EWM26562.1, cds4120 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|585108647|gb|EWM26562.1| (hypothetical protein Naga_100084g7 [Nannochloropsis gaditana]) HSP 1 Score: 966.452 bits (2497), Expect = 0.000e+0 Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0
Query: 1 MPGTSTRRQNFDTGAGKEGGMGGSFTWGSTDQVLRPRTRLRTNGRFYVFVLLLLTSAHAFLPRTPKLTATRYLQASTPVSSKPSSSTTPVATDAAQYWPLLEELVSSCLVDDKAFSPTGSDASPYVRPRQRDVGASGEGMVAIGASLADTRLVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
MPGTSTRRQNFDTGAGKEGGMGGSFTWGSTDQVLRPRTRLRTNGRFYVFVLLLLTSAHAFLPRTPKLTATRYLQASTPVSSKPSSSTTPVATDAAQYWPLLEELVSSCLVDDKAFSPTGSDASPYVRPRQRDVGASGEGMVAIGASLADTRLVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD
Sbjct: 1 MPGTSTRRQNFDTGAGKEGGMGGSFTWGSTDQVLRPRTRLRTNGRFYVFVLLLLTSAHAFLPRTPKLTATRYLQASTPVSSKPSSSTTPVATDAAQYWPLLEELVSSCLVDDKAFSPTGSDASPYVRPRQRDVGASGEGMVAIGASLADTRLVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|873239174|emb|CEL94590.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 137.117 bits (344), Expect = 7.135e-32 Identity = 105/353 (29.75%), Postives = 173/353 (49.01%), Query Frame = 0
Query: 137 GEGMVAIGASLADTR-----LVDGLELMKVRRNKDGSVRSGFLRFWNSVPLEFFGVSRNDLRVYARMRE--RVEKALGFTASPAVERVESGIAIVMALSITSA--LTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWT-------------PRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
GE A+ +LA+ R + LE +K+R DG + W++ + + L++Y +MR+ + L AV+++ G+ V+ L T A L L+ +P D VR+ + L+S+PF Y+++G++ P L +V AL+ + ERL HEA HFLVGYL GLP+ SYS + LN VEF + A +D + G +P P ++ + T P V+ E R VV+ AGV EY+ AEGG D+ + A+ DP + E++ ++ WGV+++Y ++ + + L AL+ +F G S+V C++ +E
Sbjct: 118 GEIWEALTEALAEERTKGEKVAKLLEALKLR---DG------VSLWDAESVLYRPTPLEQLKIYLKMRDVSNPARVLDIDGGSAVDKIALGLG-VLCLVATGAVFLGALNWIPN-DFVRYCVSLALISLPFTYMAVGIARPNDLFFFIAEVWRALSPKTAERLYYHEAAHFLVGYLLGLPIKSYSANSFLNRVEFYDDMDILTAADRPPESLRDRIQAG-FEVPEGDRPREADDDDEVTLRRELRSGERRPRPGTVVNLERAKRAIVVASAGVAGEYLYCESAEGGSADIKWIDAVLRRTDPPLKRDERQDYMRWGVVEAYLLLDKYKTTLDALVDSFRAGRSIVECVKAIED 458
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|219122870|ref|XP_002181760.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407036|gb|EEC46974.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.013 bits (297), Expect = 3.732e-25 Identity = 93/345 (26.96%), Postives = 152/345 (44.06%), Query Frame = 0
Query: 185 FGVSRNDLRVYARM---RERVEKALGFTASPAVERVESGIAIVMALSITSALTTLDKLPGPDIVRWFATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEF------------AQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEE-------------------------------------LARLTVVSLAGVVSEYIAY----------GKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
+G+S DL + R+ + + + + + +R + +M S SA+ LPGP+I+R+ PF ++ G++ PE L V L Y++R+L+HEAGHFL+G+L GLPV Y + NAV F A L F ++ +A V Q+S L + P E T RG L EE L +L+ +S+AGV SE +A+ G AEGG DL+QL ++ A+P++S+R++E + + + + + +R++ AL AL ER ++ C+ +E
Sbjct: 112 WGISDGDLAIQTRLLNSKYSIMDVIELSGNRDADRASLSLLCLMVASTISAIIANQHLPGPEILRFMVVWLFCFSPFIFVGYGIATPEKLQAFLVSVQRELFPAYRQRMLQHEAGHFLMGHLLGLPVAGYQANAVKNAVNFYPLADTDRSFDLASQLGF-DKSLSARRVEQNSEALSADQLSAFDAPFFSE-----TGRGAWLVEERSVFRNAQNYTNNPFLKLASRNEPSNSWPFRGFDEATLDQLSAISVAGVCSEILAFVCIRLFLWAIGNAEGGVADLNQLRQIYRSAEPSISERDEENRIRFALGYTMSQLRRHLGALDALSKIMERDGTIAECVAAIEN 450
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|1072236039|gb|OEU20767.1| (hypothetical protein FRACYDRAFT_179918, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 97.4413 bits (241), Expect = 3.401e-19 Identity = 58/189 (30.69%), Postives = 100/189 (52.91%), Query Frame = 0
Query: 286 YKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETG--PAMLPSKSGPVSR-EEAERWTPRGV----LLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
Y++R+++HEAGHFL+ +L G+P+ Y+ + N+V+F P + + G A + P SR +E T R L+ + +L VVS+AGV +E I++G AEGG D+SQL +FN A+P ++DRE+E + + + + +R + + L + G +V C+ +E+
Sbjct: 7 YRQRMIQHEAGHFLLAHLLGIPIAGYTTNAVKNSVQF---------------YPLNDKDVGREKAEILGFDRPTSRVDEGHLLTRRDAQTTSLILKSNQKLCVVSVAGVCAEIISFGNAEGGIADISQLQQIFNSAEPELTDREKENRIRFAMGYTMTQLRIHLGCIDRLADVMDNGGTVAECVLAIER 180
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|1026029823|ref|XP_016561172.1| (PREDICTED: uncharacterized protein LOC107860360 isoform X2 [Capsicum annuum]) HSP 1 Score: 89.3521 bits (220), Expect = 2.899e-16 Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 0
Query: 283 NREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
+++Y R+++HEAGHFL+ YL G+ Y+++ L+A++ + G + + + V E E G + L R + ++LAGV +EY+ +G AEGG +D++QL AL L + ++ + + W VL + ++R++EKA L A +G+SVV C+ +E +Y+ DD
Sbjct: 123 SQKYHNRVIQHEAGHFLIAYLLGILPKGYTLTS-LDALK----------------------KQGSLNIQAGTAFVDFEFTEE-VNSGKVTATMLNRFSCIALAGVATEYLLFGYAEGGLSDINQLDAL--LKSLGFTQKKADSQVRWAVLNTILILRRHEKARAKLAEAMTKGKSVVVCIDTIE----KYISDD 286
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|504987963|ref|WP_015175065.1| (hypothetical protein [Oscillatoria nigro-viridis] >gi|428239955|gb|AFZ05741.1| hypothetical protein Osc7112_1194 [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 88.1965 bits (217), Expect = 3.464e-16 Identity = 58/185 (31.35%), Postives = 93/185 (50.27%), Query Frame = 0
Query: 283 NREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQ 467
++E ++R+L HEAGHFLV YL G+PV SY+ LNA E +F Q A V + + + G L + L + V +AG+V+E YG AEGG D +++ A+ S+ + ++ NWG+L++ N++ ++ A AL+AA E +V C I++Q
Sbjct: 67 SKEKRDRILHHEAGHFLVAYLLGIPVTSYA----LNAWE-----AFKQGQTAQGGVRFEDEQLASQL-----------------QNGTLSAQLLDQYCTVWMAGIVAEKFVYGSAEGGAEDRTKISAILTQLRRPSSEIQLKQ--NWGLLRAKNLLESHKSAYEALVAAMENRATVAECCDIIQQ 223
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|1026029819|ref|XP_016561170.1| (PREDICTED: uncharacterized protein LOC107860360 isoform X1 [Capsicum annuum] >gi|1026029821|ref|XP_016561171.1| PREDICTED: uncharacterized protein LOC107860360 isoform X1 [Capsicum annuum]) HSP 1 Score: 88.9669 bits (219), Expect = 7.202e-16 Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 0
Query: 283 NREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
+++Y R+++HEAGHFL+ YL G+ Y+++ L+A++ + G + + + V E E G + L R + ++LAGV +EY+ +G AEGG +D++QL AL L + ++ + + W VL + ++R++EKA L A +G+SVV C+ +E +Y+ DD
Sbjct: 161 SQKYHNRVIQHEAGHFLIAYLLGILPKGYTLT-SLDALK----------------------KQGSLNIQAGTAFVDFEFTEE-VNSGKVTATMLNRFSCIALAGVATEYLLFGYAEGGLSDINQLDAL--LKSLGFTQKKADSQVRWAVLNTILILRRHEKARAKLAEAMTKGKSVVVCIDTIE----KYISDD 324
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|493501485|ref|WP_006455994.1| (hypothetical protein [Synechococcus sp. PCC 7335] >gi|196191267|gb|EDX86231.1| hypothetical protein S7335_3934 [Synechococcus sp. PCC 7335]) HSP 1 Score: 86.6557 bits (213), Expect = 1.153e-15 Identity = 59/198 (29.80%), Postives = 99/198 (50.00%), Query Frame = 0
Query: 273 RAANQVLFALNR---EYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEA-ERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVE 466
R N ++ ++R EY++R+L HEAGHFLV +L +PV SY++S A EA A +P G V A E G + +++ R ++ +AG+ +E YG AEGG +D ++L L+ S E + + W +LQ+ ++ + ++A AL+ A +G SV +C+Q++E
Sbjct: 54 RGGNILIDLISRQSSEYRQRILHHEAGHFLVAHLLDIPVQSYTLS--------------AWEATKAG-------------VPGLGGVVLDTAAIENDLATGTISAQQVNRYCILWMAGIAAETQIYGSAEGGEDDQTKLRLLWKQTQRTASAAETQ--IRWALLQAQTLLEKQKQAYDALVEAMSKGSSVESCLQVIE 222
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|697184045|ref|XP_009601047.1| (PREDICTED: uncharacterized protein LOC104096390 isoform X2 [Nicotiana tomentosiformis] >gi|1025213694|ref|XP_016480251.1| PREDICTED: uncharacterized protein LOC107801439 isoform X2 [Nicotiana tabacum]) HSP 1 Score: 87.0409 bits (214), Expect = 1.163e-15 Identity = 58/195 (29.74%), Postives = 100/195 (51.28%), Query Frame = 0
Query: 282 LNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVEQEGGRYLEDD 476
+++Y R+++HEAGHFL+ YL G+ Y+++ L+A++ + G + + + V E E RG + L R + +SLAGV +EY+ +G AEGG D++QL AL L + ++ + + W +L + ++R++EKA L A RG+SV C+ VE +Y+ D+
Sbjct: 94 FSQKYHNRVVQHEAGHFLIAYLLGILPKGYTLTS-LDALK----------------------KEGSLNIQAGAAFVDFEFMEE-VNRGKVTATMLNRFSCISLAGVATEYLLFGYAEGGLTDINQLDAL--LKSLGFTQKKADSQVRWALLNTILILRRHEKARAKLAEAMTRGKSVGVCIDTVE----KYISDN 258
BLAST of EWM26562.1 vs. NCBI_GenBank
Match: gi|612391522|ref|XP_007511282.1| (predicted protein [Bathycoccus prasinos] >gi|424513258|emb|CCO66842.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 87.4261 bits (215), Expect = 2.035e-15 Identity = 63/248 (25.40%), Postives = 113/248 (45.56%), Query Frame = 0
Query: 224 VMALSITSALTTLD---KLPGPDIVRW--FATSFLVSIPFAYISLGLSFPEVLMRAANQVLFALNREYKERLLRHEAGHFLVGYLCGLPVLSYSVSGRLNAVEFAQILSFAQEAAAAATVPQDSSETGPAMLPSKSGPVSREEAERWTPRGVLLKEELARLTVVSLAGVVSEYIAYGKAEGGGNDLSQLLALFNLADPAMSDREQERWLNWGVLQSYNMIRQNEKALVALMAAFERGESVVTCMQIVE 466
++ +++T++L + LPG W F + + + +++G + P L++ + LN EY ER+++HEA HFL+ YL G+PV SYS+ VE + ++ E + GV+ EE+ L VV+++GV +E + K G DL L N +P + ++++ W V ++ +I NEK+ L A + G+SV C++ +E
Sbjct: 105 IVTVTVTTSLLAVIIGVTLPG----DWGAFGSYLMGGVSLVVLAVGSTAPG-LLKVGVDTVSRLNPEYMERIVKHEAAHFLIAYLSGIPVSSYSLGLMEMHVELLE---------------------------------AKIEKKLVGKAGVITTEEMEALAVVAMSGVAAEAKYFEKVAGQEADLFSLQKAMNKTEPKLGAQKEQSVTRWAVYKAARIITDNEKSYEQLCQAMKEGKSVAECVKAIE 314 The following BLAST results are available for this feature:
BLAST of EWM26562.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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