EWM26564.1, cds4125 (CDS) Nannochloropsis gaditana

Overview
NameEWM26564.1
Unique Namecds4125
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:955673..955856 -
Alignment locationCM002462.1:955036..955397 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26564.1
Productputative methyltransferase wbscr22
Orig transcript idgnl|cribi|Naga_100084g1.1572.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:955673..955856 -
CM002462.1supercontigCM002462.1:955036..955397 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: INTERPRO
TermDefinition
IPR022238Unchr_MeTrfase_Williams-Beuren
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|585108649|gb|EWM26564.1| (putative methyltransferase wbscr22 [Nannochloropsis gaditana])

HSP 1 Score: 368.622 bits (945), Expect = 4.516e-129
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTSVGVTERERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTSVGVTERERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL
Sbjct:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTSVGVTERERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|299473609|emb|CBN78003.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 215.312 bits (547), Expect = 4.944e-67
Identity = 107/191 (56.02%), Postives = 133/191 (69.63%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQA----------LGREEGGRALTSVGVTERERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            MG GLPFR A FDG +S+SALQWLCY  +  Q A  RL+RFF+SLY  L+RG+RAALQFYP+++EQ +LI+  A R GF GGLV+DYPNS+KAKKYYLCLSFEH Y+ P A            + +GG          RER   RG+ K GK    K+R WVLAKK++QRR+G DVR+D+K+T RKRKD+ 
Sbjct:  102 MGTGLPFRPATFDGCISVSALQWLCYAQTSEQVAKTRLLRFFSSLYATLKRGSRAALQFYPDSTEQAVLISSCAARAGFTGGLVIDYPNSTKAKKYYLCLSFEHGYKTPAAKRAEPEGGAAAAKFDGG---------SRERRGHRGKPKKGK--VAKTRNWVLAKKDQQRRQGRDVRDDNKFTGRKRKDKF 281          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|397615007|gb|EJK63153.1| (hypothetical protein THAOC_16208 [Thalassiosira oceanica])

HSP 1 Score: 214.542 bits (545), Expect = 3.529e-66
Identity = 108/189 (57.14%), Postives = 133/189 (70.37%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEG---GRALTSVGVTERERVKPRGRKKGG-----KREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            MG GLPFR A FD  +SISALQWLCY +SK Q    RLMRFF+SLY VLRRGARA LQFYPE SE  +LI++ A +VGF GG+VVDYPNS+KAKK+YL LSFE  Y+ PQ L   EG     A T V V +R+   P+  K+GG     K++  K++EW+L KKE QR++G + R+D+KYT RKR  R 
Sbjct:  147 MGTGLPFRPATFDACISISALQWLCYSNSKDQIPKRRLMRFFSSLYKVLRRGARAVLQFYPETSEHAILISECAAKVGFAGGIVVDYPNSTKAKKHYLVLSFERVYKAPQGLTGAEGALLNEARTGVHVADRD---PKKSKRGGGKAPRKKKGTKTKEWILHKKETQRKRGKETRKDTKYTGRKRPMRF 332          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|219128098|ref|XP_002184259.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404490|gb|EEC44437.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 201.06 bits (510), Expect = 2.468e-61
Identity = 104/188 (55.32%), Postives = 133/188 (70.74%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQ--ALGREEGGRALTSVGVTE-----RERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            MG GLPFR A FD  +SISALQWLCY +S AQ+   RL RFF+SLYTVL+RG RA LQFYPE +EQ +LI++ AT+VGF GG+VVDYPNS+KAKK+YL LSF+ S   P+  ALG  E  +    V V E     + + +P  +KKG     +K++EW+L KK+ QR KG DVR D+KYTAR+R+ + 
Sbjct:  108 MGSGLPFRPATFDACISISALQWLCYSNSAAQNPRKRLTRFFSSLYTVLKRGGRAVLQFYPETAEQAVLISETATKVGFAGGVVVDYPNSAKAKKHYLVLSFDRSL-APRRGALGTAEQDQKQQHVTVGEALGSNKGKKQPPRKKKG-----IKTKEWILHKKDAQRTKGKDVRPDTKYTARRRRGKF 289          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|224003301|ref|XP_002291322.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973098|gb|EED91429.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 196.052 bits (497), Expect = 1.708e-59
Identity = 105/188 (55.85%), Postives = 132/188 (70.21%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTS------VGVTERE-RVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            MG GLPFR A FD  +SISALQWLCY +SK Q    RLMRFF+SLY VLRRGARA LQFYPE+SE  +LI++ A +VGF GG+VVDYPNS+KAKK+YL LSFE +Y+ P+ L   EG  AL +      V V +++ + + +G     K+   K++EW+L KKE QR+KG D R D+KYT RKR  R 
Sbjct:  101 MGTGLPFRPASFDACISISALQWLCYSNSKDQIPKRRLMRFFSSLYQVLRRGARAVLQFYPESSEHAILISECAAKVGFAGGIVVDYPNSTKAKKHYLVLSFERAYKAPEGLSGVEG--ALLNEDRKGGVRVGDKDPKKRGKGGPPKKKKGVGKTKEWILHKKETQRKKGKDTRTDTKYTGRKRPTRF 286          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|719742643|ref|XP_010210155.1| (PREDICTED: probable 18S rRNA (guanine-N(7))-methyltransferase, partial [Tinamus guttatus])

HSP 1 Score: 191.045 bits (484), Expect = 1.171e-58
Identity = 99/178 (55.62%), Postives = 124/178 (69.66%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTSVGVTERERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRK 178
            MGQG+PFR   FDG +SISA+QWLC  D K+ S   RL RFF++LY+ L RG+RA LQ YPENSEQ+ LIT  A R GF GG+VVDYPNS+KAKK++LCL    S  +P+ALG E     L     T  ER + R  K  GK  + KSR+W+L KKE++RR+G +VR D+KYT RKR+
Sbjct:   24 MGQGIPFRPGTFDGCISISAVQWLCNADKKSHSPPKRLYRFFSTLYSALARGSRAVLQLYPENSEQLELITAQAMRAGFTGGMVVDYPNSAKAKKFFLCLFVGASSTLPKALGTECADEELQQAKFTN-ERTRFRNVK--GKSVK-KSRDWILEKKERRRRQGKEVRGDTKYTGRKRR 197          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|697414348|gb|KGL75373.1| (putative methyltransferase WBSCR22, partial [Tinamus guttatus])

HSP 1 Score: 190.66 bits (483), Expect = 1.482e-58
Identity = 99/178 (55.62%), Postives = 124/178 (69.66%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTSVGVTERERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRK 178
            MGQG+PFR   FDG +SISA+QWLC  D K+ S   RL RFF++LY+ L RG+RA LQ YPENSEQ+ LIT  A R GF GG+VVDYPNS+KAKK++LCL    S  +P+ALG E     L     T  ER + R  K  GK  + KSR+W+L KKE++RR+G +VR D+KYT RKR+
Sbjct:   19 MGQGIPFRPGTFDGCISISAVQWLCNADKKSHSPPKRLYRFFSTLYSALARGSRAVLQLYPENSEQLELITAQAMRAGFTGGMVVDYPNSAKAKKFFLCLFVGASSTLPKALGTECADEELQQAKFTN-ERTRFRNVK--GKSVK-KSRDWILEKKERRRRQGKEVRGDTKYTGRKRR 192          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|1210516711|dbj|GAX24200.1| (methyltransferase-like protein 6 [Fistulifera solaris])

HSP 1 Score: 194.512 bits (493), Expect = 1.739e-58
Identity = 99/188 (52.66%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTSVGVTERERVKPRGRKKGG-------KREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            MG GLPFR A FD  +SISALQWLCY +S  Q+   RL RFF+SLYTVL+RG RA LQFYPE +EQ +LIT+ ATRVGF GG+VVDYPNS+KAKK+YL LSF+ +    +    ++G     S    E++ V   G  + G       K++ VK++EW++ KKE QR+KG  VR D+KYTAR+R  + 
Sbjct:  131 MGTGLPFRPATFDACISISALQWLCYSNSAQQNPRRRLTRFFSSLYTVLKRGGRAVLQFYPETAEQAVLITECATRVGFAGGVVVDYPNSAKAKKHYLVLSFDRNSEQKRKAALKDG----LSSAAEEQQSVLVTGASREGTKKAPIRKKKGVKTKEWIVHKKETQRKKGKAVRPDTKYTARRRPTKF 314          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|1020547269|ref|XP_016108893.1| (PREDICTED: probable 18S rRNA (guanine-N(7))-methyltransferase isoform X1 [Sinocyclocheilus grahami])

HSP 1 Score: 188.734 bits (478), Expect = 4.901e-58
Identity = 96/182 (52.75%), Postives = 123/182 (67.58%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGREEGGRALTSVGVTERERVKPRGRKKGGKREQV-KSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            MG+GLPFR   FDG +SISALQWLC  D K  S   RL RFF++LY+ L RGARA  Q YPENSEQ+ LIT  A + GF GG+VVD+PNSSKAKK++LCL    S  +P+ LG E   R +++    + +    R R    K + V KS++W++ KKE++RR+G DVR D+KYTAR RK R 
Sbjct:    1 MGEGLPFRPGMFDGCISISALQWLCNADKKTHSPPKRLYRFFSTLYSSLARGARAVFQIYPENSEQLELITAQAMKAGFTGGMVVDFPNSSKAKKFFLCLFAGVSGVLPKGLGSESTDRGVSN----QAQFTAQRSRFTNMKGKSVKKSKDWIMEKKERRRRQGKDVRADTKYTARHRKPRF 178          
BLAST of EWM26564.1 vs. NCBI_GenBank
Match: gi|696974710|ref|XP_009556975.1| (PREDICTED: Williams-Beuren syndrome chromosomal region 22 protein [Cuculus canorus])

HSP 1 Score: 191.045 bits (484), Expect = 5.152e-58
Identity = 99/183 (54.10%), Postives = 125/183 (68.31%), Query Frame = 0
Query:    1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGRE--EGGRALTSVGVTERERVKPRGRKKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
            +G G+PFRA  FDG +SISA+QWLC  D K+ S   RL RFF++LYT L RG+RA LQ YPENSEQ+ LIT  A R GF GG+VVDYPNS+KAKK++LCL    S  +P+ LG E  +G   L +    ER R     R   GK  + KSR+W+L KKE++RR+G +VR D+KYT RKR+ R 
Sbjct:   67 VGHGIPFRAGMFDGCISISAVQWLCNADKKSHSPPKRLYRFFSTLYTALARGSRAVLQLYPENSEQLELITAQAMRAGFTGGMVVDYPNSAKAKKFFLCLFVGTSGTLPKGLGTECADGEETLQAKFTNERTRF----RNAKGKSVK-KSRDWILEKKERRRRQGKEVRADTKYTGRKRRPRF 244          
The following BLAST results are available for this feature:
BLAST of EWM26564.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108649|gb|EWM26564.1|4.516e-129100.00putative methyltransferase wbscr22 [Nannochloropsi... [more]
gi|299473609|emb|CBN78003.1|4.944e-6756.02conserved unknown protein [Ectocarpus siliculosus][more]
gi|397615007|gb|EJK63153.1|3.529e-6657.14hypothetical protein THAOC_16208 [Thalassiosira oc... [more]
gi|219128098|ref|XP_002184259.1|2.468e-6155.32predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|224003301|ref|XP_002291322.1|1.708e-5955.85predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|719742643|ref|XP_010210155.1|1.171e-5855.62PREDICTED: probable 18S rRNA (guanine-N(7))-methyl... [more]
gi|697414348|gb|KGL75373.1|1.482e-5855.62putative methyltransferase WBSCR22, partial [Tinam... [more]
gi|1210516711|dbj|GAX24200.1|1.739e-5852.66methyltransferase-like protein 6 [Fistulifera sola... [more]
gi|1020547269|ref|XP_016108893.1|4.901e-5852.75PREDICTED: probable 18S rRNA (guanine-N(7))-methyl... [more]
gi|696974710|ref|XP_009556975.1|5.152e-5854.10PREDICTED: Williams-Beuren syndrome chromosomal re... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4135rna4135Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications