EWM26552.1, cds4119 (CDS) Nannochloropsis gaditana

Overview
NameEWM26552.1
Unique Namecds4119
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:938618..940062 +
Alignment locationCM002462.1:940228..940648 +
Alignment locationCM002462.1:940885..941229 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26552.1
Productkatanin p60 atpase-containing subunit
Orig transcript idgnl|cribi|Naga_100084g8.1560.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:938618..940062 +
CM002462.1supercontigCM002462.1:940228..940648 +
CM002462.1supercontigCM002462.1:940885..941229 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
IPR005398Tubby_N
Homology
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|585108637|gb|EWM26552.1| (katanin p60 atpase-containing subunit [Nannochloropsis gaditana])

HSP 1 Score: 1501.11 bits (3885), Expect = 0.000e+0
Identity = 736/736 (100.00%), Postives = 736/736 (100.00%), Query Frame = 0
Query:    1 MRAESAALSQLAQMLENLNKNENFHKALQAHVVAQHQQLQQMGLAPPSRPSSFPPSPFPPPPAGMANPNPAAAALHLRYQQLQHLQQQQQQQQQQQQQQQQQQQQQQPQIPGAPPGVTLGPNGLPHYMGSPMVPAYQITFAFPPLEGNAALSSSSPSSAASPAPSPARRRKNASTAAASAGRRDRTGPRKGASGREGGGGGGGGLPFARWFSKKGEASSFPSSTPASPPRRSASAHGRGRTRRVASPLSLPSDSSLSDTPPSLAAQEALLGLFEDVLLLPTKDSSLRARWDKLVADDHERYNAKRAYAILKQALALHRLLCPDLSPTHPLLYKVQLQAGAETLKVLETAVEVEVGKRGEEGHSGEGGLPRVVTEDDGAFHLLSLEGLETALGMVCKTSVPRPGVPVSRTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVEVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKKVQPPHMSMYV 736
            MRAESAALSQLAQMLENLNKNENFHKALQAHVVAQHQQLQQMGLAPPSRPSSFPPSPFPPPPAGMANPNPAAAALHLRYQQLQHLQQQQQQQQQQQQQQQQQQQQQQPQIPGAPPGVTLGPNGLPHYMGSPMVPAYQITFAFPPLEGNAALSSSSPSSAASPAPSPARRRKNASTAAASAGRRDRTGPRKGASGREGGGGGGGGLPFARWFSKKGEASSFPSSTPASPPRRSASAHGRGRTRRVASPLSLPSDSSLSDTPPSLAAQEALLGLFEDVLLLPTKDSSLRARWDKLVADDHERYNAKRAYAILKQALALHRLLCPDLSPTHPLLYKVQLQAGAETLKVLETAVEVEVGKRGEEGHSGEGGLPRVVTEDDGAFHLLSLEGLETALGMVCKTSVPRPGVPVSRTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVEVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKKVQPPHMSMYV
Sbjct:    1 MRAESAALSQLAQMLENLNKNENFHKALQAHVVAQHQQLQQMGLAPPSRPSSFPPSPFPPPPAGMANPNPAAAALHLRYQQLQHLQQQQQQQQQQQQQQQQQQQQQQPQIPGAPPGVTLGPNGLPHYMGSPMVPAYQITFAFPPLEGNAALSSSSPSSAASPAPSPARRRKNASTAAASAGRRDRTGPRKGASGREGGGGGGGGLPFARWFSKKGEASSFPSSTPASPPRRSASAHGRGRTRRVASPLSLPSDSSLSDTPPSLAAQEALLGLFEDVLLLPTKDSSLRARWDKLVADDHERYNAKRAYAILKQALALHRLLCPDLSPTHPLLYKVQLQAGAETLKVLETAVEVEVGKRGEEGHSGEGGLPRVVTEDDGAFHLLSLEGLETALGMVCKTSVPRPGVPVSRTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVEVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKKVQPPHMSMYV 736          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|299117104|emb|CBN73875.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 493.041 bits (1268), Expect = 8.915e-167
Identity = 246/358 (68.72%), Postives = 293/358 (81.84%), Query Frame = 0
Query:  387 LETALGMVCKTSVPRPGVPVSRTKEEVTALAQ-NRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPG-TGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDA--QGV-EVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKK---VQPPHMSMYV 736
            +ETA   VCK  VPRPG P+SRT+EEVTALAQ +RHE ALV NVI P DIGVTY  IGGL   KE LRQC+TYPLRFPHLYSEGIA ++VKGVLLFGPPG  G+TMLAKAVATEGGATFLSVDASVIE+KWLGESEKNA+AVFTLARRLAPCV+++DEVDS+LSSR++ +DT + T+TSVKTT MQEWDGLRT  DRV+V+ASTNRP+ LD+AVLRR+PRRILVDLPD +TRE++L+  +A NR+   VN T+I + LEG+TGSDI+EVCREAVVRIAHE++++LD A   GV E   L  +LRPV   DF  A +KL+ASV+ +GREL RV EWN  +GEV+KK       H+SMY+
Sbjct:    1 METAFAAVCKAYVPRPGQPMSRTREEVTALAQHDRHEQALVTNVILPKDIGVTYDMIGGLGGAKELLRQCITYPLRFPHLYSEGIAKEAVKGVLLFGPPGGRGRTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIFIDEVDSVLSSREKYDDTTHGTLTSVKTTLMQEWDGLRTGGDRVVVIASTNRPFDLDEAVLRRLPRRILVDLPDAETREEILKVSMAQNRVDASVNFTAITEELEGFTGSDIKEVCREAVVRIAHEKAQELDRAGVNGVREEVDLTAQLRPVTMDDFWEARKKLTASVSEKGRELSRVWEWNEEYGEVKKKRPDASAHHLSMYL 358          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|873237281|emb|CEL97961.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 477.633 bits (1228), Expect = 3.666e-150
Identity = 231/370 (62.43%), Postives = 295/370 (79.73%), Query Frame = 0
Query:  387 LETALGMVCKTSVPRPGVPVSRTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVE--------VGALGQR-------LRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKKVQ-----PPHMSMYV 736
            LE+AL  + +  VPRPG PV R++EEV +LA N+HE +LV NV+SP DI VTY +IGGL +VKE LR+C+TYPL++PHLY EGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDAS +E+ WLGESEK AKAVFTLAR+LAPCV++LDEVDS+LSSRD+G+DT + T+TS+KTT MQEWDGLRTT DRV+V+ STNRP+ALD+AVLRRMPRRILVDLPD KTRE++L+  L+NNR+AP+VN+T +A ++EGYTGSDI+EVCR+ V +I+HE++++L+     E         G +G +       LRPV   D   A++KLSASV   GRELER+ EWN+ +GE+++K       P H+S+Y+
Sbjct:  823 LESAL--MEEGVVPRPGEPVVRSREEVASLASNKHEKSLVANVVSPQDIHVTYDQIGGLEEVKELLRECITYPLKYPHLYQEGIAEEAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASSVENMWLGESEKMAKAVFTLARKLAPCVIFLDEVDSLLSSRDRGDDTTHGTLTSLKTTLMQEWDGLRTTRDRVVVIGSTNRPFALDEAVLRRMPRRILVDLPDNKTREEILRVTLSNNRLAPDVNVTDLALQMEGYTGSDIKEVCRDGVTKISHEQARQLESHLRKEGNVPSAPASGVMGDQAIASPTELRPVTADDLKQAMKKLSASVNQSGRELERMWEWNDKYGEIKRKAMKRKPWPNHLSVYL 1190          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|219111347|ref|XP_002177425.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411960|gb|EEC51888.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 440.269 bits (1131), Expect = 1.784e-146
Identity = 220/338 (65.09%), Postives = 272/338 (80.47%), Query Frame = 0
Query:  416 LAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT-TN-------DRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDA-----QGVEVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVR--KKVQPPHM-SMYV 736
            LAQ++HE AL+  V+SP DIGVTY  IGGL +VKE LRQ +TYPL+FPHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCV+++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL + TN       +RV+V+ STNRP+ LD+AVLRR PRRILVDLPD +TR ++L+  LA NR+ PEVNLT IA+RLEGYTGSDI+EVCREAVV+I+HE+++ LD       + +  G+L QRLRPV   DF+ AL KL  SV+ +GREL RV EWN+ +GE++  KK   PH+ +MY+
Sbjct:    1 LAQDKHERALISQVVSPQDIGVTYDMIGGLNEVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFVDEVDSLLSSREGTSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGEAGSERVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRTEILEVTLAENRLDPEVNLTQIAERLEGYTGSDIKEVCREAVVQISHEQARLLDQGFMNTREDMTQGSL-QRLRPVTAEDFETALNKLKRSVSEKGRELARVWEWNDEYGEIKKEKKNHLPHLANMYL 337          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|1210530147|dbj|GAX11255.1| (hypothetical protein FisN_34Hh023 [Fistulifera solaris])

HSP 1 Score: 468.389 bits (1204), Expect = 8.270e-146
Identity = 239/371 (64.42%), Postives = 291/371 (78.44%), Query Frame = 0
Query:  387 LETALGMVCKTSVPR--------PGVPVSRTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT----TNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDA-QGV----EVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRK--KVQPPHM-SMYV 736
            LE+AL MVC+ S            G    RT+EE+TALAQ++HE AL+  V+SP DIGVTY  IGGL++VKE LRQ +TYPL++PHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCV+++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +    + DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD KTR ++L+  LA NRI P VN T IA+RLEGYTGSDI+EVCREAVV+I+HE++K+LD+  QGV     VG+L QRLRPV   DF+ AL KL  SV+  GREL RV EWN  +GEV+K  K   PH+ +MY+
Sbjct:  916 LESALTMVCRISSSPSGGLSLSGAGTVAHRTREEITALAQDKHERALISQVVSPQDIGVTYDMIGGLSEVKELLRQSITYPLKYPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLKTRSEILEVTLAENRIDPAVNFTKIAERLEGYTGSDIKEVCREAVVQISHEQAKQLDEGLQGVRMDTSVGSL-QRLRPVTVEDFEKALSKLKRSVSENGRELARVWEWNAEYGEVKKMDKDHLPHLANMYL 1285          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|1210527894|dbj|GAX13425.1| (hypothetical protein FisN_34Lh023 [Fistulifera solaris])

HSP 1 Score: 468.003 bits (1203), Expect = 1.163e-145
Identity = 239/371 (64.42%), Postives = 291/371 (78.44%), Query Frame = 0
Query:  387 LETALGMVCKTSVPR--------PGVPVSRTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT----TNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDA-QGV----EVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRK--KVQPPHM-SMYV 736
            LE+AL +VC+ S            G    RT+EE+TALAQ++HE AL+  V+SP DIGVTY  IGGL++VKE LRQ +TYPL++PHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCV+++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +    + DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD KTR ++L+  LA NRI P VN T IA+RLEGYTGSDI+EVCREAVV+I+HE++K+LD+  QGV     VG+L QRLRPV   DF+ AL KL  SV+  GREL RV EWN  +GEV+K  K   PH+ SMY+
Sbjct:  919 LESALTIVCRISSSPSGGLSLSGAGTVAHRTREEITALAQDKHERALISQVVSPQDIGVTYDMIGGLSEVKELLRQSITYPLKYPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLKTRSEILEVTLAENRIDPAVNFTKIAERLEGYTGSDIKEVCREAVVQISHEQAKQLDEGLQGVRMDTSVGSL-QRLRPVTMEDFEKALSKLKRSVSENGRELARVWEWNAEYGEVKKMDKNHLPHLASMYL 1288          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|223994525|ref|XP_002286946.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220978261|gb|EED96587.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 436.802 bits (1122), Expect = 4.936e-145
Identity = 213/333 (63.96%), Postives = 267/333 (80.18%), Query Frame = 0
Query:  408 RTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT-TN-------DRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVE---------VGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGE 722
            R+KE++ ALAQ++HE AL+ N +SP DIGVTY  IGGL DVKE LRQ +TYPL+FPHLYSEGIA ++VKGVLL+GPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCV+++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL + TN       DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD +TR ++L+  L+ NR+  +VNLT IA+RLEGYTGSD++EVCREAVV+I+HE+++ LD  + ++          GA  Q LRPV   DF++A+ KL  SV+  GREL+RV EWN+ +GE
Sbjct:   12 RSKEDLMALAQDKHERALIPNCVSPNDIGVTYDMIGGLTDVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLYGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGKGDAGSDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRREILEVTLSENRLGSDVNLTMIAERLEGYTGSDLKEVCREAVVQISHEQARMLDRGELLDDSDDETDGFTGAGFQMLRPVTMKDFESAMRKLKRSVSETGRELQRVWEWNDEYGE 344          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|397643685|gb|EJK76019.1| (hypothetical protein THAOC_02237 [Thalassiosira oceanica])

HSP 1 Score: 453.751 bits (1166), Expect = 1.417e-136
Identity = 235/396 (59.34%), Postives = 296/396 (74.75%), Query Frame = 0
Query:  373 TEDDGAFHLLSLEGLETALGMVCKTSVPRPGVPVS-------------RTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT-TN-------DRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLD-------DAQGV--EVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKK---VQPPHMSM 734
            ++D G+  L+    LE+AL +VC  S P PG   S             RT+E++ ALAQ++HE ALV N +SP DIGVTY  IGGL +VKE LRQ +TYPL+FPHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCVV++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL + TN       DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD +TR ++L+  L+ NR+  +VNLT IA+RL+GYTGSD++EVCREAVV+I+HE+++ LD       D +G     GA  Q LRPV   DF++A+ KL  SV+  GREL +V EWN+ +GE++KK   + PP M+M
Sbjct: 1338 SDDSGSLKLIHPHSLESALSLVCGVS-PSPGSQGSPSFSSASGVMAGHRTREDLMALAQDKHERALVPNCVSPRDIGVTYDMIGGLGEVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVVFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGKGDGGSDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRREILEVTLSENRLGGDVNLTLIAERLDGYTGSDLKEVCREAVVQISHEQARMLDRGEILDEDDEGYVDTSGAGFQMLRPVTMKDFESAMRKLKRSVSETGRELAKVWEWNDEYGEMKKKRRDLLPPMMNM 1732          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|1072231887|gb|OEU16619.1| (AAA-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 401.749 bits (1031), Expect = 6.639e-132
Identity = 201/308 (65.26%), Postives = 250/308 (81.17%), Query Frame = 0
Query:  442 IGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT-TN---DRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDA-----QGVEVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKKV--QPPH-MSMYV 736
            +GGL +VKE LRQ +TYPL+FPHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCVV++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL + TN   DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD +TR ++L+  LA NR+   VNLT IA+RLEGYTGSD++EVCREAVV+I+HE+++ LD       + +  G+L QRLRPV   DF+ A+ KL  SV+ +GREL RV EWN+ +GE++K+     PH M+MY+
Sbjct:    2 VGGLTNVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVVFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRAEILEVTLAENRLDSAVNLTQIAERLEGYTGSDLKEVCREAVVQISHEQARLLDQGFDNTREDITEGSL-QRLRPVTVNDFETAMGKLKRSVSEKGRELARVWEWNDEYGEIKKEKPNNLPHLMNMYL 308          
BLAST of EWM26552.1 vs. NCBI_GenBank
Match: gi|676393759|ref|XP_009040157.1| (hypothetical protein AURANDRAFT_3580, partial [Aureococcus anophagefferens] >gi|323449248|gb|EGB05138.1| hypothetical protein AURANDRAFT_3580, partial [Aureococcus anophagefferens])

HSP 1 Score: 401.364 bits (1030), Expect = 1.605e-131
Identity = 188/311 (60.45%), Postives = 243/311 (78.14%), Query Frame = 0
Query:  419 NRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVEVGALG-QRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKKVQ 728
            ++HE AL+GNV++P+D+ VTY  IGGL   K  LR+ +TYPL++P LY EG+A ++ KGVLLFGPPGTGKTMLAKAVATEGGA+FL+VDAS IE+KWLGESEKNAKAVF+LAR+LAPCVV+ DE+D++LSSR+ G+DT + T+TSVKTT MQEWDGL+TT DRV+V+ STNRPY LD+AVLRR+PRR+LVDLPD+ +R  +L   LA NR+   V+L  +A +LEGY+GSD +EVCREA+     E +   DD +     AL   +LR    ADF+AA+ KLS+SVA  G E+ +V EWN  +GEV+K+ +
Sbjct:    1 DKHEKALLGNVVAPSDVAVTYDMIGGLDAAKTALREAITYPLKYPALYEEGVAREACKGVLLFGPPGTGKTMLAKAVATEGGASFLAVDASAIENKWLGESEKNAKAVFSLARKLAPCVVFFDEIDAVLSSREGGDDTSHGTLTSVKTTLMQEWDGLKTTRDRVVVIGSTNRPYDLDEAVLRRLPRRVLVDLPDKASRRAILDVTLARNRLDASVDLDGVAAKLEGYSGSDCKEVCREAIHADELEATALTDDLKAKCAAALDPPKLREARAADFEAAIAKLSSSVADSGPEMAKVLEWNAQYGEVKKRTK 311          
The following BLAST results are available for this feature:
BLAST of EWM26552.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108637|gb|EWM26552.1|0.000e+0100.00katanin p60 atpase-containing subunit [Nannochloro... [more]
gi|299117104|emb|CBN73875.1|8.915e-16768.72conserved unknown protein [Ectocarpus siliculosus][more]
gi|873237281|emb|CEL97961.1|3.666e-15062.43unnamed protein product [Vitrella brassicaformis C... [more]
gi|219111347|ref|XP_002177425.1|1.784e-14665.09predicted protein, partial [Phaeodactylum tricornu... [more]
gi|1210530147|dbj|GAX11255.1|8.270e-14664.42hypothetical protein FisN_34Hh023 [Fistulifera sol... [more]
gi|1210527894|dbj|GAX13425.1|1.163e-14564.42hypothetical protein FisN_34Lh023 [Fistulifera sol... [more]
gi|223994525|ref|XP_002286946.1|4.936e-14563.96predicted protein, partial [Thalassiosira pseudona... [more]
gi|397643685|gb|EJK76019.1|1.417e-13659.34hypothetical protein THAOC_02237 [Thalassiosira oc... [more]
gi|1072231887|gb|OEU16619.1|6.639e-13265.26AAA-domain-containing protein [Fragilariopsis cyli... [more]
gi|676393759|ref|XP_009040157.1|1.605e-13160.45hypothetical protein AURANDRAFT_3580, partial [Aur... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4129rna4129Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications