EWM26562.1, cds4120 (CDS) Nannochloropsis gaditana

Overview
NameEWM26562.1
Unique Namecds4120
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:942731..944015 -
Alignment locationCM002462.1:942453..942598 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26562.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100084g7.1570.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:942731..944015 -
CM002462.1supercontigCM002462.1:942453..942598 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|585108647|gb|EWM26562.1| (hypothetical protein Naga_100084g7 [Nannochloropsis gaditana])

HSP 1 Score: 966.452 bits (2497), Expect = 0.000e+0
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0
Query:    1 MPGTSTRRQNFDTGAGKEGGMGGSFTWGSTDQVLRPRTRLRTNGRFYVFVLLLLTSAHAFLPRTPKLTATRYLQASTPVSSKPSSSTTPVATDAAQYWPLLEELVSSCLVDDKAFSPTGSDASPYVRPRQRDVGASGEGMVAIGASLADTRLVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
            MPGTSTRRQNFDTGAGKEGGMGGSFTWGSTDQVLRPRTRLRTNGRFYVFVLLLLTSAHAFLPRTPKLTATRYLQASTPVSSKPSSSTTPVATDAAQYWPLLEELVSSCLVDDKAFSPTGSDASPYVRPRQRDVGASGEGMVAIGASLADTRLVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD
Sbjct:    1 MPGTSTRRQNFDTGAGKEGGMGGSFTWGSTDQVLRPRTRLRTNGRFYVFVLLLLTSAHAFLPRTPKLTATRYLQASTPVSSKPSSSTTPVATDAAQYWPLLEELVSSCLVDDKAFSPTGSDASPYVRPRQRDVGASGEGMVAIGASLADTRLVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|873239174|emb|CEL94590.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 137.117 bits (344), Expect = 7.135e-32
Identity = 105/353 (29.75%), Postives = 173/353 (49.01%), Query Frame = 0
Query:  137 GEGMVAIGASLADTR-----LVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRE--RVEKALGFTASPAVERVESGIAIVMALSITSA--LTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWT-------------PRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
            GE   A+  +LA+ R     +   LE +K+R   DG      +  W++  + +       L++Y +MR+     + L      AV+++  G+  V+ L  T A  L  L+ +P  D VR+  +  L+S+PF Y+++G++ P  L     +V  AL+ +  ERL  HEA HFLVGYL GLP+ SYS +  LN VEF   +     A       +D  + G   +P    P   ++ +  T             P  V+  E   R  VV+ AGV  EY+    AEGG  D+  + A+    DP +   E++ ++ WGV+++Y ++ + +  L AL+ +F  G S+V C++ +E 
Sbjct:  118 GEIWEALTEALAEERTKGEKVAKLLEALKLR---DG------VSLWDAESVLYRPTPLEQLKIYLKMRDVSNPARVLDIDGGSAVDKIALGLG-VLCLVATGAVFLGALNWIPN-DFVRYCVSLALISLPFTYMAVGIARPNDLFFFIAEVWRALSPKTAERLYYHEAAHFLVGYLLGLPIKSYSANSFLNRVEFYDDMDILTAADRPPESLRDRIQAG-FEVPEGDRPREADDDDEVTLRRELRSGERRPRPGTVVNLERAKRAIVVASAGVAGEYLYCESAEGGSADIKWIDAVLRRTDPPLKRDERQDYMRWGVVEAYLLLDKYKTTLDALVDSFRAGRSIVECVKAIED 458          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|219122870|ref|XP_002181760.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407036|gb|EEC46974.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 119.013 bits (297), Expect = 3.732e-25
Identity = 93/345 (26.96%), Postives = 152/345 (44.06%), Query Frame = 0
Query:  185 FGVSRNDLRVYARM---RERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEF------------AQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEE-------------------------------------LARLTVVSLAGVVSEYIAY----------GKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
            +G+S  DL +  R+   +  +   +  + +   +R    +  +M  S  SA+     LPGP+I+R+         PF ++  G++ PE L      V   L   Y++R+L+HEAGHFL+G+L GLPV  Y  +   NAV F            A  L F  ++ +A  V Q+S       L +   P   E     T RG  L EE                                     L +L+ +S+AGV SE +A+          G AEGG  DL+QL  ++  A+P++S+R++E  + + +  + + +R++  AL AL    ER  ++  C+  +E 
Sbjct:  112 WGISDGDLAIQTRLLNSKYSIMDVIELSGNRDADRASLSLLCLMVASTISAIIANQHLPGPEILRFMVVWLFCFSPFIFVGYGIATPEKLQAFLVSVQRELFPAYRQRMLQHEAGHFLMGHLLGLPVAGYQANAVKNAVNFYPLADTDRSFDLASQLGF-DKSLSARRVEQNSEALSADQLSAFDAPFFSE-----TGRGAWLVEERSVFRNAQNYTNNPFLKLASRNEPSNSWPFRGFDEATLDQLSAISVAGVCSEILAFVCIRLFLWAIGNAEGGVADLNQLRQIYRSAEPSISERDEENRIRFALGYTMSQLRRHLGALDALSKIMERDGTIAECVAAIEN 450          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|1072236039|gb|OEU20767.1| (hypothetical protein FRACYDRAFT_179918, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 97.4413 bits (241), Expect = 3.401e-19
Identity = 58/189 (30.69%), Postives = 100/189 (52.91%), Query Frame = 0
Query:  286 YKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETG--PAMLPSKSGPVSR-EEAERWTPRGV----LLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
            Y++R+++HEAGHFL+ +L G+P+  Y+ +   N+V+F                P +  + G   A +     P SR +E    T R      L+ +   +L VVS+AGV +E I++G AEGG  D+SQL  +FN A+P ++DRE+E  + + +  +   +R +   +  L    + G +V  C+  +E+
Sbjct:    7 YRQRMIQHEAGHFLLAHLLGIPIAGYTTNAVKNSVQF---------------YPLNDKDVGREKAEILGFDRPTSRVDEGHLLTRRDAQTTSLILKSNQKLCVVSVAGVCAEIISFGNAEGGIADISQLQQIFNSAEPELTDREKENRIRFAMGYTMTQLRIHLGCIDRLADVMDNGGTVAECVLAIER 180          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|1026029823|ref|XP_016561172.1| (PREDICTED: uncharacterized protein LOC107860360 isoform X2 [Capsicum annuum])

HSP 1 Score: 89.3521 bits (220), Expect = 2.899e-16
Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 0
Query:  283 NREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
            +++Y  R+++HEAGHFL+ YL G+    Y+++  L+A++                      + G   + + +  V  E  E     G +    L R + ++LAGV +EY+ +G AEGG +D++QL AL  L     + ++ +  + W VL +  ++R++EKA   L  A  +G+SVV C+  +E    +Y+ DD
Sbjct:  123 SQKYHNRVIQHEAGHFLIAYLLGILPKGYTLTS-LDALK----------------------KQGSLNIQAGTAFVDFEFTEE-VNSGKVTATMLNRFSCIALAGVATEYLLFGYAEGGLSDINQLDAL--LKSLGFTQKKADSQVRWAVLNTILILRRHEKARAKLAEAMTKGKSVVVCIDTIE----KYISDD 286          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|504987963|ref|WP_015175065.1| (hypothetical protein [Oscillatoria nigro-viridis] >gi|428239955|gb|AFZ05741.1| hypothetical protein Osc7112_1194 [Oscillatoria nigro-viridis PCC 7112])

HSP 1 Score: 88.1965 bits (217), Expect = 3.464e-16
Identity = 58/185 (31.35%), Postives = 93/185 (50.27%), Query Frame = 0
Query:  283 NREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
            ++E ++R+L HEAGHFLV YL G+PV SY+    LNA E     +F Q   A   V  +  +    +                   G L  + L +   V +AG+V+E   YG AEGG  D +++ A+        S+ + ++  NWG+L++ N++  ++ A  AL+AA E   +V  C  I++Q
Sbjct:   67 SKEKRDRILHHEAGHFLVAYLLGIPVTSYA----LNAWE-----AFKQGQTAQGGVRFEDEQLASQL-----------------QNGTLSAQLLDQYCTVWMAGIVAEKFVYGSAEGGAEDRTKISAILTQLRRPSSEIQLKQ--NWGLLRAKNLLESHKSAYEALVAAMENRATVAECCDIIQQ 223          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|1026029819|ref|XP_016561170.1| (PREDICTED: uncharacterized protein LOC107860360 isoform X1 [Capsicum annuum] >gi|1026029821|ref|XP_016561171.1| PREDICTED: uncharacterized protein LOC107860360 isoform X1 [Capsicum annuum])

HSP 1 Score: 88.9669 bits (219), Expect = 7.202e-16
Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 0
Query:  283 NREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
            +++Y  R+++HEAGHFL+ YL G+    Y+++  L+A++                      + G   + + +  V  E  E     G +    L R + ++LAGV +EY+ +G AEGG +D++QL AL  L     + ++ +  + W VL +  ++R++EKA   L  A  +G+SVV C+  +E    +Y+ DD
Sbjct:  161 SQKYHNRVIQHEAGHFLIAYLLGILPKGYTLT-SLDALK----------------------KQGSLNIQAGTAFVDFEFTEE-VNSGKVTATMLNRFSCIALAGVATEYLLFGYAEGGLSDINQLDAL--LKSLGFTQKKADSQVRWAVLNTILILRRHEKARAKLAEAMTKGKSVVVCIDTIE----KYISDD 324          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|493501485|ref|WP_006455994.1| (hypothetical protein [Synechococcus sp. PCC 7335] >gi|196191267|gb|EDX86231.1| hypothetical protein S7335_3934 [Synechococcus sp. PCC 7335])

HSP 1 Score: 86.6557 bits (213), Expect = 1.153e-15
Identity = 59/198 (29.80%), Postives = 99/198 (50.00%), Query Frame = 0
Query:  273 RAANQVLFALNR---EYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEA-ERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVE 466
            R  N ++  ++R   EY++R+L HEAGHFLV +L  +PV SY++S              A EA  A              +P   G V    A E     G +  +++ R  ++ +AG+ +E   YG AEGG +D ++L  L+       S  E +  + W +LQ+  ++ + ++A  AL+ A  +G SV +C+Q++E
Sbjct:   54 RGGNILIDLISRQSSEYRQRILHHEAGHFLVAHLLDIPVQSYTLS--------------AWEATKAG-------------VPGLGGVVLDTAAIENDLATGTISAQQVNRYCILWMAGIAAETQIYGSAEGGEDDQTKLRLLWKQTQRTASAAETQ--IRWALLQAQTLLEKQKQAYDALVEAMSKGSSVESCLQVIE 222          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|697184045|ref|XP_009601047.1| (PREDICTED: uncharacterized protein LOC104096390 isoform X2 [Nicotiana tomentosiformis] >gi|1025213694|ref|XP_016480251.1| PREDICTED: uncharacterized protein LOC107801439 isoform X2 [Nicotiana tabacum])

HSP 1 Score: 87.0409 bits (214), Expect = 1.163e-15
Identity = 58/195 (29.74%), Postives = 100/195 (51.28%), Query Frame = 0
Query:  282 LNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
             +++Y  R+++HEAGHFL+ YL G+    Y+++  L+A++                      + G   + + +  V  E  E    RG +    L R + +SLAGV +EY+ +G AEGG  D++QL AL  L     + ++ +  + W +L +  ++R++EKA   L  A  RG+SV  C+  VE    +Y+ D+
Sbjct:   94 FSQKYHNRVVQHEAGHFLIAYLLGILPKGYTLTS-LDALK----------------------KEGSLNIQAGAAFVDFEFMEE-VNRGKVTATMLNRFSCISLAGVATEYLLFGYAEGGLTDINQLDAL--LKSLGFTQKKADSQVRWALLNTILILRRHEKARAKLAEAMTRGKSVGVCIDTVE----KYISDN 258          
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|612391522|ref|XP_007511282.1| (predicted protein [Bathycoccus prasinos] >gi|424513258|emb|CCO66842.1| predicted protein [Bathycoccus prasinos])

HSP 1 Score: 87.4261 bits (215), Expect = 2.035e-15
Identity = 63/248 (25.40%), Postives = 113/248 (45.56%), Query Frame = 0
Query:  224 VMALSITSALTTLD---KLPGPDIVRW--FATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVE 466
            ++ +++T++L  +     LPG     W  F +  +  +    +++G + P  L++     +  LN EY ER+++HEA HFL+ YL G+PV SYS+      VE  +                                 ++ E +     GV+  EE+  L VV+++GV +E   + K  G   DL  L    N  +P +  ++++    W V ++  +I  NEK+   L  A + G+SV  C++ +E
Sbjct:  105 IVTVTVTTSLLAVIIGVTLPG----DWGAFGSYLMGGVSLVVLAVGSTAPG-LLKVGVDTVSRLNPEYMERIVKHEAAHFLIAYLSGIPVSSYSLGLMEMHVELLE---------------------------------AKIEKKLVGKAGVITTEEMEALAVVAMSGVAAEAKYFEKVAGQEADLFSLQKAMNKTEPKLGAQKEQSVTRWAVYKAARIITDNEKSYEQLCQAMKEGKSVAECVKAIE 314          
The following BLAST results are available for this feature:
BLAST of EWM26562.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108647|gb|EWM26562.1|0.000e+0100.00hypothetical protein Naga_100084g7 [Nannochloropsi... [more]
gi|873239174|emb|CEL94590.1|7.135e-3229.75unnamed protein product [Vitrella brassicaformis C... [more]
gi|219122870|ref|XP_002181760.1|3.732e-2526.96predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072236039|gb|OEU20767.1|3.401e-1930.69hypothetical protein FRACYDRAFT_179918, partial [F... [more]
gi|1026029823|ref|XP_016561172.1|2.899e-1629.38PREDICTED: uncharacterized protein LOC107860360 is... [more]
gi|504987963|ref|WP_015175065.1|3.464e-1631.35hypothetical protein [Oscillatoria nigro-viridis] ... [more]
gi|1026029819|ref|XP_016561170.1|7.202e-1629.38PREDICTED: uncharacterized protein LOC107860360 is... [more]
gi|493501485|ref|WP_006455994.1|1.153e-1529.80hypothetical protein [Synechococcus sp. PCC 7335] ... [more]
gi|697184045|ref|XP_009601047.1|1.163e-1529.74PREDICTED: uncharacterized protein LOC104096390 is... [more]
gi|612391522|ref|XP_007511282.1|2.035e-1525.40predicted protein [Bathycoccus prasinos] >gi|42451... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4130rna4130Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications