EWM26544.1, cds4127 (CDS) Nannochloropsis gaditana

Overview
NameEWM26544.1
Unique Namecds4127
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:963137..964314 -
Alignment locationCM002462.1:962639..962884 -
Alignment locationCM002462.1:962172..962434 -
Alignment locationCM002462.1:961942..961994 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26544.1
Productatp-dependent metalloprotease
Orig transcript idgnl|cribi|Naga_100409g4.8440.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:963137..964314 -
CM002462.1supercontigCM002462.1:962639..962884 -
CM002462.1supercontigCM002462.1:962172..962434 -
CM002462.1supercontigCM002462.1:961942..961994 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|585108627|gb|EWM26544.1| (atp-dependent metalloprotease [Nannochloropsis gaditana])

HSP 1 Score: 1169.45 bits (3024), Expect = 0.000e+0
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0
Query:    1 MPRRRSLPAVKASIPSLCPVRTLASVSLLLFIGPSRAFTSPKPQISLPSCRGQSIAALTTRPSVHTFQQLGNTILSWPSLTTRRPSLTSLPSRASRIQRAATAGEDDSSSKSSGNTGQKNKGLRNNNRQRRPQIFIKKLQAFMGRFRTFIRSKMMLKVNGRPILKVTGWHASFALMLAFVLLSSVMRGSGRAGRGVSPAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLDKYNIPFYAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVKDFFRSRGTEAEKSWKRLVGNVMG 579
            MPRRRSLPAVKASIPSLCPVRTLASVSLLLFIGPSRAFTSPKPQISLPSCRGQSIAALTTRPSVHTFQQLGNTILSWPSLTTRRPSLTSLPSRASRIQRAATAGEDDSSSKSSGNTGQKNKGLRNNNRQRRPQIFIKKLQAFMGRFRTFIRSKMMLKVNGRPILKVTGWHASFALMLAFVLLSSVMRGSGRAGRGVSPAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLDKYNIPFYAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVKDFFRSRGTEAEKSWKRLVGNVMG
Sbjct:    1 MPRRRSLPAVKASIPSLCPVRTLASVSLLLFIGPSRAFTSPKPQISLPSCRGQSIAALTTRPSVHTFQQLGNTILSWPSLTTRRPSLTSLPSRASRIQRAATAGEDDSSSKSSGNTGQKNKGLRNNNRQRRPQIFIKKLQAFMGRFRTFIRSKMMLKVNGRPILKVTGWHASFALMLAFVLLSSVMRGSGRAGRGVSPAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLDKYNIPFYAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVKDFFRSRGTEAEKSWKRLVGNVMG 579          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|298712974|emb|CBJ26876.1| (cell division protein [Ectocarpus siliculosus])

HSP 1 Score: 364.385 bits (934), Expect = 1.270e-116
Identity = 201/389 (51.67%), Postives = 259/389 (66.58%), Query Frame = 0
Query:  200 EVPYSDFLKLVK-EHGPDVVSRLRIAPDRFDFL-MNGAPSFTRPVKAHPALLFFLDKYNIPFYAG-SPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVP---------------------FLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGG--SNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVKDFFRSR 562
            EVP S F++L++ + G DVV  +R++     F  MNG   +T P++    +   L    IPF A  SP   S + F ++ LL   +  +     +R  G M GS GK A    +D SLTF DVAG+D+AK +V+ELV M+K+P  +   GARLP G+L+ GPPGTGKTL+AR +A+EAGVP                     F Y +GS+FVEM+VGRGAAR+R LF KA K APCIIFLDELD LGK+RS   GG  +NDE EQTLNQLLACMDGLD+N +GV+VIAATNRY++LD+ALTRPGR DRIVRV++PD +GREAIL+VHTRK  LE    L  +A+LTPG++GA+LA + NEAAI A RR S  + + D   +V +F+ SR
Sbjct:   95 EVPMSTFMQLMEGKRGADVVESVRVSKTGTMFFKMNGKECYTLPLRVSKEVFKALCNSGIPFRASKSPPGLSFI-FPVVYLLAVYYFIV-----KRGQGSMVGSTGKLASSTELDTSLTFGDVAGVDQAKSQVQELVSMIKNPAPFIAAGARLPSGLLMVGPPGTGKTLMARVMAAEAGVPLPPPRRFRGVGGYLLIGRLPKFYYCSGSDFVEMYVGRGAARVRKLFVKAGKTAPCIIFLDELDALGKERS-GTGGRQTNDEAEQTLNQLLACMDGLDTNNNGVMVIAATNRYDVLDNALTRPGRFDRIVRVDVPDAAGREAILKVHTRKMKLEDVDVLRAVAELTPGLAGAELATIANEAAISAARRGSQQLLETDFLESVTNFYVSR 476          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|551575055|ref|XP_005773256.1| (ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516] >gi|485624854|gb|EOD20827.1| ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516])

HSP 1 Score: 359.762 bits (922), Expect = 1.911e-114
Identity = 196/345 (56.81%), Postives = 249/345 (72.17%), Query Frame = 0
Query:  200 EVPYSDFLKLV-KEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLDKYNIPFYAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDR-SLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRS 542
            EV Y+ F++L  +E G   +S LR++  R+ FL++GAP+FTRPV+A   L++FL K+ + F A   S+   +  LL  LL    ++ SM M R+M G   G+V K A    +    L+F+DVAGID AK EVRE+V MLKSP  Y   GARLP G+L+ GPPGTGKTLLAR +A++AGVPF Y +GS+FVE+FVGRGAAR+R LF++A   +PCI+F+DELD LGKQRS+RL GSNDEVEQTLNQ+LACMDGL      ++VI ATNRY+ILD ALTRPGR DR+VR+ELPD +GR   LRVHT+   L  D  L K+A  TP  SGA+LA L NEAAIR+VRR+
Sbjct:  128 EVSYAAFMQLAARESG--RISGLRLSLSRYGFLLDGAPAFTRPVRAPSDLVWFLHKHGVDFRAAPASAAGALLPLLFPLLWLGALY-SM-MRRQMGGQ--GNVSKRASAQLLAADGLSFEDVAGIDAAKEEVREVVAMLKSPATYAAAGARLPSGVLMCGPPGTGKTLLARVMAAQAGVPFFYCSGSDFVELFVGRGAARMRALFKEAAAVSPCIVFVDELDALGKQRSMRLAGSNDEVEQTLNQMLACMDGLGGESRDIVVIGATNRYDILDPALTRPGRFDRLVRIELPDEAGRLNTLRVHTKSLALAPDVSLRKVAAATPTFSGAELAALTNEAAIRSVRRA 466          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|551576904|ref|XP_005774095.1| (ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516] >gi|485625866|gb|EOD21666.1| ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516])

HSP 1 Score: 359.377 bits (921), Expect = 2.611e-114
Identity = 196/345 (56.81%), Postives = 249/345 (72.17%), Query Frame = 0
Query:  200 EVPYSDFLKLV-KEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLDKYNIPFYAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRS-LTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRS 542
            EV Y+ F++L  +E G   +S LR++  R+ FL++GAP+FTRPV+A   L++FL K+ + F A   S+   +  LL  LL    ++ SM M R+M G   G+V K A    +    L+F+DVAGID AK EVRE+V MLKSP  Y   GARLP G+L+ GPPGTGKTLLAR +A++AGVPF Y +GS+FVE+FVGRGAAR+R LF++A   +PCI+F+DELD LGKQRS+RL GSNDEVEQTLNQ+LACMDGL      ++VI ATNRY+ILD ALTRPGR DR+VR+ELPD +GR   LRVHT+   L  D  L K+A  TP  SGA+LA L NEAAIR+VRR+
Sbjct:  128 EVSYAAFMQLAARESG--RISGLRLSLSRYGFLLDGAPAFTRPVRAPSDLVWFLHKHGVDFRAAPASAAGALLPLLFPLLWLGALY-SM-MRRQMGGQ--GNVSKRASAQLLAADGLSFEDVAGIDAAKEEVREVVAMLKSPATYAAAGARLPSGVLMCGPPGTGKTLLARVMAAQAGVPFFYCSGSDFVELFVGRGAARMRALFKEAAAVSPCIVFVDELDALGKQRSMRLAGSNDEVEQTLNQMLACMDGLGGESRDIVVIGATNRYDILDPALTRPGRFDRLVRIELPDEAGRLNTLRVHTKSLALAPDVSLRKVAAATPTFSGAELAALTNEAAIRSVRRA 466          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|551545859|ref|XP_005760889.1| (ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516] >gi|485609478|gb|EOD08460.1| ATP-dependent metalloprotease FtsH [Emiliania huxleyi CCMP1516])

HSP 1 Score: 359.377 bits (921), Expect = 3.148e-114
Identity = 196/345 (56.81%), Postives = 249/345 (72.17%), Query Frame = 0
Query:  200 EVPYSDFLKLV-KEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLDKYNIPFYAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRS-LTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRS 542
            EV Y+ F++L  +E G   +S LR++  R+ FL++GAP+FTRPV+A   L++FL K+ + F A   S+   +  LL  LL    ++ SM M R+M G   G+V K A    +    L+F+DVAGID AK EVRE+V MLKSP  Y   GARLP G+L+ GPPGTGKTLLAR +A++AGVPF Y +GS+FVE+FVGRGAAR+R LF++A   +PCI+F+DELD LGKQRS+RL GSNDEVEQTLNQ+LACMDGL      ++VI ATNRY+ILD ALTRPGR DR+VR+ELPD +GR   LRVHT+   L  D  L K+A  TP  SGA+LA L NEAAIR+VRR+
Sbjct:  131 EVSYAAFMQLAARESG--RISGLRLSLSRYGFLLDGAPAFTRPVRAPSDLVWFLHKHGVDFRAAPASAAGALLPLLFPLLWLGALY-SM-MRRQMGGQ--GNVSKRASAQLLAADGLSFEDVAGIDAAKEEVREVVAMLKSPATYAAAGARLPSGVLMCGPPGTGKTLLARVMAAQAGVPFFYCSGSDFVELFVGRGAARMRALFKEAAAVSPCIVFVDELDALGKQRSMRLAGSNDEVEQTLNQMLACMDGLGGESRDIVVIGATNRYDILDPALTRPGRFDRLVRIELPDEAGRLNTLRVHTKSLALAPDVSLRKVAAATPTFSGAELAALTNEAAIRSVRRA 469          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|873228926|emb|CEM14539.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 325.479 bits (833), Expect = 1.638e-100
Identity = 197/425 (46.35%), Postives = 272/425 (64.00%), Query Frame = 0
Query:  156 LKVNGRPILKVTGWHASFALMLAF--VLLSSVMRGSGRAGRGVSPAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPV---KAHPALLFFLDKYNIPF-YAGSPSSKSLVAFLLLNLLPFAWIFLSMGMGRRMYGDMAGSVGKNAEENNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQR----SLRLGGS---NDEVEQTLNQLLACMDGLDSNQSG----VIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVKDFFRSRG 563
             K+ GRP      +  +FA  LA   VL+    R  G+ GR    A+  +S FL+L++      +  + I  D   +L  G  +F  P+        LL  L   N+PF +    + K L+  +L++  P   + L +   + M G     VG  A+ + + + ++F DVAG+DR+KREV+E+V+ML++PQ+Y  +GARLP+G+LL GPPGTGKT+LARALA+EAGVPFLY++GS+FVE+FVGRGA+R+R LF+KA+  APCIIF+DE+DTLGK+R       L G    N E  QTLN LLACMDGLD + S     ++VI ATNRY +LD+ALTRPGR DRIVR++LPD  GR AIL+V+ R+  L    DL +IA+LT G+SGA+L  +VNEAAIRAVR+    VGQ++ + AV      +G
Sbjct:   95 FKLAGRP------YVGAFARSLAMFGVLMLVRRRWVGKGGR---LADAGFSYFLRLLQSGK---LEEVVIREDSVLYLSEGR-AFRSPIIPTYVTGWLLSTLTMKNVPFQFKPHSAVKDLLTMILVSWAP---VLLLLAYMKNMLGKDE-DVGNEADTSRLGQ-ISFADVAGMDRSKREVQEIVEMLRTPQQYTTMGARLPRGVLLVGPPGTGKTMLARALAAEAGVPFLYASGSDFVEVFVGRGASRVRELFRKAKDDAPCIIFIDEIDTLGKRRPGETDWGLDGRESVNQEYTQTLNALLACMDGLDRDDSESPKPIVVIGATNRYGVLDEALTRPGRFDRIVRLDLPDNDGRLAILKVYARRLVLNARVDLRRIAELTKGLSGAELEAIVNEAAIRAVRKKKKQVGQMEFEEAVLSVISRKG 501          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|515367382|ref|WP_016870296.1| (cell division protein FtsH [Fischerella muscicola])

HSP 1 Score: 327.02 bits (837), Expect = 3.735e-100
Identity = 184/378 (48.68%), Postives = 246/378 (65.08%), Query Frame = 0
Query:  198 PAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLD--------KYNIPFYAGSPSSKSLVAFLLLNLLP-------FAWIFLSMGMGRRMYGDMAGSVGKNAEE--NNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSL--RLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVK 556
            P EVPYS+F++ V E G   V+R  ++P+R ++ +   P  T P +        +D        ++N+ F A  PS+   ++ LL  +LP       +AW+F      R   G  A +VGK+     +  D  +TF DVAGID AK E++E+VD LK   +Y +LGA++PKG+LL GPPGTGKTLLA+A+A EAGVPF   +GSEF+E+FVG GAAR+R LF++A++QAPCI+F+DELD LGK R+      G NDE EQTLNQLL  MDG D+N +GVI++AATNR E+LD AL RPGR DR + V+ PD+ GR+AIL VH R+  L  D DL KIA  TPG  GADLA LVNEAA+ A R++   V   D + A++
Sbjct:   45 PPEVPYSEFVEQV-EAGQ--VARAIVSPNRIEYQLKPKPGETEPPRIFATTPVAIDLDLPKILREHNVEFAAPPPSNTGWISTLLGWVLPPLIFFGIWAWLF-----SRAQGGPAALTVGKSKARIYSEGDTGVTFADVAGIDEAKAELQEIVDFLKHADRYARLGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFIELFVGVGAARVRDLFEQAKQQAPCIVFIDELDALGKSRAAGGPFVGGNDEREQTLNQLLTEMDGFDAN-TGVIILAATNRPEVLDPALRRPGRFDRQIAVDRPDKIGRKAILEVHARRVKLAADVDLDKIAARTPGFVGADLANLVNEAALLAARQNRDAVTMADFNEAIE 413          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|515371913|ref|WP_016872112.1| (cell division protein FtsH [Fischerella thermalis])

HSP 1 Score: 326.635 bits (836), Expect = 4.244e-100
Identity = 184/378 (48.68%), Postives = 245/378 (64.81%), Query Frame = 0
Query:  198 PAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLD--------KYNIPFYAGSPSSKSLVAFLLLNLLP-------FAWIFLSMGMGRRMYGDMAGSVGKNAEE--NNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSL--RLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVK 556
            P EVPYS+F++ V E G   V+R  ++P+R ++ +   P  T P +        +D        ++N+ F A  PS+   +  LL  +LP       +AW+F      R   G  A +VGK+     +  D  +TF DVAGID AK E++E+VD LK   +Y +LGA++PKG+LL GPPGTGKTLLA+A+A EAGVPF   +GSEF+E+FVG GAAR+R LF++A++QAPCI+F+DELD LGK R+      G NDE EQTLNQLL  MDG D+N +GVI++AATNR E+LD AL RPGR DR + V+ PD+ GR+AIL VH R+  L  D DL KIA  TPG  GADLA LVNEAA+ A R++   V   D + A++
Sbjct:   45 PPEVPYSEFVEQV-EAGQ--VARAIVSPNRIEYQLKPKPGETEPPRIFATTPVAIDLDLPKILREHNVEFAAPPPSNTGWIGTLLSWVLPPLIFFGIWAWLF-----NRAQGGPAALTVGKSKARIYSEGDTGVTFADVAGIDEAKAELQEIVDFLKHADRYARLGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFIELFVGVGAARVRDLFEQAKQQAPCIVFIDELDALGKSRAAGGPFVGGNDEREQTLNQLLTEMDGFDAN-TGVIILAATNRPEVLDPALRRPGRFDRQIVVDRPDKIGRKAILEVHARRVKLASDVDLDKIAARTPGFVGADLANLVNEAALLAARQNRDAVTMADFNEAIE 413          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|497442551|ref|WP_009756749.1| (cell division protein FtsH [Fischerella sp. JSC-11] >gi|353545537|gb|EHC14988.1| ATP-dependent metalloprotease FtsH [Fischerella sp. JSC-11])

HSP 1 Score: 326.635 bits (836), Expect = 4.335e-100
Identity = 184/378 (48.68%), Postives = 245/378 (64.81%), Query Frame = 0
Query:  198 PAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLD--------KYNIPFYAGSPSSKSLVAFLLLNLLP-------FAWIFLSMGMGRRMYGDMAGSVGKNAEE--NNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSL--RLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVK 556
            P EVPYS+F++ V E G   V+R  ++P+R ++ +   P  T P +        +D        ++N+ F A  PS+   +  LL  +LP       +AW+F      R   G  A +VGK+     +  D  +TF DVAGID AK E++E+VD LK   +Y +LGA++PKG+LL GPPGTGKTLLA+A+A EAGVPF   +GSEF+E+FVG GAAR+R LF++A++QAPCI+F+DELD LGK R+      G NDE EQTLNQLL  MDG D+N +GVI++AATNR E+LD AL RPGR DR + V+ PD+ GR+AIL VH R+  L  D DL KIA  TPG  GADLA LVNEAA+ A R++   V   D + A++
Sbjct:   45 PPEVPYSEFVEQV-EAGQ--VARAIVSPNRIEYQLKPKPGETEPPRIFATTPVAIDLDLPKILREHNVEFAAPPPSNTGWIGTLLSWVLPPLIFFGIWAWLF-----NRAQGGPAALTVGKSKARIYSEGDTGVTFADVAGIDEAKAELQEIVDFLKHADRYARLGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFIELFVGVGAARVRDLFEQAKQQAPCIVFIDELDALGKSRAAGGPFVGGNDEREQTLNQLLTEMDGFDAN-TGVIILAATNRPEVLDPALRRPGRFDRQIVVDRPDKIGRKAILEVHARRVKLASDVDLDKIAARTPGFVGADLANLVNEAALLAARQNRDAVTMADFNEAIE 413          
BLAST of EWM26544.1 vs. NCBI_GenBank
Match: gi|1121231689|ref|WP_073555537.1| (cell division protein FtsH [Fischerella major] >gi|1115250458|gb|OKH14987.1| cell division protein FtsH [Fischerella major NIES-592])

HSP 1 Score: 326.635 bits (836), Expect = 5.478e-100
Identity = 184/378 (48.68%), Postives = 246/378 (65.08%), Query Frame = 0
Query:  198 PAEVPYSDFLKLVKEHGPDVVSRLRIAPDRFDFLMNGAPSFTRPVKAHPALLFFLD--------KYNIPFYAGSPSSKSLVAFLLLNLLP-------FAWIFLSMGMGRRMYGDMAGSVGKNAEE--NNIDRSLTFDDVAGIDRAKREVRELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSL--RLGGSNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPGMSGADLAGLVNEAAIRAVRRSSPMVGQVDLDLAVK 556
            P EVPYS+F++ V E G   V+R  ++P+R ++ +   P  T P +        +D        ++N+ F A  PS+   ++ LL  +LP       +AW+F      R   G  A +VGK+     +  D  +TF DVAGID AK E++E+VD LK   +Y +LGA++PKG+LL GPPGTGKTLLA+A+A EAGVPF   +GSEF+E+FVG GAAR+R LF++A++QAPCI+F+DELD LGK R+      G NDE EQTLNQLL  MDG D+N +GVI++AATNR E+LD AL RPGR DR + V+ PD+ GR+AIL VH R+  L  D DL KIA  TPG  GADLA LVNEAA+ A R++   V   D + A++
Sbjct:   45 PPEVPYSEFVEQV-EAGQ--VARAIVSPNRIEYQLKPKPGETEPPRIFATTPVAIDLDLPKILREHNVEFAAPPPSNTGWISTLLGWVLPPLIFFGIWAWLF-----NRAQGGPAALTVGKSKARIYSEGDTGVTFADVAGIDEAKAELQEIVDFLKHADRYARLGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFIELFVGVGAARVRDLFEQAKQQAPCIVFIDELDALGKSRAAGGPFVGGNDEREQTLNQLLTEMDGFDAN-TGVIILAATNRPEVLDPALRRPGRFDRQIVVDRPDKIGRKAILEVHARRVKLAADVDLDKIAARTPGFVGADLANLVNEAALLAARQNRDAVTMADFNEAIE 413          
The following BLAST results are available for this feature:
BLAST of EWM26544.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108627|gb|EWM26544.1|0.000e+0100.00atp-dependent metalloprotease [Nannochloropsis gad... [more]
gi|298712974|emb|CBJ26876.1|1.270e-11651.67cell division protein [Ectocarpus siliculosus][more]
gi|551575055|ref|XP_005773256.1|1.911e-11456.81ATP-dependent metalloprotease FtsH [Emiliania huxl... [more]
gi|551576904|ref|XP_005774095.1|2.611e-11456.81ATP-dependent metalloprotease FtsH [Emiliania huxl... [more]
gi|551545859|ref|XP_005760889.1|3.148e-11456.81ATP-dependent metalloprotease FtsH [Emiliania huxl... [more]
gi|873228926|emb|CEM14539.1|1.638e-10046.35unnamed protein product [Vitrella brassicaformis C... [more]
gi|515367382|ref|WP_016870296.1|3.735e-10048.68cell division protein FtsH [Fischerella muscicola][more]
gi|515371913|ref|WP_016872112.1|4.244e-10048.68cell division protein FtsH [Fischerella thermalis][more]
gi|497442551|ref|WP_009756749.1|4.335e-10048.68cell division protein FtsH [Fischerella sp. JSC-11... [more]
gi|1121231689|ref|WP_073555537.1|5.478e-10048.68cell division protein FtsH [Fischerella major] >gi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4137rna4137Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications