EWM26513.1, cds4160 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|585108584|gb|EWM26513.1| (lysosomal alpha-mannosidase [Nannochloropsis gaditana]) HSP 1 Score: 213.001 bits (541), Expect = 4.470e-70 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query: 1 MGKPAILLRIALLLGSFSPGILASESTRTKATPPKPFSVGAHESWPPVYNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRWSSRC 102
MGKPAILLRIALLLGSFSPGILASESTRTKATPPKPFSVGAHESWPPVYNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRWSSRC
Sbjct: 1 MGKPAILLRIALLLGSFSPGILASESTRTKATPPKPFSVGAHESWPPVYNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRWSSRC 102
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|1052200804|ref|XP_017702115.1| (PREDICTED: alpha-mannosidase At3g26720-like [Phoenix dactylifera]) HSP 1 Score: 75.8702 bits (185), Expect = 1.542e-15 Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 45 WPPV------YNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQA 92
W PV YN T R D KLNVHLV HTHDDVGWLKT+DQYY+GSNNSIQ
Sbjct: 22 WSPVGSKYIAYNTTQRIVPD-KLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQG 74
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|703097120|ref|XP_010096029.1| (Lysosomal alpha-mannosidase [Morus notabilis] >gi|587873659|gb|EXB62835.1| Lysosomal alpha-mannosidase [Morus notabilis]) HSP 1 Score: 77.7962 bits (190), Expect = 4.570e-15 Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query: 39 VGAHESWPPVYNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRW 98
VG ES VYN + D KLNVHLV H+HDDVGWLKT+DQYY+GSNNSIQA RW
Sbjct: 20 VGVGESKYMVYNTSQGIVAD-KLNVHLVAHSHDDVGWLKTVDQYYVGSNNSIQAF-FQRW 77
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|1208512663|gb|OWM71389.1| (hypothetical protein CDL15_Pgr005576 [Punica granatum]) HSP 1 Score: 78.5666 bits (192), Expect = 6.407e-15 Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 0
Query: 48 VYNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRW 98
VYN TS D +KLNVHLV HTHDDVGWLKT+DQYY+GSNNSIQA RW
Sbjct: 24 VYN-TSAGIDPNKLNVHLVPHTHDDVGWLKTVDQYYVGSNNSIQAF-FQRW 72
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|672134764|ref|XP_008791035.1| (PREDICTED: alpha-mannosidase At3g26720 [Phoenix dactylifera]) HSP 1 Score: 78.1814 bits (191), Expect = 1.059e-14 Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 45 WPPV------YNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQA 92
W PV YN T R D KLNVHLV HTHDDVGWLKT+DQYY+GSNNSIQ
Sbjct: 24 WAPVESEYIAYNTTQRIVPD-KLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQG 76
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|743813312|ref|XP_010929675.1| (PREDICTED: alpha-mannosidase At3g26720 [Elaeis guineensis]) HSP 1 Score: 77.7962 bits (190), Expect = 1.214e-14 Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 45 WPPV------YNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQA 92
W PV YN T R D KLNVHLV HTHDDVGWLKT+DQYY+GSNNSIQ
Sbjct: 24 WSPVESNYIAYNTTQRIVPD-KLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQG 76
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|763809408|gb|KJB76310.1| (hypothetical protein B456_012G082700 [Gossypium raimondii]) HSP 1 Score: 77.411 bits (189), Expect = 1.878e-14 Identity = 39/56 (69.64%), Postives = 42/56 (75.00%), Query Frame = 0
Query: 43 ESWPPVYNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRW 98
ES VYN TS D K+NVHLV HTHDDVGWLKT+DQYY+GSNNSIQA RW
Sbjct: 19 ESKYMVYN-TSAGIDAGKINVHLVPHTHDDVGWLKTVDQYYVGSNNSIQAF-FQRW 72
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|703108513|ref|XP_010099053.1| (Lysosomal alpha-mannosidase [Morus notabilis] >gi|587887783|gb|EXB76513.1| Lysosomal alpha-mannosidase [Morus notabilis]) HSP 1 Score: 76.6406 bits (187), Expect = 3.358e-14 Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 49 YNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRW 98
YN TS D+ +NVHLV HTHDDVGWLKTIDQYY+GSNNSIQA RW
Sbjct: 28 YNTTSSVVADN-INVHLVAHTHDDVGWLKTIDQYYVGSNNSIQAF-FQRW 75
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|950979591|ref|XP_014501899.1| (PREDICTED: alpha-mannosidase-like isoform X2 [Vigna radiata var. radiata]) HSP 1 Score: 75.8702 bits (185), Expect = 5.471e-14 Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 49 YNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQAHSLSRW 98
YN T+ D K+NVHLV HTHDDVGWLKTIDQYY+GSNNSIQA RW
Sbjct: 29 YNTTTSI-DPGKINVHLVPHTHDDVGWLKTIDQYYVGSNNSIQAF-FQRW 76
BLAST of EWM26513.1 vs. NCBI_GenBank
Match: gi|1204906396|ref|XP_021285523.1| (probable alpha-mannosidase At5g13980 [Herrania umbratica]) HSP 1 Score: 75.8702 bits (185), Expect = 5.921e-14 Identity = 37/50 (74.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 43 ESWPPVYNVTSRCCDDSKLNVHLVCHTHDDVGWLKTIDQYYLGSNNSIQA 92
ES VYN TS+ KLNVHLV HTHDDVGWLKTIDQYY+GSNNSIQ
Sbjct: 20 ESKYMVYNTTSKIVP-GKLNVHLVAHTHDDVGWLKTIDQYYVGSNNSIQG 68 The following BLAST results are available for this feature:
BLAST of EWM26513.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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