGDQWSGRLRQIYKKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVEKKGLAQRMTTLEDNVEGLQAKLDQVLALLQ 398
ALA +L W L+ YL+ F TGPL+RMI I D R+FL+VL +S+V +L +D +G+ P L+ L ++ + F+ ++ VL ++++ V ++LLNLLIALM DSY++IQ+ A + + +A + E +A L Q D FP W+ VL PK G DGG + QW G L + K++ V G EGK +E + + +A+ +T++ V + +L Q +ALLQ
Sbjct: 1181 ALAVYLRWYGLLYYLQPFQSTGPLVRMILAICFDMRYFLLVLGISIVAGWTSFRLLLVDDTTLP-VEGLGDPANGL-------LLMFNMLLLADFELDTFDG-DYVVLLRILFVISMVLVPVVLLNLLIALMSDSYERIQDRADIEFQLLRARILREQDAWLTQEEKMDVRRFPMWLHVLVPKGSGVGRDGGSV-----QWQGVLHALKKEVADK-------------VEGVEGKVASELSDLRAQ-MAREITSVRGQVRQMDERLAQAIALLQ 1426
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|167538082|ref|XP_001750707.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163770841|gb|EDQ84520.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 95.9005 bits (237), Expect = 1.812e-17 Identity = 91/385 (23.64%), Postives = 161/385 (41.82%), Query Frame = 0
Query: 7 ILQFKWSAFGRPIYTGLLSLSLLLAINYSLSTAYLLPLLRSRVSWRQTCGWIWQSFLLLNAAPLLAC--------EYWQF----------------HTQGARVYCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTAL----VLFAALNSNL-------DYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGR--------------YEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIYKKIEQSEKR 342
IL FKW + R ++ L ++ + +++ T L R S+ + W F+ + + ++ EY QF A + L ++ T+AS L + + ++S++A++ W +++ Y R F TG L+RM+ ++ T ++++L+V ++ +NCLY+LF DIE E+ GS+FH L LF N L + P + + L +++ + V I +LNL+I L+ D K+ + R +E A + EIE ++P L+ FP W+ +LRPK D L AGD W G ++ I + E++
Sbjct: 826 ILHFKWETYARGLFFRELGYFVMFLLAFTVFTLLAAQLDRHAYSFLELWTGSWAGFICCSLSMMIPAYSYRHLLIEYQQFLRAKGDQSLSGGTDLSGINAALTVLVDGWNLLGIILAVMTFASCCLWIMGS-------SAFAIVSSIAAFANWIQILYYFRAFELTGGLVRMVFKVFYYTGPYMMILSVVLLATTNCLYVLFS-DIETEE------------GSVFHQTLSPLHALFVTFNMVLLGEGNVTEGLPGDRPFVKALVIILFSLFMVAINIFMLNLMINLLDDFMQKLARSCLTHTRAFHQINDDEGDAFPFELARIIAEIELLMPLDDLRKAALFPEWLHILRPK--GDELLRLTAGDAWKGTVQAIKNENNHLERK 1188
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|678328818|emb|CDW79968.1| (wd-40 repeat protein [Stylonychia lemnae]) HSP 1 Score: 91.6633 bits (226), Expect = 4.263e-16 Identity = 59/186 (31.72%), Postives = 96/186 (51.61%), Query Frame = 0
Query: 86 YCSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQ 271
Y F+ FD+ +L A L +R D R +LS+LA+ L+W KL+ +LR F T LIRMI +IVKD F ++ ++++GF++ Y+L + E+ + + + + T L F F+ S L ++++F V I+LLNLLIA+MGD++DK+ E +
Sbjct: 1990 YILDFWNWFDVFSLGLNMAYL-VRDLTESDSHSNR----ILSSLAALLMWLKLLYFLRLFAPTAALIRMIVEIVKDMSVFTIIYFIAIIGFADAFYILAYNLNDNEENEMFKNNFFLAIIYSYRTGLGDFVT-------DAFDNSEDIALWYILFIFQTVFIQIVLLNLLIAIMGDTFDKVTEKRE 2163
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|1004132921|gb|KXZ41388.1| (hypothetical protein GPECTOR_500g462 [Gonium pectorale]) HSP 1 Score: 89.7373 bits (221), Expect = 1.363e-15 Identity = 73/261 (27.97%), Postives = 124/261 (47.51%), Query Frame = 0
Query: 74 EYWQFHTQGARVY---CSSFFRLFDLLTLSATYASLALRFFLREDEQDLRTLYHLLSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLF-------------QEDIERE---DAQGVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDG 315
E Q G R+Y + + D+ T + A++ LR E E+ ++ LA+ L K + RG TGPL+RM+ +++ D RFFLV+L + + F + L++LF D+ DA YG+ + + L + D+ ++S F + ++++ + TII LNLLIA+M DSY ++E+A+A E+A ++E+E +P+ L+ P + RW+ VL DG
Sbjct: 428 EVTQIALLGPRIYLGLAGAVWNWIDIATCALILAAVVLRLVASEAER-------VVLGLAAIALGLKTLKAARGLERTGPLVRMLLRVLLDIRFFLVILGIILGSFCHALFLLFYGTAMLPLPPPDGASDLATAAYGDALSQCVTYGDDYGNYVRAMMTAYRMLLGDYDFAALSSSRFYGVGWVLFVAFTFLVTIIGLNLLIAVMSDSYAVVKEHARAGWLLERARIIVEVEQSVPRSWLERPPYKVRWLHVLTHTEDMDG 681
BLAST of EWM30632.1 vs. NCBI_GenBank
Match: gi|514686360|ref|XP_004990758.1| (hypothetical protein PTSG_12745 [Salpingoeca rosetta] >gi|326431844|gb|EGD77414.1| hypothetical protein PTSG_12745 [Salpingoeca rosetta]) HSP 1 Score: 90.1225 bits (222), Expect = 1.606e-15 Identity = 79/271 (29.15%), Postives = 133/271 (49.08%), Query Frame = 0
Query: 126 LSALASWLLWAKLIVYLRGFTETGPLIRMIAQIVKDTRFFLVVLAVSVVGFSNCLYMLFQEDIEREDAQ-GVDSPIRTSYGSLFHTALVLFAALNSNLDYQPFNASNFRVLASLIYLFYCVCNTIILLNLLIALMGDSYDKIQENAQAQGRYEQAVSVLEIEAMLPQRILQDPCFFPRWVQVLRPKPGTDGGLIQDAGDQWSGRLRQIY-------KKIEQSEKRLSQDIEGYFDVAGAEGKEGAERKLVEKKGLAQRMTTLEDNVEGLQA 388
+++ AS+ LW +++ +LR F TG L+RM+ +I T FL++L V ++G +NC ++LF I EDA +D + S F L+ + L P +A V L+++ + V I +LNL+I LM D KI + +E+A + EIE + +L + FFPRW+ +L PK G G ++ D+W G ++ I ++ + RL I +FD A K +R + ++ L D++ +QA
Sbjct: 1114 VTSAASFFLWLEILYFLRAFEFTGGLVRMVFKIFYYTGPFLLILVVVLLGTANCFHVLFST-IPSEDALFQIDDSVMDSVFKTFKLLLLGDGTVEEGL--PPDDAVTGVV--KLLFVVFMVGINIFMLNLMINLMDDFMQKINDEEGDAFPFEKARIIAEIELSMGDELLSNKTFFPRWLHMLTPKGGELGE--REGIDEWQGTVQAIRAENMGLERRTRDTLDRLQAHIITHFD---AMEKRQTDRIGSLDDRVNNKIEALADSMNRMQA 1374 The following BLAST results are available for this feature:
BLAST of EWM30632.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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