EWM26509.1, cds4165 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|585108576|gb|EWM26509.1| (l-ascorbate peroxidase [Nannochloropsis gaditana]) HSP 1 Score: 439.499 bits (1129), Expect = 5.050e-156 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 1 MARMKQHQLRHHHVLRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
MARMKQHQLRHHHVLRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR
Sbjct: 1 MARMKQHQLRHHHVLRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|553183113|ref|XP_005853842.1| (hypothetical protein NGA_0439800, partial [Nannochloropsis gaditana CCMP526] >gi|422295222|gb|EKU22521.1| hypothetical protein NGA_0439800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 183.341 bits (464), Expect = 1.371e-56 Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0
Query: 46 MQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAIND 137
MQ RKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAIND
Sbjct: 1 MQARKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAIND 92
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|299116878|emb|CBN74988.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 146.362 bits (368), Expect = 1.275e-38 Identity = 74/145 (51.03%), Postives = 104/145 (71.72%), Query Frame = 0
Query: 72 AVLSSF-FALSLSSTPPA-RASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
+V +SF L+L+ +P A +ASV F+ +RYGDKELKIATVNKL+Q++RN++ D LA ++LAI D +G+DA+T GGPDGS+ E+DR+ LKPA++ K+K+ +Q TNE+T DV + GA AI + GGP + VQLGR
Sbjct: 70 SVAASFGLGLALAVSPEAAQASVNFETERYGDKELKIATVNKLRQQIRNSLLEDPKLAPEMLKLAIADALGFDASTQTGGPDGSVVLELDREVAKSLKPAVDNAFKIKKNLQRTNEMTLADVISMGGAEAIHACGGPPMLVQLGR 214
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|873220454|emb|CEM35639.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 135.191 bits (339), Expect = 3.920e-35 Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0
Query: 88 ARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
A+A V FD RYGDKELKIATVNKLKQ + AI LA VRLAI++ + Y AAT EGG DGSI E+D+ +NA ++ A+E L +++++I+ TNEVTF D+ ++AGA AIE GGPR QLGR
Sbjct: 3 AQAVVQFDRGRYGDKELKIATVNKLKQTVGLAITEKPHLAGQLVRLAISNALSYVAATGEGGLDGSIREEVDQPENADVREAVELLERIRKDIKRTNEVTFADLLSYAGAEAIELVGGPRFSPQLGR 129
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|545710284|ref|XP_005707450.1| (ascorbate peroxidase [Galdieria sulphuraria] >gi|452823924|gb|EME30930.1| ascorbate peroxidase [Galdieria sulphuraria]) HSP 1 Score: 126.716 bits (317), Expect = 4.612e-31 Identity = 68/167 (40.72%), Postives = 102/167 (61.08%), Query Frame = 0
Query: 52 RVFMNQASDDCDRRSLLSAGAVLSS---FFALSLSSTP-PARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
R++MN + RR+ LS V +S SL+ P A V FD DRYGDKEL I+T+N+LKQ LRN ++ +L L +++LA++D + Y T +GG +GS+ FEM R NA L ++ ++ QS ++V +GD AFAG+VA++ G PR+ +Q+GR
Sbjct: 60 RIWMNH--NKVSRRTFLSKALVYTSVGGLLTTSLTKFPLYCDAEVFFDIDRYGDKELTISTINRLKQTLRNTLSKNLDLLPQYIQLALHDALSYSKQTKKGGLNGSLRFEMQRPGNAFLSSCYQS---IEEAHQSYSDVGYGDYIAFAGSVALDIVGAPRVKLQVGR 221
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|551657576|ref|XP_005831559.1| (hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712] >gi|428175691|gb|EKX44579.1| hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712]) HSP 1 Score: 122.094 bits (305), Expect = 2.484e-29 Identity = 67/151 (44.37%), Postives = 91/151 (60.26%), Query Frame = 0
Query: 64 RRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
RR+ L + L L+L+ A A V FD +RYGDKELK++T+NK+KQ+ R L V RLA+ D + +DA T E GPDGS+ + + LK A E + ++K E+ ++T D+ AFAGAVAIE+TGGPR VQLGR
Sbjct: 59 RRTFLKSALTL----PLTLAVGQRAGAEVFFDTERYGDKELKVSTINKVKQQFRALYEKKPELLVPLFRLAMEDALSFDAGTRENGPDGSVLQRVGGPGSEYLKEAAEEVRRIKSELNRQTQLTSADIIAFAGAVAIEATGGPRTVVQLGR 205
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|544209916|ref|XP_005535360.1| (cytosolic ascorbate hydrogen peroxidase [Cyanidioschyzon merolae strain 10D] >gi|449015672|dbj|BAM79074.1| cytosolic ascorbate hydrogen peroxidase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 106.301 bits (264), Expect = 2.710e-23 Identity = 63/159 (39.62%), Postives = 92/159 (57.86%), Query Frame = 0
Query: 68 LSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQN------------AGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
LS G +L+ L P A A V FD +RYGDKE++++T+N+LKQ LRN ++ L FVRLA+ D +D +T GG + SI + + + Q +GL+ AL+ L ++ I+ EV++ D A+AG VA+E TGGPR+ VQ GR
Sbjct: 92 LSTGCLLAQTETLRDGQLPIAHAFVDFDVNRYGDKEIRVSTLNRLKQNLRNVLSQSPHLLEPFVRLALADAFTFDESTQVGGSNASIRYVLAKLQENGPRKTASAPGLSGLQEALKALEPIRPFIK---EVSWADTIAYAGVVAMELTGGPRLRVQNGR 247
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|1210530082|dbj|GAX11264.1| (hypothetical protein FisN_7Lh361 [Fistulifera solaris]) HSP 1 Score: 103.605 bits (257), Expect = 2.089e-22 Identity = 58/158 (36.71%), Postives = 93/158 (58.86%), Query Frame = 0
Query: 64 RRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEM-------DRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
RR+ ++ G + + +T A A V FDP YGD+EL+++ V+ +K+++R AI + SLA SF L++ DG+ Y A T++ GPDG+I F++ + L+ A +L+ ++ ++ N ++ D A AGA AIES GGP + VQLGR
Sbjct: 35 RRNWIN-GCIFGGGGVGAFIATTKANAQVFFDPAMYGDQELRVSAVDSVKERVRRAILENPSLAPSFYHLSLLDGLSYQAKTDKYGPDGTILFQVLGQKAPASDEYMTNLQKAAVVILETEKFLRQKNAISLPDAVAIAGAEAIESVGGPILVVQLGR 191
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|219124941|ref|XP_002182751.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406097|gb|EEC46038.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 103.605 bits (257), Expect = 2.270e-22 Identity = 73/207 (35.27%), Postives = 116/207 (56.04%), Query Frame = 0
Query: 15 LRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSA--GAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSI-----AFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
L+AA L +L+S+T AF+ P+ S+F R R+ M DRR +A G ++ + +++ TP A A V FDP YGD+EL++ V+ +++ +R AI + LA SF +LA+ DG+ +D+ T + GPDGSI + + D L+ A TL++ ++ ++ +T D A G+ +IES GGP + VQLGR
Sbjct: 5 LKAAPLAVLLSLTSTLAFQSPHPLSSFTS----ARNSRLAM-------DRRGFGNALVGTTAATLWNANIAVTP-ANAQVFFDPAMYGDQELRVGAVDSVRESVRRAILKNPQLAPSFYQLALLDGLSFDSKTQKYGPDGSILKVVLSTKADDAYTKNLQQACLTLIEAEKNLRKKVAITIADAIAIGGSQSIESIGGPVLAVQLGR 199
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|1072229407|gb|OEU14142.1| (putative ascorbate peroxidase, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 98.2117 bits (243), Expect = 1.366e-21 Identity = 52/130 (40.00%), Postives = 81/130 (62.31%), Query Frame = 0
Query: 90 ASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEM--DRDQNAG---LKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
A V FDP+ YGD+EL++ TV+ ++++ R AI +LA +F +LA+ DG+ ++A ++ GP+G + + + +D N LK A E L+ +R ++ V+ D A AGA AIES GGP + VQLGR
Sbjct: 75 AEVFFDPEMYGDQELRVGTVDTVRERTRRAILQTPALAPAFYQLALLDGLSFNAVNDKFGPNGGVIYAVLNSKDNNENLDKLKMAAEVLIDTERALRRKTAVSIADCVAIAGAEAIESIGGPVLTVQLGR 204 The following BLAST results are available for this feature:
BLAST of EWM26509.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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