EWM30351.1, cds419 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|585113010|gb|EWM30351.1| (cyclin h [Nannochloropsis gaditana]) HSP 1 Score: 867.84 bits (2241), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0 Query: 1 MSLPIKAQNTCYEIGMFDWTQGTQFRAWLYRSAEELAALRAKAHHLAKQAIHEGKAVPMPHCYASRLSPDVGKGSSSTTTEGNPSRSPSGHPSMDPTKPKLVSGIKRPRPDGEEETQDGLCLASAKDGQMRELDALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLVTCAAECDLMEPVAEYLSYCFEEEDEYDTIMKEVALIRPAVEAAQEEVPKSPTERKESRIEVWRAAMTRLKKAARWGGKGEGKKRKKSKGGAAGECNGSATDLGKYGDGDKT 419 MSLPIKAQNTCYEIGMFDWTQGTQFRAWLYRSAEELAALRAKAHHLAKQAIHEGKAVPMPHCYASRLSPDVGKGSSSTTTEGNPSRSPSGHPSMDPTKPKLVSGIKRPRPDGEEETQDGLCLASAKDGQMRELDALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLVTCAAECDLMEPVAEYLSYCFEEEDEYDTIMKEVALIRPAVEAAQEEVPKSPTERKESRIEVWRAAMTRLKKAARWGGKGEGKKRKKSKGGAAGECNGSATDLGKYGDGDKT Sbjct: 1 MSLPIKAQNTCYEIGMFDWTQGTQFRAWLYRSAEELAALRAKAHHLAKQAIHEGKAVPMPHCYASRLSPDVGKGSSSTTTEGNPSRSPSGHPSMDPTKPKLVSGIKRPRPDGEEETQDGLCLASAKDGQMRELDALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLVTCAAECDLMEPVAEYLSYCFEEEDEYDTIMKEVALIRPAVEAAQEEVPKSPTERKESRIEVWRAAMTRLKKAARWGGKGEGKKRKKSKGGAAGECNGSATDLGKYGDGDKT 419
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|299473359|emb|CBN77757.1| (cyclin H [Ectocarpus siliculosus]) HSP 1 Score: 121.324 bits (303), Expect = 3.302e-27 Identity = 67/175 (38.29%), Postives = 99/175 (56.57%), Query Frame = 0 Query: 136 LAPEDEEALLQYFAYMIQDACGHRS--ESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLV 308 L E+E + Y+A IQ+ CG S E ++R VQATA+ +F RF+LSNS+L+ DPK++++ CVFLA K E + ++ L G +I+ E LLQGL F L +HPY L+ G + + P+ + L + +D I+ TDLP LH P+R+ALA L+ Sbjct: 113 LTVEEECLVKNYYAKKIQETCGRDSADEDLRRSDKVQATAIAYFHRFYLSNSVLEHDPKILILTCVFLASKTEEQMTNVNLLAKATGLD-DLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDIVVTDLPFLHPPSRLALAALL 286
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|1210517095|dbj|GAX23989.1| (cyclin H [Fistulifera solaris]) HSP 1 Score: 113.235 bits (282), Expect = 1.458e-24 Identity = 85/285 (29.82%), Postives = 140/285 (49.12%), Query Frame = 0 Query: 136 LAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKD----VFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVK---KLGLTPDSLSRLCTAGQETI----------DLILPTDLPLLHAPARIALAVLVTC-AAECDLMEPVAEYLSYCFEEEDEYDTIMKEVALIRPAVEAAQE---EVPKSPTERKESRIEVWRAAMTRLKKAARWG-----GKGEGKKRKK 394 L ++E L+ ++A+ + + G + I+R + ATA F +RFFLSNS++ +DPKVV++A FLA KVE + + +L++ + II E LLQGL F L+ +HPY L L K L + +S + +GQ+ I D ++ +D+PLL+AP ++ +A L+ + DL + YL F E++ VA++ P ++ E E+ + P E + +A +LKK WG KGE KK+++ Sbjct: 49 LTADEETTLVNFYAHKLPNLIGPHALRIRRESKITATAALFLRRFFLSNSVMLYDPKVVMVAAAFLASKVEDATVDIRQLEEGTEAMNAPVPTSDIITTEVALLQGLHFDLRCFHPYKAVVALTEDLRTFLKTKVGQALFVRNNSSNSSMISGQDLIPIYERARTLVDHVVLSDIPLLYAPGQVGMAALMLAQQQQNDLQMDLLGYLKVRFPEQN--------VAVLEPVLQHLCEMLSELEQQP----EDDLSTLKAIHKKLKKVRVWGNSTKNNKGESKKKRR 321
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|1210522354|dbj|GAX18757.1| (cyclin H [Fistulifera solaris]) HSP 1 Score: 110.923 bits (276), Expect = 1.335e-23 Identity = 81/279 (29.03%), Postives = 138/279 (49.46%), Query Frame = 0 Query: 136 LAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKD----VFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKV--NHVKKLGLTPDSLSRLCTAGQETI----------DLILPTDLPLLHAPARIALAVLVTC-AAECDLMEPVAEYLSYCFEEEDEYDTIMKEVALIRPAVEAAQEEVPKSPTERKESRIEVWRAAMTRLKKAARWG---GKGEGKKRKK 394 L ++E L+ ++A+ + + G + I+R + ATA F +RFFLSNS+L +DPKVV++A FLA KVE + + +L++ + II E LL+GL F L+ +HPY L L V + ++ + +GQ+ I D + +D+PLL+AP ++ LA L+ + +L + YL F E++ VA++ P ++ + + + ++ E + +A +LKK WG KGE KK++K Sbjct: 74 LTADEETTLVHFYAHKLPNLIGPHALRIRRESKITATAALFLRRFFLSNSVLLYDPKVVMVAAAFLASKVEDATVDIRQLEEGTEAMNAPVPTSDIITTEVALLEGLHFDLRCFHPYKAVVALTEDLRTFLKTKVGQALFVRNNNNNSMISGQDLIPIYERARTLVDHAVLSDIPLLYAPGQVGLAALMLAQQQQTELQMDLLGYLKVRFPEQN--------VAVLEPILQHLCDMLSQL-EQQPEDDLSTLKAIHKKLKKVRVWGSKNNKGESKKKRK 343
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|1183337871|gb|ORX66881.1| (cyclin-like protein [Linderina pennispora]) HSP 1 Score: 106.301 bits (264), Expect = 3.386e-22 Identity = 72/242 (29.75%), Postives = 123/242 (50.83%), Query Frame = 0 Query: 132 ELDALAPEDEEALLQYFAYMIQD-ACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEK--YGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLVTCAAE--CDLMEPVAEYLSYCFEEEDEYDTIMKEVALIRPAVEAAQEEVPK-SPTERKESRI 367 E + L P DE L+ Y+ I+D A ++ S V+ATA+TF KRF+L N + D+ PK +++AC++LA KVE ++++ + ++++E + Q L F L +HPY P +G L+ +V+ + + L + Q+ ID + TDL + PA+IAL + A E CD V +YL+ F+ + + + P ++ QEE+ K P KE+++ Sbjct: 60 ENNMLTPADELGLINYYLQKIRDYATVYKFNST-----VKATAITFMKRFYLHNVVFDYPPKGIMLACLYLATKVENSFVKIDDFTKPLARTKVTNSDVLDYEFVVTQSLQFDLAVHHPYRPAYGFF--LDMQTYVEDITV----LQKTYELAQKYIDQAVFTDLVFYYQPAQIALGAIKLAAVETRCD----VDQYLTSQFDA--------RALESLYPILDNVQEEIRKYQPVSMKEAQV 278
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|675191621|ref|XP_008904695.1| (hypothetical protein PPTG_10932 [Phytophthora parasitica INRA-310] >gi|566025005|gb|ETI47916.1| hypothetical protein F443_07960 [Phytophthora parasitica P1569] >gi|567962319|gb|ETK87845.1| hypothetical protein L915_07788 [Phytophthora parasitica] >gi|567991047|gb|ETL41264.1| hypothetical protein L916_07718 [Phytophthora parasitica] >gi|568020333|gb|ETL94465.1| hypothetical protein L917_07603 [Phytophthora parasitica] >gi|568050765|gb|ETM47697.1| hypothetical protein L914_07682 [Phytophthora parasitica] >gi|568095490|gb|ETN10258.1| hypothetical protein PPTG_10932 [Phytophthora parasitica INRA-310] >gi|570328685|gb|ETO76633.1| hypothetical protein F444_08005 [Phytophthora parasitica P1976] >gi|570952456|gb|ETP17713.1| hypothetical protein F441_07931 [Phytophthora parasitica CJ01A1] >gi|570986860|gb|ETP45778.1| hypothetical protein F442_07899 [Phytophthora parasitica P10297]) HSP 1 Score: 107.071 bits (266), Expect = 5.426e-22 Identity = 82/291 (28.18%), Postives = 138/291 (47.42%), Query Frame = 0 Query: 22 GTQFRAWLYRSAEELAALRAKAHHLAKQAIHEGKAVPMPHCYASRLSPDVGKGSSSTTTEGNPSRSPSGHPSMDPTKPKLVSGIKRPRPDGEEETQDGLCLASAKDGQMREL----DALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKV-NHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVL 307 T F W++ SAEELA +R H K+A+ RL + + ++ +RS +G P+ + ++ +E D L A++ +L + L PE E L ++ IQ++C ++ ++ V+ A+ FKRF+LSNS+++F PK ++ +++AGKVE +Y+ + + D + + II E LL+G+ F L YHP+ G ++ V K L L +L ++ +L TDLPLLH P+ +ALA L Sbjct: 7 STHFNNWVF-SAEELARVRRLQHVKTKRAL--------------RLEREEAQKPEASAGSSRKARSFAG------LVPRSSTAVRDTFDWNDEVDVDLSALEEAEEKANLQLTPLLEFLNPEQETLLRVFYEEKIQESCS--AQFLRTSDKVKCCAMMLFKRFYLSNSVMEFHPKYLVPTAIYVAGKVEEQYMSVDTVADQLHVDH-KFIIGHEMILLEGVRFQLIMYHPFRTLLGFLDDFRAFAKQVLKKDLPATVLQKLHANSTAMLNDMLLTDLPLLHYPSYLALAAL 273
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|301122267|ref|XP_002908860.1| (cyclin-H, putative [Phytophthora infestans T30-4] >gi|262099622|gb|EEY57674.1| cyclin-H, putative [Phytophthora infestans T30-4]) HSP 1 Score: 106.686 bits (265), Expect = 7.921e-22 Identity = 85/297 (28.62%), Postives = 137/297 (46.13%), Query Frame = 0 Query: 22 GTQFRAWLYRSAEELAALRAKAHHLAKQAIHEGKAVPMPHCYASRLSPDVGKGSSSTTTEGNPSRS-----PSGHPSMDPTKPKLVSGIKRPRPDGEEETQDGLC-LASAKDGQMREL----DALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKV-NHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVL 307 T F W++ S EELA +R H K+A+ RL + + ++ G +RS PS +M R D +E L L A++ +L + L PE E L ++ IQ++C ++ ++ V+ A+ FKRF+LSNS+++F PK ++ +++AGKVE +Y+ + + D + + II E LL+G+ F L YHP+ G ++ V K L L +L ++ +L TDLPLLH P+ +ALA L Sbjct: 7 STHFNNWVF-STEELARVRRLQHVKTKRAL--------------RLEREESQKPEASANNGRKARSFAALVPSSSTAM------------RDTFDWNDEVDVDLSGLEEAEEKANLQLTPLLEFLNPEQEALLRAFYEEKIQESCS--AQFLRTSDKVKCCAVLLFKRFYLSNSVMEFHPKFIVPTAIYVAGKVEEQYMSVDTVADQLHVDH-KFIIGHEMVLLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLKKDLPATVLQKLHAISTAMVNDMLLTDLPLLHYPSYLALAAL 273
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|1214713169|gb|OWZ24074.1| (Cyclin-H [Phytophthora megakarya]) HSP 1 Score: 106.301 bits (264), Expect = 1.179e-21 Identity = 79/262 (30.15%), Postives = 130/262 (49.62%), Query Frame = 0 Query: 133 LDALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPD----SLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLVTCAAE---------CDLMEP-VAEYLSYC-FEEEDEYDTIMKEVALIRPAVEAAQEEVPKSPTERKESRIEVWRAAMTRLKK 379 L+ L+PE E L +++ IQ++C ++ ++ V+ A+ FKRF+LSNS+++F PK ++ +++AGKVE +Y+ + + D + + II E LL+G+ F L YHP+ G ++ K LT D L +L ++ +L TDLPLLH P+ +ALA L E C L+ V EY+ F ++ D + + I A+EA + E KS E R + + +LK+ Sbjct: 101 LEFLSPEQETLLREFYEEKIQESCS--AQFLRTSDKVKCCAMLLFKRFYLSNSVMEFHPKYLVPTAIYVAGKVEEQYMSVDTVADQLHVDH-KFIIGHEMILLEGVRFQLIMYHPFRTLLGFLDDFRAFT---KQVLTKDLPATVLQKLHANSTALLNDMLLTDLPLLHYPSYLALAALWHVTDEVAASSGEKACGLVSADVLEYVKRSKFSKDQPVDEVSSRLMEITQAIEATKNEKEKSGDEAVLHRAKQVKQIYKKLKQ 356
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|527203134|gb|EPS69696.1| (hypothetical protein M569_05066, partial [Genlisea aurea]) HSP 1 Score: 102.834 bits (255), Expect = 5.860e-21 Identity = 62/185 (33.51%), Postives = 99/185 (53.51%), Query Frame = 0 Query: 135 ALAPEDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSEL-KDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVLVTCAAECDLME 318 AL PE+E+ L ++ + IQD C ++ K +QATAL +FKRF+L S+++ PK +++ C++ A K E ++ EL K + E+ + I+ E +LQ LGF L Y PY G +N +E +++ D L + + + +D I+ TD PLL P ++ALA L ME Sbjct: 75 ALKPEEEQLLRAFYEFKIQDVC----DAFKFPRKIQATALIYFKRFYLQWSVMEHHPKNIMLTCIYAACKSEENHVSAEELGKGI--EQDHQMILNNEMLVLQSLGFDLIVYAPYRALEGFVNDIEATRESQEV-YQLDKLKNVHESAKLEVDKIMRTDAPLLFPPGQLALAALRRSVEAHKFME 252
BLAST of EWM30351.1 vs. NCBI_GenBank
Match: gi|635366872|emb|CCI44847.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 103.219 bits (256), Expect = 1.361e-20 Identity = 54/169 (31.95%), Postives = 97/169 (57.40%), Query Frame = 0 Query: 139 EDEEALLQYFAYMIQDACGHRSESIKRGLHVQATALTFFKRFFLSNSMLDFDPKVVLMACVFLAGKVEYEYIRLSELKDVFGEKYGRKIIEFEGCLLQGLGFCLKAYHPYNPFFGLINGLEKVNHVKKLGLTPDSLSRLCTAGQETIDLILPTDLPLLHAPARIALAVL 307 E+E+ L++++ +Q++C ++ + V+++A+ FKRF+LSNS+ +F PK ++ +++A KVE +YI + + + + + +I E LL+G+ F L YHP+ P G ++ L K L + L L T ++ L TD+PLL+ PA++ALA L Sbjct: 112 EEEKTLVEFYESKVQESC---TQLFRTSEKVKSSAIQLFKRFYLSNSVAEFHPKYLVPTVIYVAAKVEEQYISVETIAEHLKVDH-KHVIGHEMILLEGVRFHLIMYHPFRPLLGFVDDLRLYAKAKGKQLPLELLQILHTKASVVVNEFLLTDVPLLYHPAQLALAAL 276 The following BLAST results are available for this feature:
BLAST of EWM30351.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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