EWM26477.1, cds4188 (CDS) Nannochloropsis gaditana

Overview
NameEWM26477.1
Unique Namecds4188
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1097191..1099455 +

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Properties
Property NameValue
Protein idEWM26477.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100045g23.1669.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1097191..1099455 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26477.1 vs. NCBI_GenBank
Match: gi|585108530|gb|EWM26477.1| (hypothetical protein Naga_100045g23 [Nannochloropsis gaditana])

HSP 1 Score: 1520.37 bits (3935), Expect = 0.000e+0
Identity = 754/754 (100.00%), Postives = 754/754 (100.00%), Query Frame = 0 
Query:    1 MSETGSNVQEDTDDLSPGRRTSAEARLKSEHSDPHVYEDTQGSSDSFLDAAPTSQGTPTSSHEKEVAAELRQVLSTGSFAGLLMQLAGSSGSSCGSSKGSADSTSKVSASTEVAVDEGKREKRRRQLSPGLVDQRHLEGQAHSMEGTENPQKIEAPPPLIAFAPRPRTLETPALGVRMAATDHTTSSMQPVVSRGQSGTSDSAGSLNFANMSPFSSIEFPIGPTLLSSPSFPSSSSEMPEPVTSLGLLEGQASMSTDWQEGVPLDSPSEIFMSQGGDGGSGMVMGAPSTFSAPAPTAGDAVDERLVGLASPATSTATSTTSTMHTTTTMMDLQSGQAEGSGVGYLPVLNADTHFPFSASTPDETLSLPSPSVAAASLGPPADRTRDWQGRKGLRSETKTGSPLGAEHPRVITTPTLATLSSGGARGQGQPRQIPPPPLPLPAASPMATATMMMGHLGFNIYYAPPPVPSSLPAASKASKSPAGAANRAAAATLTSGSRGSRTRRRSASLSTSSTPSALPVAAIPRAAAATRPTIDTAAEVAESSTGLLRGSYRCGRCGGMKKNHVCPYLYEEHLERRDAGTEVDLVLTRGDQDKGGRPNMPSGMSFHFLTIRARENVKAGFQTLLASTPELDIRMETGIPSTHTSSSSAPLLPLPVPMSVHGQAMAHSALYDNMNMSRSIQEQEPQGQRRQLQQQQDVYPSPDQAPAIDSQVPTDMEEDQAVTLVRQCYYVRVHSDSYKDEGEGGKAWLYMEKE 754
            MSETGSNVQEDTDDLSPGRRTSAEARLKSEHSDPHVYEDTQGSSDSFLDAAPTSQGTPTSSHEKEVAAELRQVLSTGSFAGLLMQLAGSSGSSCGSSKGSADSTSKVSASTEVAVDEGKREKRRRQLSPGLVDQRHLEGQAHSMEGTENPQKIEAPPPLIAFAPRPRTLETPALGVRMAATDHTTSSMQPVVSRGQSGTSDSAGSLNFANMSPFSSIEFPIGPTLLSSPSFPSSSSEMPEPVTSLGLLEGQASMSTDWQEGVPLDSPSEIFMSQGGDGGSGMVMGAPSTFSAPAPTAGDAVDERLVGLASPATSTATSTTSTMHTTTTMMDLQSGQAEGSGVGYLPVLNADTHFPFSASTPDETLSLPSPSVAAASLGPPADRTRDWQGRKGLRSETKTGSPLGAEHPRVITTPTLATLSSGGARGQGQPRQIPPPPLPLPAASPMATATMMMGHLGFNIYYAPPPVPSSLPAASKASKSPAGAANRAAAATLTSGSRGSRTRRRSASLSTSSTPSALPVAAIPRAAAATRPTIDTAAEVAESSTGLLRGSYRCGRCGGMKKNHVCPYLYEEHLERRDAGTEVDLVLTRGDQDKGGRPNMPSGMSFHFLTIRARENVKAGFQTLLASTPELDIRMETGIPSTHTSSSSAPLLPLPVPMSVHGQAMAHSALYDNMNMSRSIQEQEPQGQRRQLQQQQDVYPSPDQAPAIDSQVPTDMEEDQAVTLVRQCYYVRVHSDSYKDEGEGGKAWLYMEKE
Sbjct:    1 MSETGSNVQEDTDDLSPGRRTSAEARLKSEHSDPHVYEDTQGSSDSFLDAAPTSQGTPTSSHEKEVAAELRQVLSTGSFAGLLMQLAGSSGSSCGSSKGSADSTSKVSASTEVAVDEGKREKRRRQLSPGLVDQRHLEGQAHSMEGTENPQKIEAPPPLIAFAPRPRTLETPALGVRMAATDHTTSSMQPVVSRGQSGTSDSAGSLNFANMSPFSSIEFPIGPTLLSSPSFPSSSSEMPEPVTSLGLLEGQASMSTDWQEGVPLDSPSEIFMSQGGDGGSGMVMGAPSTFSAPAPTAGDAVDERLVGLASPATSTATSTTSTMHTTTTMMDLQSGQAEGSGVGYLPVLNADTHFPFSASTPDETLSLPSPSVAAASLGPPADRTRDWQGRKGLRSETKTGSPLGAEHPRVITTPTLATLSSGGARGQGQPRQIPPPPLPLPAASPMATATMMMGHLGFNIYYAPPPVPSSLPAASKASKSPAGAANRAAAATLTSGSRGSRTRRRSASLSTSSTPSALPVAAIPRAAAATRPTIDTAAEVAESSTGLLRGSYRCGRCGGMKKNHVCPYLYEEHLERRDAGTEVDLVLTRGDQDKGGRPNMPSGMSFHFLTIRARENVKAGFQTLLASTPELDIRMETGIPSTHTSSSSAPLLPLPVPMSVHGQAMAHSALYDNMNMSRSIQEQEPQGQRRQLQQQQDVYPSPDQAPAIDSQVPTDMEEDQAVTLVRQCYYVRVHSDSYKDEGEGGKAWLYMEKE 754
[Close]
BLAST of EWM26477.1 vs. NCBI_GenBank
Match: gi|553188752|ref|XP_005854860.1| (hypothetical protein NGA_0381100 [Nannochloropsis gaditana CCMP526] >gi|422294203|gb|EKU21503.1| hypothetical protein NGA_0381100 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1048.88 bits (2711), Expect = 0.000e+0
Identity = 516/517 (99.81%), Postives = 516/517 (99.81%), Query Frame = 0 
Query:  238 MPEPVTSLGLLEGQASMSTDWQEGVPLDSPSEIFMSQGGDGGSGMVMGAPSTFSAPAPTAGDAVDERLVGLASPATSTATSTTSTMHTTTTMMDLQSGQAEGSGVGYLPVLNADTHFPFSASTPDETLSLPSPSVAAASLGPPADRTRDWQGRKGLRSETKTGSPLGAEHPRVITTPTLATLSSGGARGQGQPRQIPPPPLPLPAASPMATATMMMGHLGFNIYYAPPPVPSSLPAASKASKSPAGAANRAAAATLTSGSRGSRTRRRSASLSTSSTPSALPVAAIPRAAAATRPTIDTAAEVAESSTGLLRGSYRCGRCGGMKKNHVCPYLYEEHLERRDAGTEVDLVLTRGDQDKGGRPNMPSGMSFHFLTIRARENVKAGFQTLLASTPELDIRMETGIPSTHTSSSSAPLLPLPVPMSVHGQAMAHSALYDNMNMSRSIQEQEPQGQRRQLQQQQDVYPSPDQAPAIDSQVPTDMEEDQAVTLVRQCYYVRVHSDSYKDEGEGGKAWLYMEKE 754
            MPEPVTSLGLLEGQASMSTDWQEGVPLDSPSEIFMSQGGDGGSGMVMGAPSTFSAPAPTAGDAVDERLVGLASPATSTATSTTSTMHTTTTMMDLQSGQAEGSGVGYLPVLNADTHFPFSASTPDETLSLPSPSVAAASLGPPADRTRDWQGRKGLRSETKTGSPLGAEHPRVITTPTLATLSSGGARGQGQPRQIPPPPLPLPAASPMATATMMMGHLGFN YYAPPPVPSSLPAASKASKSPAGAANRAAAATLTSGSRGSRTRRRSASLSTSSTPSALPVAAIPRAAAATRPTIDTAAEVAESSTGLLRGSYRCGRCGGMKKNHVCPYLYEEHLERRDAGTEVDLVLTRGDQDKGGRPNMPSGMSFHFLTIRARENVKAGFQTLLASTPELDIRMETGIPSTHTSSSSAPLLPLPVPMSVHGQAMAHSALYDNMNMSRSIQEQEPQGQRRQLQQQQDVYPSPDQAPAIDSQVPTDMEEDQAVTLVRQCYYVRVHSDSYKDEGEGGKAWLYMEKE
Sbjct:    1 MPEPVTSLGLLEGQASMSTDWQEGVPLDSPSEIFMSQGGDGGSGMVMGAPSTFSAPAPTAGDAVDERLVGLASPATSTATSTTSTMHTTTTMMDLQSGQAEGSGVGYLPVLNADTHFPFSASTPDETLSLPSPSVAAASLGPPADRTRDWQGRKGLRSETKTGSPLGAEHPRVITTPTLATLSSGGARGQGQPRQIPPPPLPLPAASPMATATMMMGHLGFNTYYAPPPVPSSLPAASKASKSPAGAANRAAAATLTSGSRGSRTRRRSASLSTSSTPSALPVAAIPRAAAATRPTIDTAAEVAESSTGLLRGSYRCGRCGGMKKNHVCPYLYEEHLERRDAGTEVDLVLTRGDQDKGGRPNMPSGMSFHFLTIRARENVKAGFQTLLASTPELDIRMETGIPSTHTSSSSAPLLPLPVPMSVHGQAMAHSALYDNMNMSRSIQEQEPQGQRRQLQQQQDVYPSPDQAPAIDSQVPTDMEEDQAVTLVRQCYYVRVHSDSYKDEGEGGKAWLYMEKE 517
The following BLAST results are available for this feature:
BLAST of EWM26477.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585108530|gb|EWM26477.1|0.000e+0100.00hypothetical protein Naga_100045g23 [Nannochlorops... [more]
gi|553188752|ref|XP_005854860.1|0.000e+099.81hypothetical protein NGA_0381100 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4198rna4198Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications