EWM26760.1, cds4082 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|585108848|gb|EWM26760.1| (heat shock protein hsp20 [Nannochloropsis gaditana]) HSP 1 Score: 462.996 bits (1190), Expect = 4.718e-165 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
Query: 1 MFSQAFTPRKKPQVNMMRQSCRSLGHAGRAVTSAYSYRTTQPALPVRCLSSRATRSVAPRGSGNRHGQVVSRGPGGPPWANLGRIFDDMGMEVFNDPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
MFSQAFTPRKKPQVNMMRQSCRSLGHAGRAVTSAYSYRTTQPALPVRCLSSRATRSVAPRGSGNRHGQVVSRGPGGPPWANLGRIFDDMGMEVFNDPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK
Sbjct: 1 MFSQAFTPRKKPQVNMMRQSCRSLGHAGRAVTSAYSYRTTQPALPVRCLSSRATRSVAPRGSGNRHGQVVSRGPGGPPWANLGRIFDDMGMEVFNDPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|980039113|emb|CUS97536.1| (heat shock protein Hsp20 [Candidatus Chrysopegis kryptomonas]) HSP 1 Score: 101.293 bits (251), Expect = 1.357e-23 Identity = 58/145 (40.00%), Postives = 87/145 (60.00%), Query Frame = 0
Query: 88 DMGMEVFN---------DPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
D+ E+F+ D FFR F + + + +DI+ET+ EYIV+AE+PGV K+DVKVT D VL IS E+KQE ++E+ H + YG +RS +P A + D V+A +DGVLT+K+ K E++K ++I +K
Sbjct: 11 DLATEIFDLQREINKMFDRFFRGF---EEEEEVRISTWSPRVDISETDDEYIVRAEIPGVSKDDVKVTIRDNVLTISGEKKQEKETKNENF--HRIERVYGSFTRSFTLPGAVKVDKVEAKFKDGVLTIKLPKVEEAKTKEIEVK 150
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|825292014|ref|WP_047134497.1| (Hsp20/alpha crystallin family protein [Candidatus Kryptonium thompsoni] >gi|951280920|emb|CUS94089.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|951283899|emb|CUT04627.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|962433769|emb|CUU07710.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|979975929|emb|CUS86020.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|980078870|emb|CUS76560.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|980133341|emb|CUS88672.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|980151450|emb|CUS88090.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|980173965|emb|CUT02074.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni] >gi|980231924|emb|CUS82850.1| heat shock protein Hsp20 [Candidatus Kryptonium thompsoni]) HSP 1 Score: 101.293 bits (251), Expect = 1.394e-23 Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 88 DMGMEVFN---------DPFFRPFFARGPGGAMEAAEVAM-----GLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQ--EAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
D+ E+F+ D FFR F E E+ M +DI+ET+ EYIV+AE+PGV K+DVK+T D +L IS E+KQ EA GE+ H + YG SRS +P + + D V+A +DGVLT+K+ K E++KP++I IK
Sbjct: 11 DLATEIFDLQKEINRMFDRFFRGF---------EDEEIRMISWSPRVDISETDDEYIVRAEIPGVSKDDVKITIKDDILTISGEKKQEKEAKGENFHRIER----VYGSFSRSFALPGSVKVDKVEAKFKDGVLTIKLPKVEEAKPREIEIK 149
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|1117392013|ref|WP_072150049.1| (Hsp20/alpha crystallin family protein [Candidatus Kryptobacter tengchongensis] >gi|951279975|emb|CUS99313.1| HSP20 family protein [Candidatus Kryptobacter tengchongensis] >gi|962437053|emb|CUU06232.1| HSP20 family protein [Candidatus Kryptobacter tengchongensis]) HSP 1 Score: 98.9821 bits (245), Expect = 1.296e-22 Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = 0
Query: 88 DMGMEVFN---------DPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
D+ E+F+ D FFR F M+ + +DI+ET+ EYIV+A++PGV K+D+K+T D VL IS E+KQE ++E+ H + YG +R+ +P A + D V+A +DGVLT+K+ K E++K ++I +K
Sbjct: 11 DLATEIFDLQREINRMFDRFFRGFEEEEELKVMKWSP---RVDISETDDEYIVRADVPGVSKDDIKITIKDNVLTISGEKKQEKETKNENF--HRIERVYGSFTRTFTLPGAVKVDKVEARFKDGVLTIKLPKVEEAKAKEIEVK 150
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|1117426050|ref|WP_072151514.1| (Hsp20/alpha crystallin family protein [Candidatus Kryptobacter tengchongensis] >gi|951277990|emb|CUS83436.1| HSP20 family protein [Candidatus Kryptobacter tengchongensis]) HSP 1 Score: 98.5969 bits (244), Expect = 1.605e-22 Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = 0
Query: 88 DMGMEVFN---------DPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
D+ E+F+ D FFR F M+ + +DI+ET+ EYIV+A++PGV K+D+K+T D VL IS E+KQE ++E+ H + YG +R+ +P A + D V+A +DGVLT+K+ K E++K ++I +K
Sbjct: 11 DLATEIFDLQREINRMFDRFFRGFEEEEELKMMKWSP---RVDISETDDEYIVRADVPGVSKDDIKITIKDNVLTISGEKKQEKETKNENF--HRIERVYGSFTRTFTLPGAVKVDKVEARFKDGVLTIKLPKVEEAKAKEIEVK 150
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|493465960|ref|WP_006421140.1| (Hsp20/alpha crystallin family protein [delta proteobacterium NaphS2] >gi|300446371|gb|EFK10223.1| Hsp20/alpha crystallin family protein [delta proteobacterium NaphS2]) HSP 1 Score: 98.2117 bits (243), Expect = 2.153e-22 Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 0
Query: 78 PWANLGRIFDDMGMEVFNDPFFRPFFARGP-GGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
PW+ G I + + D F FF P GG E + + LD++ET KE +V+AEL G+ +++++ HD VL + ERKQE ED+ H + +YG RSLR+P E D+VDA +DG+L +K+KK E + I IK
Sbjct: 8 PWSRPGDI---VTLRREMDSLFDRFFDWRPFGGGTEVSVWSPALDVSETPKEVLVRAELSGMDPKEIEINLHDNVLTVRGERKQEK--EDKEENYHRVERSYGSFVRSLRLPAEVESDNVDATYKDGILMIKLKKSEKIAQRKIEIK 149
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|1088667590|gb|OHE79031.1| (hypothetical protein A2107_03875 [Verrucomicrobia bacterium GWF2_62_7]) HSP 1 Score: 97.8265 bits (242), Expect = 2.664e-22 Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 0
Query: 78 PWANLGRIFDDMGMEVFNDPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPI 222
PW+ + + +++ +F D F + G A+ A LDIAETE E +VK E+PGV + D+ +T HDGVL + E+K A ED++ + H + AYG SRSL +P+ D + A +DGVLT+ + K E++KP+ I I
Sbjct: 8 PWSEMSGVQNEVN-RIFEDFFTH---SANEGNAI----FAPPLDIAETENEILVKVEVPGVAQSDIDITVHDGVLTVKGEKK--VAKEDKNLQWHRLERAYGSFSRSLTLPNTVSHDSIKAAYKDGVLTLSMAKREETKPRQIKI 142
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|522163375|ref|WP_020674583.1| (hypothetical protein [Geopsychrobacter electrodiphilus]) HSP 1 Score: 97.4413 bits (241), Expect = 3.390e-22 Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 0
Query: 120 LDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
+DIAET KE+++KAE+P VKKEDVKV +GVL IS ERKQE E+ R H + YG +RS +PD ++ V+A +DG+L + ++K E ++P+ I IK
Sbjct: 43 VDIAETSKEFLIKAEIPEVKKEDVKVNLENGVLTISGERKQEK--EESGKRFHRVERQYGSFTRSFTLPDNVDQSKVEATFKDGMLNIAIEKTEAARPKKIEIK 144
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|1125214713|gb|OLB64836.1| (heat-shock protein Hsp20 [Nitrospirae bacterium 13_2_20CM_2_61_4]) HSP 1 Score: 97.8265 bits (242), Expect = 3.634e-22 Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 0
Query: 89 MGMEVFNDPFFRPFFARGP-------GGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
M ++ P FF R P +M AE + +DI E +KEY++K ELP VKK+DVKVT +GVL I+ ERK E E++ + H + AYG RS +PD A+ + V+A +DGVL V V K E +KP+ I +K
Sbjct: 11 MDLDELESPL-STFFVRTPLRRQNGEQESMTIAEWSPLVDITEDDKEYLIKTELPEVKKDDVKVTVENGVLTITGERKFEK--EEKGRKYHRVERAYGNFVRSFTLPDDADANKVNAEFKDGVLKVHVAKSEAAKPKHIEVK 149
BLAST of EWM26760.1 vs. NCBI_GenBank
Match: gi|1200006066|ref|WP_087473801.1| (heat-shock protein Hsp20 [Nitrospira cf. moscoviensis SBR1015] >gi|1175911155|gb|OQW31987.1| heat-shock protein Hsp20 [Nitrospira sp. SG-bin2]) HSP 1 Score: 96.6709 bits (239), Expect = 7.473e-22 Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = 0
Query: 94 FNDPFFRPFFARGPGGAMEAAEVAMGLDIAETEKEYIVKAELPGVKKEDVKVTFHDGVLNISAERKQEAAGEDEHHRQHYSDFAYGKVSRSLRVPDAAEKDHVDAHLEDGVLTVKVKKGEDSKPQDIPIK 223
N F RP G + A+ +DI+E+E EY++KAELP VKKEDVKV+ DGVL +S ER+QE E++ + H + +YG RS +P++ ++ V A DGVL + + K E KP+ I +K
Sbjct: 19 LNRAFARPALRNGGKEHLTVADWVPTVDISESEGEYLIKAELPEVKKEDVKVSVEDGVLTLSGERRQEK--EEKGKKYHRVERSYGSFVRSFSLPESVDESGVKAQYTDGVLNLHLPKTEKVKPKSIEVK 146 The following BLAST results are available for this feature:
BLAST of EWM26760.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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