EWM26493.1, cds4181 (CDS) Nannochloropsis gaditana

Overview
NameEWM26493.1
Unique Namecds4181
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1066237..1067610 +
Alignment locationCM002462.1:1067895..1068090 +
Alignment locationCM002462.1:1068398..1068579 +
Alignment locationCM002462.1:1068883..1069431 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26493.1
Productprotoporphyrinogen oxidase
Orig transcript idgnl|cribi|Naga_100646g3.4625.mrna
GenePPX
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1066237..1067610 +
CM002462.1supercontigCM002462.1:1067895..1068090 +
CM002462.1supercontigCM002462.1:1068398..1068579 +
CM002462.1supercontigCM002462.1:1068883..1069431 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
GO:0004729oxygen-dependent protoporphyrinogen oxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR002937Amino_oxidase
IPR004572Protoporphyrinogen_oxidase
IPR027418PPOX_C
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|585108547|gb|EWM26493.1| (protoporphyrinogen oxidase [Nannochloropsis gaditana])

HSP 1 Score: 1533.47 bits (3969), Expect = 0.000e+0
Identity = 766/766 (100.00%), Postives = 766/766 (100.00%), Query Frame = 0
Query:    1 MKRLVFLFCLTCAVQIGVRKAVGRGWRGVGRSAVSYRCLFYFAQIFPTPRQAHGYPRREAAPLKKSNLGQWHALLRGASSTSIVLRGDFIGRRTKMTPCRQSLGLPVAVALLSCVFLSVRAFHLPSPAIRTRLSSSTSISASHGRPRSLPSLYASSTSSPPAFGQFLTDLLGDLFAGPEKVEETDVLVVGSGISGSTTAFYLNKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDIPFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTKPPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKAPAPQTSVPPSPPSALAPGPVAVPSSPPSSPPPASDASDSTAPAVAAAAAVSTVAGMGSTGGGREGGQPRVPEGENSRPRTVVAAEEGGRGGSCRVGEGERRRPCRRRVRIRVG 766
            MKRLVFLFCLTCAVQIGVRKAVGRGWRGVGRSAVSYRCLFYFAQIFPTPRQAHGYPRREAAPLKKSNLGQWHALLRGASSTSIVLRGDFIGRRTKMTPCRQSLGLPVAVALLSCVFLSVRAFHLPSPAIRTRLSSSTSISASHGRPRSLPSLYASSTSSPPAFGQFLTDLLGDLFAGPEKVEETDVLVVGSGISGSTTAFYLNKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDIPFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTKPPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKAPAPQTSVPPSPPSALAPGPVAVPSSPPSSPPPASDASDSTAPAVAAAAAVSTVAGMGSTGGGREGGQPRVPEGENSRPRTVVAAEEGGRGGSCRVGEGERRRPCRRRVRIRVG
Sbjct:    1 MKRLVFLFCLTCAVQIGVRKAVGRGWRGVGRSAVSYRCLFYFAQIFPTPRQAHGYPRREAAPLKKSNLGQWHALLRGASSTSIVLRGDFIGRRTKMTPCRQSLGLPVAVALLSCVFLSVRAFHLPSPAIRTRLSSSTSISASHGRPRSLPSLYASSTSSPPAFGQFLTDLLGDLFAGPEKVEETDVLVVGSGISGSTTAFYLNKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDIPFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTKPPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKAPAPQTSVPPSPPSALAPGPVAVPSSPPSSPPPASDASDSTAPAVAAAAAVSTVAGMGSTGGGREGGQPRVPEGENSRPRTVVAAEEGGRGGSCRVGEGERRRPCRRRVRIRVG 766          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|553188173|ref|XP_005854747.1| (protoporphyrinogen IX oxidase, partial [Nannochloropsis gaditana CCMP526] >gi|422294307|gb|EKU21607.1| protoporphyrinogen IX oxidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1229.93 bits (3181), Expect = 0.000e+0
Identity = 615/621 (99.03%), Postives = 616/621 (99.19%), Query Frame = 0
Query:   52 AHGYPRREAAPLKKSNLGQWHALLRGASSTSIVLRGDFIGRRTKMTPCRQSLGLPVAVALLSCVFLSVRAFHLPSPAIRTRLSSSTSISASHGRPRSLPSLYASSTSSPPAFGQFLTDLLGDLFAGPEKVEETDVLVVGSGISGSTTAFYLNKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDIPFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTKPPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKAPAPQTSVPPSPPSALAPGP 672
            AHGYPRREAAPLKKSNLGQWHALLRGASSTSIVLRGDFIGRRTKM PCRQSLGLPVAVALLSCVFLSVRAFHLPSPAIRTR+SSSTSISASHGRPRSLPSLYASSTSSPPAFGQFLTDLLGDLFAGPEKVEETDVLVVGSGISGSTTAFYLNKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDIPFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTKPPVVPEHPVYKGGQLGSFKRGLQSMPLA AKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPG  PPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLK DAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKAPAPQTSVPPSPPSALAPGP
Sbjct:    1 AHGYPRREAAPLKKSNLGQWHALLRGASSTSIVLRGDFIGRRTKMIPCRQSLGLPVAVALLSCVFLSVRAFHLPSPAIRTRISSSTSISASHGRPRSLPSLYASSTSSPPAFGQFLTDLLGDLFAGPEKVEETDVLVVGSGISGSTTAFYLNKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDIPFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTKPPVVPEHPVYKGGQLGSFKRGLQSMPLAAAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPG-GPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKPDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKAPAPQTSVPPSPPSALAPGP 620          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|298709811|emb|CBJ31610.1| (protoporphyrinogen oxidase, putative chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0
Identity = 309/502 (61.55%), Postives = 371/502 (73.90%), Query Frame = 0
Query:  168 TDLLGDLF-AGPEKVEETDVLVVGSGISGSTTAFYLNKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDI-PFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTK-----PPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKL--LRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKAPAPQTSV 660
            T +  D+F AGP  VE+ D  VVGSGISGST  FYL+K GV C++ EA+  VGGNVISK E GFLWEEGPNSFQPT  +M+ TVD+GL ++LVLAD +LPRFV+W+  L+ LP  L  I   F LLS PG+IRAGLGA+G +  PP D EESVKEFVTRHLG E FER+IDPFVSGVYAGDPSKL++KAALKKV RLE LGG G++DGA+LR++E  R +     P    + P Y+GG LGSF+ GLQ +P A  KA+GK+K+R S  +  +   +   GGY   F TP+G KR++ +    TAPAH +  +  LR +VPEAARL +VYYPPVASVTLAYPK++F+  L GFGNLIPR MKIRTLGTIWSSSLFPGRAP  Y MLL+YIGGAQDP I +LS  +IV E DRDI+ +LLK DAP PK+LG RLW TAIPQY +GHL IL  ++ G+K  PGL +GGNY TGVAFGDCV YG EEA RI+  L + A   Q SV
Sbjct:   46 TTMAADIFKAGP--VEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKKEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIRAGLGAIGLVLPPPSDYEESVKEFVTRHLGPEAFERLIDPFVSGVYAGDPSKLAIKAALKKVARLEVLGGPGLIDGAILRLKERARQEKELPEPLQSEDLPTYQGGSLGSFREGLQMLPNAALKAMGKDKMRTSWVMKGI--KRSEDGGYLLAFDTPKGPKRLQAKVAVCTAPAHRLASVEGLRDIVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRTLGTIWSSSLFPGRAPEGYAMLLNYIGGAQDPAIKDLSDDEIVAECDRDIRTILLKDDAPPPKVLGCRLWKTAIPQYQRGHLAILEELQEGLKAAPGLRMGGNYITGVAFGDCVQYGYEEAERIEEMLKSGALDGQQSV 543          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|546323893|ref|XP_005718212.1| (unnamed protein product [Chondrus crispus] >gi|507114802|emb|CDF38327.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0
Identity = 274/475 (57.68%), Postives = 356/475 (74.95%), Query Frame = 0
Query:  183 ETDVLVVGSGISGSTTAFYLNKA--GVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWKEKLYALPGGLGDIPFFNLLSIPGRIRAGLGALGFIRGPPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELG-GRGILDGALLRIQEIQRTKPPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPA-PKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKA 653
            E D LV+GSGISGS+ AF L++A      LLTEA+PVVGGNVIS++E G+ WEEGPN+FQP   +++  VD+GL D++VLAD +LPRFVYW ++L+ALP    DIP F LLS+PG IRAGLGA GF+  PPK +EES+K+F+TRHLGAE F+++IDPFVSGVYAGDPSKLSM AA KK+  L+ELG  +GI++GA++RIQ+ ++  PP  PE P +KGG LGSF++GL  +P AVA+ LG ++V+LS KL+S+  GK   G Y A ++TP+G K +  +++AITAPA+    +L  L P    + ++ YP V S+TLAYPK  FREPL GFGNLIPRSM IRTLGTIWSS LFPGRAP    +LLSYIGGAQD  I EL+  ++V  VD DIKK+L+K  +   P ++G R W  AIPQYN G+ DI+   E  VK+HPG+FLGGNY +GVAFGDCV +G++ A ++  Y+AA+A
Sbjct:   20 EVDALVIGSGISGSSLAFTLSQASPATSLLLTEARPVVGGNVISRNERGYTWEEGPNTFQPAPHIIRMAVDLGLRDDIVLADHTLPRFVYWDQRLFALPLSPNDIPTFRLLSLPGAIRAGLGAAGFVMPPPKGREESIKDFITRHLGAEVFQKMIDPFVSGVYAGDPSKLSMSAAFKKIYALQELGMTQGIVEGAIIRIQQKKKEAPPPDPELPTWKGGALGSFRKGLGMLPQAVAERLG-DRVKLSWKLVSL--GKESDGRYRATYETPEGTKTVIARSVAITAPANATAGILGDLAPGIKAIEEINYPTVWSITLAYPKNEFREPLSGFGNLIPRSMGIRTLGTIWSSCLFPGRAPEGMELLLSYIGGAQDAAIKELTEDEVVATVDADIKKILMKDGSEVKPVVVGARKWDRAIPQYNIGYWDIMGKAEEAVKEHPGIFLGGNYTSGVAFGDCVQWGIDTAPKVAEYVAAQA 491          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|1109178674|gb|APF46091.1| (plastid protoporphyrinogen oxidase, partial [Euglena viridis])

HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0
Identity = 289/492 (58.74%), Postives = 360/492 (73.17%), Query Frame = 0
Query:  183 ETDVLVVGSGISGSTTAFYL--NKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWK--------EKLYALPGGL-GDIPFFNLLSIPGRIRAGLGALGFIRGPPKDK-EESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELG--GRGILDGALLRIQEIQRTKP--PVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFRE--------PLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLA 650
            E DVLVVGSGISGS TA  L  N+     LL E  PVVGGNVISK++  F WEEGPNSFQPT  +M+A  ++G+ DELVLAD SLPRFVYW+          L+ALP  L GD+  FNLL+IPG+IRA  GALGFI  PP    EES++EFVTRHLG ETFER+IDPFVSGVYAGDP +L+M+AALKK+ RLE LG  G G++ GA+ R +E+ + K   P  P  P YKGGQLGSF++GLQ++P AVAK LG ++VR S  L  + +  GP   + A F TP G K+++ +++A+TAP  VV K+   LVP AA L  +Y PPVASVT+AY K  F+E        PL GFG+L+PR MK+R+LGTIWSSSLFPGRAP  + +LL+YIGGA+D GIA++S ++IVK+VD D  K+LLKSDAPA K+LG R+W TAIPQY +GHLDIL ++E    K PGL+LGGNYRTGVAFGDCV YG++EA +I  +L+
Sbjct:   45 EVDVLVVGSGISGSCTAHNLFKNQNVKNILLVERNPVVGGNVISKTDGEFTWEEGPNSFQPTPAIMRAVYELGITDELVLADGSLPRFVYWEGDGAGQKLANLHALPTNLPGDLLDFNLLTIPGKIRAAFGALGFISPPPPPPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDQLAMRAALKKIHRLEGLGDLGPGLVSGAVNRFKELAKDKKENPADPAWPTYKGGQLGSFRKGLQTLPNAVAKELGPDRVRTSWSLTGLAQ-DGPH--FLATFDTPDGPKKVRAKSVAVTAPTRVVSKVCTDLVPTAAGLDKIYAPPVASVTMAYRKEWFKELPGAQPGKPLVGFGHLLPRRMKVRSLGTIWSSSLFPGRAPEGWELLLTYIGGARDRGIADMSEEEIVKQVDADNHKILLKSDAPAGKLLGCRVWQTAIPQYCRGHLDILDALEKDEAKVPGLYLGGNYRTGVAFGDCVQYGVDEASKIGVFLS 533          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|1109178672|gb|APF46090.1| (plastid protoporphyrinogen oxidase, partial [Euglena stellata])

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 282/495 (56.97%), Postives = 360/495 (72.73%), Query Frame = 0
Query:  183 ETDVLVVGSGISGSTTAFYL--NKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWK--------EKLYALPGGL-GDIPFFNLLSIPGRIRAGLGALGFIRGPPKDK-EESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELG--GRGILDGALLRIQEIQRTKP--PVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFRE--------PLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKA 653
            E D LVVGSGISGS TAF+L  N+     LLTE  PVVGGNVISK++  F+WEEGPNSFQPT  +M+   ++G++DELVLADASLPRFVYW+          L+ALP  L GD+  FNLL+IPG++RA  GA+GFI  PP    EES++EFVTRHLG ETFER+IDPFVSGVYAGDP +L+M+AALKK+ RLE LG  G G++ GA+ R +E+ + K   P  P  P ++GGQLGSFK+GLQ++P AVAKALG ++V+ S  L ++        G+ A F TP G K ++ + + +TAP  V  K+   LVP AA LA +Y PPVASVT+AY K  F+E        PL GFG+L+PRSM +R+LGTIW+SSLFPGR P  + +LL+YIGG++D GIA+++ ++IVK+VD D  K+LLK DAP  K+LG R+W TAIPQY +GHLDIL ++E    K PGLFLGGNYRTGVAFGDCV YG++EA R+ +YL + A
Sbjct:   12 EVDALVVGSGISGSCTAFHLLRNQKVSSLLLTETNPVVGGNVISKTDGEFIWEEGPNSFQPTATIMRTVYELGISDELVLADASLPRFVYWEGRGAGQKLANLHALPTNLPGDLFDFNLLTIPGKLRAAFGAVGFIAPPPPPPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDQLAMRAALKKIHRLEGLGDFGPGLVSGAVSRFKELAKEKKENPSDPAWPTFRGGQLGSFKKGLQTLPNAVAKALGPDRVKTSWTLTALSR---DGSGFLATFDTPDGPKVVRAKTVTVTAPTRVTSKVCSDLVPAAADLARIYSPPVASVTMAYRKEWFKELPGAQPGKPLVGFGHLLPRSMGVRSLGTIWTSSLFPGRTPEGWELLLTYIGGSRDKGIADMTEEEIVKQVDADNHKILLKDDAPMGKLLGCRVWRTAIPQYCRGHLDILDALEKDEAKVPGLFLGGNYRTGVAFGDCVQYGLDEASRMAAYLKSAA 503          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|1109178688|gb|APF46098.1| (plastid protoporphyrinogen oxidase, partial [Phacus inflexus])

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 290/488 (59.43%), Postives = 359/488 (73.57%), Query Frame = 0
Query:  190 GSGISGSTTAFYLNK-AGVKCLL-TEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWK--------EKLYALPGGL-GDIPFFNLLSIPGRIRAGLGALGFIRGPPKDK-EESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELG--GRGILDGALLRIQEIQRTKP--PVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFRE--------PLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKA 653
            GSGISGS  A +L K  GVK LL TEA PVVGGNVISK++  F+WEEGPNSFQPT  +M+   ++GL DELVLAD SLPRFV+W+          L+ALP  L GD+  F+LL+IPG+IRA  GALGFI  PP    EE+V+EFVTRHLG ETFER+IDPFVSGVYAGDP +L+M+AALKK+ RLE LG  G G++ GA+ R +E+ + K   PV P+ P YKGGQLGSF+RGLQ++P AVAK LG E+V+ S  L S+    G    + A F TP+G K +  + +A+TAP  V  K+  PLVP AA LA VY PPVASVT+AY K  F+E        PL GFG+L+PR M +R+LGTIWSSSLFPGRAP ++ +LL+YIGGA+D GI E+S  +IVK+VD D  K+LLK DAPA K+LG+R+W TAIPQY +GHLDI+A++E    K PGLFLGGNYRTGVAFGDCV YG++EA ++ +YLA  A
Sbjct:   55 GSGISGSCAAHHLFKNQGVKSLLVTEANPVVGGNVISKTDGEFIWEEGPNSFQPTPAIMRTVYELGLVDELVLADGSLPRFVFWEGGGAGQKLANLHALPTNLPGDLLSFDLLTIPGKIRAAFGALGFIAPPPPAPYEENVREFVTRHLGDETFERVIDPFVSGVYAGDPDQLAMRAALKKIHRLEGLGSLGPGLVSGAIARFKELAQEKKDNPVDPKWPTYKGGQLGSFRRGLQTLPNAVAKELGPERVKTSWTLSSLSRDGGR---FLATFDTPEGIKTVSARTVAVTAPTRVTSKVCAPLVPAAADLAKVYSPPVASVTMAYRKEWFKELPGAQPGKPLVGFGHLLPRRMGVRSLGTIWSSSLFPGRAPDEWELLLTYIGGARDKGIGEMSEAEIVKQVDADNHKILLKPDAPAGKLLGIRVWKTAIPQYCRGHLDIMAALERDEAKVPGLFLGGNYRTGVAFGDCVQYGIDEAAKMGAYLAKAA 539          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|1109178686|gb|APF46097.1| (plastid protoporphyrinogen oxidase, partial [Monomorphina parapyrum])

HSP 1 Score: 536.569 bits (1381), Expect = 2.160e-180
Identity = 290/495 (58.59%), Postives = 359/495 (72.53%), Query Frame = 0
Query:  183 ETDVLVVGSGISGSTTAFYLNK-AGVK-CLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWK--------EKLYALPGGL-GDIPFFNLLSIPGRIRAGLGALGFIRGPPKDK-EESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELG--GRGILDGALLRIQEIQRTKP--PVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFRE--------PLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYLAAKA 653
            E D LVVGSGISGS TA  L K  GVK  LLTE+ PVVGGNVISK++  F WEEGPNSFQPT  +M+   ++GL +ELVLAD SLPRFVYWK          L+ALP  L GD+  FNLL+IPG+IRA  GALGFI  PP    EES++EFVTRHLG ETFER+IDPFVSGVYAGDP +L+M+AALKK+ RLE LG  G G++ GA+ R +E+ + K   P  P  P YKGGQLGSF+RGLQ++P AVAK LG E+V+LS  L +V        G+ A F TP+G K ++ + + +TAP  V  K+   +VP AA LA +Y PPVASVT+AY K  F+E        PL GFG+L+PRSM +R+LGTIWSSSLFPGRAP  + +LL+YIGGA+D GI E++ ++IVK+VD D  ++LLK+DAPA K+LG R+W  AIPQY +GHLDIL ++E    K PGL+LGGNYRTGVAFGDCV YG +EA R+ ++L A A
Sbjct:   67 EVDALVVGSGISGSCTAHNLLKNQGVKNLLLTESNPVVGGNVISKTDGEFTWEEGPNSFQPTPAIMRTVYELGLVNELVLADGSLPRFVYWKGGGAGDKLANLHALPTNLPGDLLDFNLLTIPGKIRAAFGALGFIAPPPPAPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDQLAMRAALKKIHRLEGLGDLGPGLVSGAINRFKELAKDKKENPADPAWPTYKGGQLGSFRRGLQTLPNAVAKELGPERVKLSWILTNVSR---DGTGFLATFDTPEGIKTVRAKTVTVTAPTRVTSKVCADVVPAAAGLAKIYSPPVASVTMAYRKEWFKELPGAQPGKPLVGFGHLLPRSMGVRSLGTIWSSSLFPGRAPEGWELLLTYIGGARDRGIGEMTEEEIVKQVDEDNHRILLKADAPAGKLLGCRVWKQAIPQYCRGHLDILEALERDEAKVPGLYLGGNYRTGVAFGDCVQYGFDEALRMGAFLKASA 558          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|1109178676|gb|APF46092.1| (plastid protoporphyrinogen oxidase, partial [Euglenaformis proxima])

HSP 1 Score: 535.413 bits (1378), Expect = 3.591e-180
Identity = 279/491 (56.82%), Postives = 358/491 (72.91%), Query Frame = 0
Query:  183 ETDVLVVGSGISGSTTAFYL--NKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWK--------EKLYALPGGL-GDIPFFNLLSIPGRIRAGLGALGFIRGPPK-DKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELG--GRGILDGALLRIQEIQRTKP--PVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFRE--------PLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYL 649
            E D LV+GSGISGS TA +L  N+     L+ E  P+VGGNVIS+++  F WEEGPNSFQPT  +M+ T ++GL DELVLAD SLPRFVYW+          L+ALP  L GD+  FNL+++PG++RA  GALGFI  PP    EES++EFVTRHLG ETFER+IDPFVSGVYAGDP  L+M+AALKK+ RLE LG  G G++ GA+ R +E+ + K   P  P  P YKGGQLGSF++GLQ++P AVA  LG ++V+ S  L S+ +  G +  + A F TP+G K ++ +++A+TAP  VV K+   LVP AA L  VY PPVASVT+AYPK +F+E        PL GFG+L+PRSMK+R+LGTIWSSSLFPGRAP  + +LL+YIGGA+D GIA +S ++IV +VD D  K+LLK DAP  K+LG R+W TAIPQY +GHLDIL ++E    + PGL+LGGNYRTGVAFGDCV YG++EA ++ +YL
Sbjct:   44 EVDALVIGSGISGSCTAHHLYKNQGMTNILMAERNPIVGGNVISRTDGEFTWEEGPNSFQPTPAIMRTTYELGLNDELVLADGSLPRFVYWEGAGAGEKLANLHALPTNLPGDLLDFNLITLPGKVRAAFGALGFIAPPPPLPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDALAMRAALKKIHRLEGLGDFGPGLVSGAINRFKELAQEKKDNPPDPAWPTYKGGQLGSFRKGLQTLPNAVATELGPDRVKTSWALTSLSQ-DGSR--FLATFDTPEGVKTVRARSVAVTAPTRVVSKVCVDLVPAAAALDQVYAPPVASVTMAYPKESFKELPGAQPGKPLVGFGHLLPRSMKVRSLGTIWSSSLFPGRAPEGWELLLTYIGGARDRGIATMSEEEIVNQVDADNHKILLKPDAPPGKLLGCRVWQTAIPQYCRGHLDILEALEKDEAQVPGLYLGGNYRTGVAFGDCVQYGLDEAAKVAAYL 531          
BLAST of EWM26493.1 vs. NCBI_GenBank
Match: gi|1109178694|gb|APF46101.1| (plastid protoporphyrinogen oxidase, partial [Trachelomonas volvocina])

HSP 1 Score: 535.413 bits (1378), Expect = 8.000e-180
Identity = 285/491 (58.04%), Postives = 354/491 (72.10%), Query Frame = 0
Query:  183 ETDVLVVGSGISGSTTAFYL--NKAGVKCLLTEAKPVVGGNVISKSESGFLWEEGPNSFQPTYPLMQATVDMGLADELVLADASLPRFVYWK--------EKLYALPGGL-GDIPFFNLLSIPGRIRAGLGALGFIRGPPKDK-EESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELG--GRGILDGALLRIQEIQRTK--PPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKLLRPLVPEAARLADVYYPPVASVTLAYPKTAFRE--------PLRGFGNLIPRSMKIRTLGTIWSSSLFPGRAPPDYNMLLSYIGGAQDPGIAELSSQQIVKEVDRDIKKVLLKSDAPAPKILGVRLWPTAIPQYNKGHLDILASVEAGVKKHPGLFLGGNYRTGVAFGDCVTYGMEEAGRIQSYL 649
            E D LVVGSGISGS  AF L  N+     LLTE  PVVGGNVISK++  F+WEEGPNSFQPT  +M+   ++GL +ELVLAD SLPRFVYW+          L+ALP  L GD+  FNLL+IPG+IRA  GALGFI  PP    EES++EFVTRHLG ETFER+IDPFVSGVYAGDP +L+M+AALKK+ RLE LG  G G++ GA+ R +EI + K   P  P+ P  KGGQLGSF++GLQ++P AVAK LG E+V+ S  L  +         + A F TP G+K ++ + +A+TAP  V  K+   LVP AA L  +Y PPVASVT+AY K  F+E        PL GFG+L+PRSM +R+LGTIWSSSLFPGRAP  + +LL+YIGGA+D GI E+S ++IVK+VD D  ++LLKSDAPA K+LG R+W TAIPQY +GHLDIL +VE    K PGLFLGGNYRTGVAFGDCV YG++EA ++ ++L
Sbjct:   76 EVDALVVGSGISGSCAAFNLFRNQGIKNILLTERNPVVGGNVISKTDGEFVWEEGPNSFQPTPAIMRTVYELGLTNELVLADGSLPRFVYWEGRGAGDKLANLHALPTNLPGDLLDFNLLTIPGKIRAAFGALGFIAPPPPPPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDQLAMRAALKKIHRLEGLGDLGPGLVSGAINRFKEIAKEKRENPADPKWPTSKGGQLGSFRKGLQTLPNAVAKELGPERVKTSWTLSRLTRDGT---SFLATFDTPDGQKTVRARTVAVTAPTRVTSKVCAELVPAAAELDKIYSPPVASVTMAYRKEWFKELPGAQPGKPLVGFGHLLPRSMGVRSLGTIWSSSLFPGRAPEGWELLLTYIGGARDKGIGEMSEEEIVKQVDADNHRILLKSDAPAGKLLGCRVWKTAIPQYCRGHLDILEAVERDEAKVPGLFLGGNYRTGVAFGDCVQYGIDEAAKMGAFL 563          
The following BLAST results are available for this feature:
BLAST of EWM26493.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108547|gb|EWM26493.1|0.000e+0100.00protoporphyrinogen oxidase [Nannochloropsis gadita... [more]
gi|553188173|ref|XP_005854747.1|0.000e+099.03protoporphyrinogen IX oxidase, partial [Nannochlor... [more]
gi|298709811|emb|CBJ31610.1|0.000e+061.55protoporphyrinogen oxidase, putative chloroplast p... [more]
gi|546323893|ref|XP_005718212.1|0.000e+057.68unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|1109178674|gb|APF46091.1|0.000e+058.74plastid protoporphyrinogen oxidase, partial [Eugle... [more]
gi|1109178672|gb|APF46090.1|0.000e+056.97plastid protoporphyrinogen oxidase, partial [Eugle... [more]
gi|1109178688|gb|APF46098.1|0.000e+059.43plastid protoporphyrinogen oxidase, partial [Phacu... [more]
gi|1109178686|gb|APF46097.1|2.160e-18058.59plastid protoporphyrinogen oxidase, partial [Monom... [more]
gi|1109178676|gb|APF46092.1|3.591e-18056.82plastid protoporphyrinogen oxidase, partial [Eugle... [more]
gi|1109178694|gb|APF46101.1|8.000e-18058.04plastid protoporphyrinogen oxidase, partial [Trach... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4191rna4191Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications