EWM26529.1, cds4150 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|585108607|gb|EWM26529.1| (cullin protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 308.531 bits (789), Expect = 2.336e-106 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
Query: 1 MASAPPPNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDRSSRSRCTTWSNRTWCRRCWL 148
MASAPPPNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDRSSRSRCTTWSNRTWCRRCWL
Sbjct: 1 MASAPPPNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDRSSRSRCTTWSNRTWCRRCWL 148
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|676378097|ref|XP_009032327.1| (hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens] >gi|323456805|gb|EGB12671.1| hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens]) HSP 1 Score: 178.333 bits (451), Expect = 1.500e-49 Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 0
Query: 7 PNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
P I +EEGW EI KAI LE +LN G + +R LF P+EYV YT CYNMCTQR+P+NWSE LYQ+H ETI DYLT+TVLP+LR+ H ++LL E+ +RW NHKIMN+WMR FFMYLDR
Sbjct: 4 PKIIALEEGWNNEIKAKAIDVLEEMLNNGFDQKSQR-LFAPKEYVQTYTTCYNMCTQRSPYNWSEQLYQRHGETICDYLTKTVLPALRHQHNDFLLTELTKRWANHKIMNKWMRLFFMYLDR 124
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|298711209|emb|CBJ32430.1| (CULlin protein 1 [Ectocarpus siliculosus]) HSP 1 Score: 150.984 bits (380), Expect = 7.605e-40 Identity = 67/119 (56.30%), Postives = 87/119 (73.11%), Query Frame = 0
Query: 10 ITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
I++E+GW I P AI LE LN G D++ LF P++++ YT CY+MCTQR+P+NWSE LY +H ETIS YL+ TV+ +LR H E+LL E+ RRW NHKIMN+WM+KFF YLDR
Sbjct: 9 ISLEDGWCNNIKPNAINVLEDHLNRGF-DKRTSQLFTPKDFMSTYTTCYDMCTQRSPYNWSEQLYDRHGETISQYLSGTVVNALREQHGEFLLKELVRRWSNHKIMNQWMQKFFQYLDR 126
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|219124703|ref|XP_002182637.1| (CULlin protein 1 [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405983|gb|EEC45924.1| CULlin protein 1 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 148.673 bits (374), Expect = 9.390e-39 Identity = 68/122 (55.74%), Postives = 89/122 (72.95%), Query Frame = 0
Query: 10 ITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKE---YLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
I +EEGW EI KAI LE +LN GL+ + ++FGPREYV IYT CY+MCTQR+P+NWS LYQ+H ETI YL TV+P+LR+ + LL E++ RW +H+IMN+W++KFF YLDR
Sbjct: 9 IPLEEGWNDEIKAKAIDKLEAMLNGGLKSGET-NMFGPREYVQIYTTCYDMCTQRSPYNWSRELYQRHGETIERYLASTVIPALRDKTGQGGTTLLTELQHRWGDHQIMNKWLKKFFTYLDR 129
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|1173949084|gb|OQR97158.1| (CULlin protein 1 [Achlya hypogyna]) HSP 1 Score: 147.902 bits (372), Expect = 1.652e-38 Identity = 70/128 (54.69%), Postives = 94/128 (73.44%), Query Frame = 0
Query: 1 MASAPPPNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
MAS P I +E+GW+++I PK I L IL++G D+ + F P++Y+ IYTICY+MCTQR P+NWS LY +H ET ++YL +VLP L+N H E+LL E+ RRW+NHK+MN+WM KFFMYLDR
Sbjct: 1 MASKPL---IELEQGWKEQIKPKGIDILLNILDKGF-DKVQVCPFPPQQYMPIYTICYDMCTQRTPYNWSAQLYTRHGETFTEYLRSSVLPELQNQHDEFLLNELHRRWQNHKLMNKWMAKFFMYLDR 124
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|1072228904|gb|OEU13639.1| (cullin-like protein 1 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 147.132 bits (370), Expect = 2.707e-38 Identity = 68/122 (55.74%), Postives = 87/122 (71.31%), Query Frame = 0
Query: 10 ITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKE---YLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
I ++EGW+ EI KAI LE +LN L +FGP+EYV IYT CY+MCTQR+P+NWS LYQ+H ETI YLT VLP+LR+ + LL E+K RW+NH+IMN+W++KFF YLDR
Sbjct: 12 IPLDEGWDDEIKAKAIDRLEGLLNGDLTG----SIFGPKEYVQIYTTCYDMCTQRSPYNWSRELYQRHGETIERYLTTNVLPALRDKTSQGGTILLSELKHRWQNHQIMNKWLKKFFTYLDR 129
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|1210511905|dbj|GAX29145.1| (cullin 1 [Fistulifera solaris]) HSP 1 Score: 147.132 bits (370), Expect = 2.724e-38 Identity = 71/131 (54.20%), Postives = 95/131 (72.52%), Query Frame = 0
Query: 1 MASAPPPNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKE---YLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
MA+A I +EEGW +EI KA+ L+ ILNE +Q Q +LFGP+EYV IYT CY+MCTQR+P+NWS LYQ+H ETI YL VLP+L++ ++ LL E++ RW+NH+IMN+W++KFF YLDR
Sbjct: 1 MANAKV---IPLEEGWNEEIKAKALDKLQNILNEDMQTGQT-NLFGPKEYVQIYTTCYDMCTQRSPYNWSRELYQRHGETIEQYLNDYVLPALKDKPRQGPNILLTELQHRWKNHQIMNKWLKKFFTYLDR 127
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|669138794|ref|XP_008604965.1| (hypothetical protein SDRG_01226 [Saprolegnia diclina VS20] >gi|530743009|gb|EQC41251.1| hypothetical protein SDRG_01226 [Saprolegnia diclina VS20]) HSP 1 Score: 146.362 bits (368), Expect = 5.098e-38 Identity = 70/128 (54.69%), Postives = 92/128 (71.88%), Query Frame = 0
Query: 1 MASAPPPNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
MAS P I +E+GW+++I PK I L IL++G D+ F P+ Y+ IYTICY+MCTQR P+NWS LY +H ET ++YL + VLP L+N H E+LL E+ RRW+NHK+MN+WM KFFMYLDR
Sbjct: 1 MASKPL---IELEQGWKEQIKPKGIDILLDILDKGF-DKVAACPFPPQSYMPIYTICYDMCTQRTPYNWSAQLYTRHGETFTEYLRQKVLPELQNQHDEFLLNELHRRWQNHKLMNKWMSKFFMYLDR 124
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|635360684|emb|CCI10766.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 146.747 bits (369), Expect = 5.397e-38 Identity = 69/119 (57.98%), Postives = 88/119 (73.95%), Query Frame = 0
Query: 10 ITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
IT+EEGW+ EI PKAI L ILN G ++ F P+ ++ IYT CYNMCTQR+PFN+SE LY+ H ET +YL +TVLPSL+ H E+ L ++ +RWENHKIMN+WM KFFMYL+R
Sbjct: 2 ITLEEGWDHEIKPKAIDVLLDILNRGFENVHEGP-FPPKVFMPIYTTCYNMCTQRSPFNYSEQLYKLHGETFDEYLEKTVLPSLQQTHDEFFLPQLVKRWENHKIMNQWMYKFFMYLNR 119
BLAST of EWM26529.1 vs. NCBI_GenBank
Match: gi|813109733|ref|XP_012194667.1| (hypothetical protein SPRG_01077 [Saprolegnia parasitica CBS 223.65] >gi|641541251|gb|KDO35014.1| hypothetical protein SPRG_01077 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 145.591 bits (366), Expect = 9.405e-38 Identity = 70/128 (54.69%), Postives = 91/128 (71.09%), Query Frame = 0
Query: 1 MASAPPPNPITIEEGWEKEILPKAILPLERILNEGLQDRQRRDLFGPREYVHIYTICYNMCTQRNPFNWSEPLYQKHNETISDYLTRTVLPSLRNHHKEYLLVEVKRRWENHKIMNEWMRKFFMYLDR 128
MAS P I +E+GW+++I PK I L IL++G D+ F P+ Y+ IYTICY+MCTQR P+NWS LY +H ET ++YL VLP L+N H E+LL E+ RRW+NHK+MN+WM KFFMYLDR
Sbjct: 1 MASKPL---IELEQGWKEQIKPKGIDILLDILDKGF-DKVAACPFPPQSYMPIYTICYDMCTQRTPYNWSAQLYTRHGETFTEYLRTKVLPELQNQHDEFLLNELHRRWQNHKLMNKWMSKFFMYLDR 124 The following BLAST results are available for this feature:
BLAST of EWM26529.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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