EWM26651.1, cds4089 (CDS) Nannochloropsis gaditana

Overview
NameEWM26651.1
Unique Namecds4089
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:851191..851913 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26651.1
ProductPeroxiredoxin-like protein
Orig transcript idgnl|cribi|Naga_100001g13.8162.mrna
GeneSELU
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:851191..851913 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|585108739|gb|EWM26651.1| (Peroxiredoxin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 488.419 bits (1256), Expect = 1.313e-174
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
Query:    1 MPVRLFTKTHLTQFLAVGTLLSGTTLVGVRAFASPAGHPTTTRMSASTTGRPSTSTSTASTLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVDGQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
            MPVRLFTKTHLTQFLAVGTLLSGTTLVGVRAFASPAGHPTTTRMSASTTGRPSTSTSTASTLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVDGQGEVVYQYNEKVFGDHAPLEEVYSAASKL
Sbjct:    1 MPVRLFTKTHLTQFLAVGTLLSGTTLVGVRAFASPAGHPTTTRMSASTTGRPSTSTSTASTLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVDGQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|675852214|ref|XP_009011667.1| (hypothetical protein HELRODRAFT_73106 [Helobdella robusta] >gi|555706620|gb|ESO09853.1| hypothetical protein HELRODRAFT_73106 [Helobdella robusta])

HSP 1 Score: 119.398 bits (298), Expect = 5.218e-30
Identity = 81/191 (42.41%), Postives = 110/191 (57.59%), Query Frame = 0
Query:   44 MSASTTGRPSTSTSTASTLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLG--DRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVD-GQGEVVYQYNEKVFGDHAPLE 231
            M +ST+G  S   +T   L  I L+K+ G     GG+ +A  L K  GAVI VVRRPGCILCREEA +L T+L  +     K   L AVV E   V+ F   F G + +LD ER   KF G  +RW+ L G+  PSVW +  RA++K+  + G+ +GEGR LGGL V+  G   ++ ++ E  FG+H   E
Sbjct:    1 MDSSTSG--SHEKATIQYLKNINLKKIDGSDD--GGSFKASELWKDGGAVIMVVRRPGCILCREEAAEL-TKLKQKFN--DKNFSLFAVVHELMGVEEFRNFFDG-EVFLDPER---KFYGPKERWMSLAGLLRPSVWLSLIRAKRKH--VSGNTEGEGRLLGGLFVIGPGDKGILLEHRESEFGNHVDRE 178          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|1191033566|ref|XP_020893876.1| (redox-regulatory protein FAM213A-like isoform X2 [Exaiptasia pallida])

HSP 1 Score: 104.76 bits (260), Expect = 5.650e-24
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 0
Query:   60 STLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLG--DRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVD-GQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
            + L  I ++K+ G  + L     A +L +  GA+I V+RR G  LCREEA  + T L P L  +     L+ +V E T V  F + F G + +LD ER   KF G  +R++ + G     VW++  RA+ K  G EG+LKGEGR LGG+ V++ G   ++ Q+ EK FGDH  L++V  A  K+
Sbjct:   33 NYLSHIKVQKLDGSDSFLP----ATDLWRKKGAIIMVIRRAGUSLCREEA-SMLTSLKPELDQL--GVPLVGIVHEKTGVKSFQKYFSG-EIFLDSER---KFYGPEERYMFISGFLRLGVWQSFFRAKNK--GFEGNLKGEGRILGGVXVMNAGDQGILLQHQEKEFGDHVELDDVRKAIQKI 203          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|1191033564|ref|XP_020893875.1| (redox-regulatory protein FAM213A-like isoform X1 [Exaiptasia pallida])

HSP 1 Score: 104.76 bits (260), Expect = 7.036e-24
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 0
Query:   60 STLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLG--DRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVD-GQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
            + L  I ++K+ G  + L     A +L +  GA+I V+RR G  LCREEA  + T L P L  +     L+ +V E T V  F + F G + +LD ER   KF G  +R++ + G     VW++  RA+ K  G EG+LKGEGR LGG+ V++ G   ++ Q+ EK FGDH  L++V  A  K+
Sbjct:   46 NYLSHIKVQKLDGSDSFLP----ATDLWRKKGAIIMVIRRAGUSLCREEA-SMLTSLKPELDQL--GVPLVGIVHEKTGVKSFQKYFSG-EIFLDSER---KFYGPEERYMFISGFLRLGVWQSFFRAKNK--GFEGNLKGEGRILGGVXVMNAGDQGILLQHQEKEFGDHVELDDVRKAIQKI 216          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|1121980554|ref|XP_010712416.2| (PREDICTED: redox-regulatory protein FAM213A [Meleagris gallopavo])

HSP 1 Score: 104.375 bits (259), Expect = 1.102e-23
Identity = 73/163 (44.79%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   81 IRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAET--TSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVD-GQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
             +A  L K +GAVI  VRRPG  LCREEA +LS+ L P+L   K    L AVV E   T V+ F   FKG + +LDE+RSF      R + L G F   VW+N  RA K   G  G+L+GEG  LGG+ V+  G+  V+ ++ EK FGD   L  V  AA K+
Sbjct:   64 FKASELWKKNGAVIMAVRRPGUFLCREEASELSS-LKPQLS--KLGVPLYAVVKEKIGTEVEDFQHYFKG-EIFLDEKRSFYG-PRKRKMMLSGFFRIGVWQNFFRAWKN--GYSGNLEGEGFTLGGVYVIGAGRQGVLLEHREKEFGDKVSLPSVLEAAEKI 219          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|844287335|gb|AKN04697.1| (selenoprotein u, partial [Meleagris gallopavo])

HSP 1 Score: 103.99 bits (258), Expect = 1.438e-23
Identity = 73/163 (44.79%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   81 IRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAET--TSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVD-GQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
             +A  L K +GAVI  VRRPG  LCREEA +LS+ L P+L   K    L AVV E   T V+ F   FKG + +LDE+RSF      R + L G F   VW+N  RA K   G  G+L+GEG  LGG+ V+  G+  V+ ++ EK FGD   L  V  AA K+
Sbjct:   59 FKASELWKKNGAVIMAVRRPGUFLCREEASELSS-LKPQLS--KLGVPLYAVVKEKIGTEVEDFQHYFKG-EIFLDEKRSFYG-PRKRKMMLSGFFRIGVWQNFFRAWKN--GYSGNLEGEGFTLGGVYVIGAGRQGVLLEHREKEFGDKVSLPSVLEAAEKI 214          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|298710530|emb|CBJ25594.1| (Peroxiredoxin-like protein [Ectocarpus siliculosus])

HSP 1 Score: 102.834 bits (255), Expect = 2.492e-23
Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = 0
Query:   44 MSASTTGRPSTSTSTASTLFPIPLRKVT-----GEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAETTSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVDGQGE-VVYQYNEKVFGDHAPLEEVYSA 236
            +  +T+ + ++   T   +  I L+++T        A  GG+I A +L K   A++FVVRRPGC LCRE A DLS +  P      K  KL+ VV E   V+ F   FK  + Y DEE++F   LG RW GL  +  PSV  N  RA  K  G++G+LKGEGR LGGL+VV      + +++ E VFGDHA ++ + +A
Sbjct:   10 VQGNTSAKAASEPVTTEKIKDIGLQRMTVAGRDTPVATAGGSIPAGDLWKDQPAIVFVVRRPGCALCREHAQDLSNK-QPDFAA--KGVKLVGVVHEKLGVEEFSGFFKNGEIYFDEEKAFFNALGMRWEGLSSLMKPSVISNAKRASAK--GVKGNLKGEGRLLGGLLVVGSGDSGIAFEHREAVFGDHASMDAIMAA 203          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|302058247|ref|NP_001180447.1| (redox-regulatory protein FAM213A [Gallus gallus] >gi|302058249|ref|NP_001180448.1| redox-regulatory protein FAM213A [Gallus gallus] >gi|816888189|gb|AKF02795.1| selenoprotein U [Gallus gallus])

HSP 1 Score: 102.834 bits (255), Expect = 3.146e-23
Identity = 72/163 (44.17%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   81 IRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAET--TSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVD-GQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
             +A  L K +GAVI  VRRPG  LCREEA +LS+ L P+L   K    L AVV E   T V+ F   F+G + +LDE+RSF      R + L G F   VW+N  RA K   G  G+L+GEG  LGG+ V+  G+  V+ ++ EK FGD   L  V  AA K+
Sbjct:   64 FKASELWKKNGAVIMAVRRPGUFLCREEASELSS-LKPQLS--KLGVPLYAVVKEKIGTEVEDFQHYFQG-EIFLDEKRSFYG-PRKRKMMLSGFFRIGVWQNFFRAWKN--GYSGNLEGEGFTLGGVYVIGAGRQGVLLEHREKEFGDKVSLPSVLEAAEKI 219          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|1201887290|ref|XP_021253645.1| (redox-regulatory protein FAM213A [Numida meleagris])

HSP 1 Score: 102.834 bits (255), Expect = 3.608e-23
Identity = 73/163 (44.79%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   81 IRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAET--TSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVVD-GQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
             +A  L K +GAVI  VRRPG  LCREEA +LS+ L P+L   K    L AVV E   T V+ F   FKG + +LDE+RSF      R + L G F   VW+N  RA K   G  G+L+GEG  LGG+ V+  G+  V+ ++ EK FGD   L  V  AA K+
Sbjct:   64 FKAGELWKKNGAVIMAVRRPGUFLCREEASELSS-LKPQLS--KLGVPLYAVVKEKIGTEVEDFQHYFKG-EIFLDEKRSFYG-PRKRKMMLSGFFRIGVWQNFLRAWKN--GYSGNLEGEGFTLGGVYVIGAGRQGVLLEHREKEFGDKVSLPSVLEAAEKI 219          
BLAST of EWM26651.1 vs. NCBI_GenBank
Match: gi|1169039618|ref|XP_020472215.1| (redox-regulatory protein FAM213A-like [Monopterus albus])

HSP 1 Score: 102.449 bits (254), Expect = 4.363e-23
Identity = 75/187 (40.11%), Postives = 102/187 (54.55%), Query Frame = 0
Query:   57 STASTLFPIPLRKVTGEAAALGGAIRAENLIKPDGAVIFVVRRPGCILCREEAMDLSTQLAPRLKGIKKKPKLMAVVAET--TSVDGFLEAFKGFDTYLDEERSFQKFLGDRWLGLKGMFYPSVWKNGSRAQKKYPGLEGDLKGEGRRLGGLVVV-DGQGEVVYQYNEKVFGDHAPLEEVYSAASKL 240
            +T   L    L+ + GE   L    +AE+L    GAVI  VRRPG  LCREEA +LS+ L P+L  +     L AVV E   T V  F   FKG + +LDE+R F     +R +GL       VW NG RA KK  G  G+++GEG  LGG+ V+  GQ  ++ ++ E  FGD   +E+V  AA ++
Sbjct:   33 ATLQHLRETELKTLRGEIKTL----KAESLWDKSGAVIMAVRRPGUFLCREEAAELSS-LKPQLDEL--GVPLYAVVKEDVGTEVQNFRPYFKG-EIFLDEKRCFYG-PRERKMGLLAFLRVGVWINGLRAYKK--GFMGNVQGEGYVLGGVFVIGRGQQGILLEHREIEFGDQVNIEDVIRAARRI 208          
The following BLAST results are available for this feature:
BLAST of EWM26651.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108739|gb|EWM26651.1|1.313e-174100.00Peroxiredoxin-like protein [Nannochloropsis gadita... [more]
gi|675852214|ref|XP_009011667.1|5.218e-3042.41hypothetical protein HELRODRAFT_73106 [Helobdella ... [more]
gi|1191033566|ref|XP_020893876.1|5.650e-2438.59redox-regulatory protein FAM213A-like isoform X2 [... [more]
gi|1191033564|ref|XP_020893875.1|7.036e-2438.59redox-regulatory protein FAM213A-like isoform X1 [... [more]
gi|1121980554|ref|XP_010712416.2|1.102e-2344.79PREDICTED: redox-regulatory protein FAM213A [Melea... [more]
gi|844287335|gb|AKN04697.1|1.438e-2344.79selenoprotein u, partial [Meleagris gallopavo][more]
gi|298710530|emb|CBJ25594.1|2.492e-2340.20Peroxiredoxin-like protein [Ectocarpus siliculosus... [more]
gi|302058247|ref|NP_001180447.1|3.146e-2344.17redox-regulatory protein FAM213A [Gallus gallus] >... [more]
gi|1201887290|ref|XP_021253645.1|3.608e-2344.79redox-regulatory protein FAM213A [Numida meleagris... [more]
gi|1169039618|ref|XP_020472215.1|4.363e-2340.11redox-regulatory protein FAM213A-like [Monopterus ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4099rna4099Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications