EWM30344.1, cds408 (CDS) Nannochloropsis gaditana

Overview
NameEWM30344.1
Unique Namecds408
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1012579..1012737 +
Alignment locationCM002455.1:1012865..1015213 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30344.1
Producte3 ubiquitin-protein ligase trim23
Orig transcript idgnl|cribi|Naga_100003g77.1861.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1012579..1012737 +
CM002455.1supercontigCM002455.1:1012865..1015213 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set
IPR017907Znf_RING_CS
IPR017868Filamin/ABP280_repeat-like
IPR013783Ig-like_fold
IPR013083Znf_RING/FYVE/PHD
IPR0110426-blade_b-propeller_TolB-like
IPR000315Znf_B-box
IPR001298Filamin/ABP280_rpt
IPR001841Znf_RING
Homology
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|585113003|gb|EWM30344.1| (e3 ubiquitin-protein ligase trim23 [Nannochloropsis gaditana])

HSP 1 Score: 1718.36 bits (4449), Expect = 0.000e+0
Identity = 835/835 (100.00%), Postives = 835/835 (100.00%), Query Frame = 0
Query:    1 MAAESGKVGKTRGLDCPICFESYGSSINVPMVLSCGHTLCENCVGKNRRAGEKVLCPFDSSLWTVTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPMEDAEFRKARPQPSCPFHGMPIEYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLERHDTNEARDLLMKRAFRKSVENTHLSMEPDALNDLEFVAREGTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVSIKVDKNLNPEWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTVPVRKDYNYVVDRSLQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQPYGMCVDGHLLYVCLYNTHYVGVYNKETGAQERMLGGPGVFMNPVGLAQEGEELFITEHVAHRLQVVRKDDGTPIRRLEDATLRSPFGLLLDEQHIYISSNTGNHVKVYSKGTLNLVHTVGESGGQFLQSPISLAQEDDILFVGCNGNNLVQLYRKGTFEALGTIHNVNQPYGACTHENFLYLCCMGVSAVTVLRPSFLDPSPHARKGPTVPFAPTGAGTLEGIAGGGGIGEAGVLGLGGVEFEDGTENGSDLERRRGGRDALLRGEGDGMMRAGSRGETGGRAAVRGHAGDGMVPALNAGPADHDLVDFGDGDY 835
            MAAESGKVGKTRGLDCPICFESYGSSINVPMVLSCGHTLCENCVGKNRRAGEKVLCPFDSSLWTVTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPMEDAEFRKARPQPSCPFHGMPIEYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLERHDTNEARDLLMKRAFRKSVENTHLSMEPDALNDLEFVAREGTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVSIKVDKNLNPEWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTVPVRKDYNYVVDRSLQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQPYGMCVDGHLLYVCLYNTHYVGVYNKETGAQERMLGGPGVFMNPVGLAQEGEELFITEHVAHRLQVVRKDDGTPIRRLEDATLRSPFGLLLDEQHIYISSNTGNHVKVYSKGTLNLVHTVGESGGQFLQSPISLAQEDDILFVGCNGNNLVQLYRKGTFEALGTIHNVNQPYGACTHENFLYLCCMGVSAVTVLRPSFLDPSPHARKGPTVPFAPTGAGTLEGIAGGGGIGEAGVLGLGGVEFEDGTENGSDLERRRGGRDALLRGEGDGMMRAGSRGETGGRAAVRGHAGDGMVPALNAGPADHDLVDFGDGDY
Sbjct:    1 MAAESGKVGKTRGLDCPICFESYGSSINVPMVLSCGHTLCENCVGKNRRAGEKVLCPFDSSLWTVTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPMEDAEFRKARPQPSCPFHGMPIEYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLERHDTNEARDLLMKRAFRKSVENTHLSMEPDALNDLEFVAREGTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVSIKVDKNLNPEWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTVPVRKDYNYVVDRSLQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQPYGMCVDGHLLYVCLYNTHYVGVYNKETGAQERMLGGPGVFMNPVGLAQEGEELFITEHVAHRLQVVRKDDGTPIRRLEDATLRSPFGLLLDEQHIYISSNTGNHVKVYSKGTLNLVHTVGESGGQFLQSPISLAQEDDILFVGCNGNNLVQLYRKGTFEALGTIHNVNQPYGACTHENFLYLCCMGVSAVTVLRPSFLDPSPHARKGPTVPFAPTGAGTLEGIAGGGGIGEAGVLGLGGVEFEDGTENGSDLERRRGGRDALLRGEGDGMMRAGSRGETGGRAAVRGHAGDGMVPALNAGPADHDLVDFGDGDY 835          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|1176067017|ref|XP_020603758.1| (E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata])

HSP 1 Score: 142.895 bits (359), Expect = 1.746e-31
Identity = 182/702 (25.93%), Postives = 296/702 (42.17%), Query Frame = 0
Query:    6 GKVGKTRGLDCPICFESYGSSINVPMVLSCGHTLCENCVGKNRRAGEKVLCPFDSSLWTVTKNFALLQILELEARP---GVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPMEDAEFRKARPQPSCP----FHGMPI-EYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLER--HDTNEARDLLMKRAFRKSVE--NTHLSM-EPDALNDLEFVAR-EGTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMK--FTVSARSRTSLPVTCGGERVSIKVD-KNLNP-EWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTV-------------------PVRKDYNYVVDRSLQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQ-------PYGMCVD--GHLLYVCLYNTHYVGVYNKETGAQERMLG----GPGVFMNPVGLAQEGE-ELFITEHVAHRLQVVRKDDGTPIRRL-----EDATLRSPFGLLLDEQHIYISSNTGN-HVKVYSKGTLNLVHTVGESG---GQF 647
             K+     L C IC E+Y +    P VL C H+ C+NC+  N R  ++ L      L         +    +EA P    ++   T  A      C  C  ED       AT  C+DC + LC      H R + T++H ++  E+ +  + +    CP     H   + +Y C   D  +C  C     H  H    + EA+      I+A L    + KI ++  A+    +    + ER  +V+  +++ +      LQ+Q  EL+ +++  + SK K+L++Q + L   L +L++  D  E      NEA  +L+K      ++  N H S  EP+    +EF +  E   +++  LG+V  S      + A GPG+     +A+ G K  FTV  + R   P T GG+ VS+K+   N +P    VED  +GTY   +   S     +   ++ V +  K IQGS F +                   P  K+ N   D   +  G+ +    D D +FV     N  ++V  ++G    +    G+       P G+CVD  GH +YV  +  H + V+  E G   R  G    G G    P GLA + E  + + E   HR+ +   +DG            +     P  + +D+    + S++GN  V+V+ K T   +  +GE G   GQF
Sbjct:    7 NKITDHYELTCGICNETYKN----PKVLPCLHSFCQNCLDSNIRPQDRTLVCSRCHL------VVPVPAKGIEAFPLNFFINNMLTVLAVQNPTKCTNC--EDSS----QATARCLDCVENLCTNCVFAHKRIRQTKDHRILTFEEIQANEVKDIIRCPSFCSVHPREVLKYFCETCDEAICRDCAIYE-HREHIYVDLKEAVKKYRSSITA-LQDRTKRKIPVLRAAVEEVHDVTRDLRERVEVVRDTIHNTIQNHIQELQEQERELIDQLESISNSKEKVLTSQQKILELDLSNLLSSCDFTENVLRYGNEAEIMLVKPQMVSRLQNLNEHESQCEPEDNEVVEFSSNDEQLSKVIAKLGQVTTSDVFPMLSCAEGPGL----SRAKVGHKSTFTVITKDRNGEPCTSGGDLVSVKLHCPNGSPITADVEDNDDGTYTASFTPVS-----KGDHQITVHVRGKPIQGSSFDLQVTAGIDCANIGPMMLKFTPTCKNTN---DEYFEPWGVTA----DPDGLFVVSDHHNHRLQVFDNSGHLLYQFGTRGKADGEIWYPAGVCVDKSGH-IYVADHGNHRIQVFTHE-GQFLRKFGSKGNGLGQLKGPCGLALDSEGRVIVAERDNHRIHIF-DNDGQATMHFGVYGEAEGKFNCPRHVAIDQDDNILVSDSGNSRVQVFDK-TGQFLERIGEKGNSNGQF 670          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|156402800|ref|XP_001639778.1| (predicted protein [Nematostella vectensis] >gi|156226908|gb|EDO47715.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 141.354 bits (355), Expect = 5.128e-31
Identity = 170/642 (26.48%), Postives = 289/642 (45.02%), Query Frame = 0
Query:   14 LDCPICFESYGSSINVPMVLSCGHTLCENCVGKNRRAGEKVL-CPF--------DSSLWTVTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPMED----AEFRKARPQP-SCPFHGMPI-EYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLE---RHDTNEARDLLMKR---AFRKSVENTHLSMEP--DALNDLEFVAREGTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMK--FTVSARSRTSLPVTCGGERVSIKVDKNLNPEWQ--VEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTVPVRKDYNY-VVDRSLQGIGLVSGGIIDGDYIF---VALYSQNQIVKVRRDTGAQEQRIPVNG-----------------QPYGMC--VDGHLLYVCLYNTHYVGVYNKETGAQERML------GGPGVFMNPVGLA-QEGEELFITEHVAHRLQVVRKDDGTPIRRL 598
            L CPIC E+Y +    P VL C HT C++C+    ++GE ++ CP            +  ++ NF +  +L+  +   V  +++K        C  C  ED  T    A+  CI+C ++LC+Q    H RTK T+EH ++ + +     E +    +P  C  H   + +Y C   D  VC +CL    H  HR   + + +  ++R     L+   + K+  +  A+    +T   +D +   ++ +V  +      V+Q++  ELL +V+     K K L  Q++ L  +L +L + +D  E   RH  NEA  +L+++   A  K +  T L  EP  D + D    A E  ++ +  +G V           A G G+     +A+ G++  F V+A+ R +   + GGE V + V+     E++  V D G+GTY V Y  N        + ++ V + +++I GSPF+V V    NY  + ++++  G  S G   G++     VA+  +N+   V      + Q    NG                  P G+    +GH++ V  +N H V ++N E G   R        G PG   +P G+A   G  + I+E   HR+Q+    +G PIR  
Sbjct:   14 LKCPICLETYRT----PKVLPCLHTFCQHCLKGMIQSGENIIVCPTCRCEVCVPKEGVSALSTNFFINNMLDFLS---VALSNSKPIF-----CTNC--EDRNT----ASSRCIECMEFLCEQCVAAHKRTKLTKEHEILALNELQGQPEVQDKLHRPLVCSVHDNEVLKYFCETCDEPVCRECLIID-HREHRYGYLKD-VDKKHRSEVGVLVMSTKKKLARLKEAIDKVTDTRKRLDCKAEEIRQEVMRHTQRCIEVIQEREQELLTQVNNIHRMKSKTLEIQSDDLDMMLGNLNSSIDFTENALRHG-NEAEVMLVRKQMTARLKDLNQTKLEYEPLEDEVIDYTLNADE-FRKAIERMGTVKVYHAYPRFCYASGVGI----QRAKIGLEAVFLVTAKDRMNEVFSGGGETVKVVVEPPEGDEYEGSVIDNGDGTYTVSYEPNQ-----RGNHKIIVTIRNRNIGGSPFSVNVTGRMNYKKLGKAIRTFG--SEGAGGGEFSIPWAVAIDEENECFIVTDCNNHRVQVFDFNGVFMFKFGCEGIDKGQFKNPKGIARLTNGHIV-VADFNNHRVQIFN-EDGRFLRKFGFYGTGGEPGSMNHPCGVACTPGGLILISEQDNHRIQMF-DVNGEPIRMF 619          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|1191051936|ref|XP_020903826.1| (E3 ubiquitin-protein ligase TRIM71-like [Exaiptasia pallida])

HSP 1 Score: 127.102 bits (318), Expect = 2.077e-26
Identity = 176/709 (24.82%), Postives = 294/709 (41.47%), Query Frame = 0
Query:   14 LDCPICFESYGSSINVPMVLSCGHTLCENCVGKNRRAGEKVL-CPF--------DSSLWTVTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPMEDAEFRKARPQPS------CPFHGMPI-EYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLE---RHDTNEARDLLMKRAFRKSVEN-THLSMEPDALNDLEFVARE----GTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMK--FTVSARSRTSLPVTCGGERVSIKVD--KNLNPEWQVEDVGNGTYEVEYRLNSDRLRDER-SFRLFVRLNSKDIQGSPFTVPV--RKDYNYVVDRSLQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQPYGMCVDGH--LLYVCLYNTHYVGVYNKETGAQERMLGGPGV----FMNPVGLAQ-EGEELFITEHVAHRLQVVRKDDGTPIRRL------EDATLRSPFGLLLDEQHIYISSNTGNHVKVYSKGTLNLVHTVGESG---GQFLQ-SPISLAQEDDILFVGCNGNNLVQLY 674
            L C IC E+Y S    P VL C HT C  C+ K  R  E+++ CP            +   + NF +  +L+      ++ A + +      NC     ED  T    AT  CI+C ++LC      H RTK T++H V+ +E+    K   Q        C  H   I +Y C   D  VC +CL    H  HR   + + +  ++R     L+   + K+  +  A+   +E    VD +   ++ ++         V+Q++  ELL +V+     K K L  QAE L  +L +L + +D  E   RH  NEA  +L+++     +++  H+ +E D L D EF+  E      +  +  +G V           A G G+     +A+ G++  F V+A+ R +   + GGE + + V   +    E +V D  +GTY V Y+       +ER +  + + L +++I GSP++V V  R DY                                ++ K+ R  G +         P+ + +D       +   N H V V++ E G      G  G     F NP G+A+    ++ I +   HR+Q+   +DG  IR+       E  ++  P G+      + + S   NH      G  + V   G  G   GQF+    + + Q   +    C  N+ VQ++
Sbjct:   14 LKCQICLETYKS----PKVLPCLHTFCLQCLIKLCRPEERIIICPTCRCESQIPKDGVTAFSSNFFINNMLDF-----LYVAQSSSKPVSCTNC-----EDKNT----ATSRCIECMEFLCQACVAAHHRTKLTKDHEVLALEELHGLKQEVQEKMHRPLLCGVHDTDILKYFCETCDEPVCRECLIID-HREHRYGYLKD-VDKKHRSEVGVLVMNTKKKLSPLKEAIDSVKEMRKRVDCKAEELRQEIMRTTKRCLEVIQEREEELLTQVNNIHKMKTKTLDIQAEELEMMLGNLTSSIDFTENALRH-GNEAEVMLVRKQMTARLQDLNHVKLEYDPLED-EFIDYELKPDEFRNAIQKMGTVKMYHAYPRFCYATGVGL----QRAKIGLEAVFLVTAKDRMNEIYSGGGEAMKVVVSPPEGDKYEGKVIDNLDGTYTVAYQ------PEERGTHEVAITLRNRNISGSPYSVNVTGRMDY-------------------------------GKLGKMMRTFGTEGTGGGEFNMPWAVAIDNDNGCFIITDCNNHRVQVFDFE-GNFMFKFGTEGCDRGQFKNPRGVARFPNGQIVIADFNNHRVQIF-NEDGRFIRKFGFYGNEEAGSMNHPCGVACAAGGMVLVSEQDNHRVQMFDGNGDPVRKFGCQGFGRGQFIYPHHLCVNQRGSVAVADC-VNDRVQIF 656          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|1005443924|ref|XP_015759298.1| (PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Acropora digitifera])

HSP 1 Score: 125.561 bits (314), Expect = 6.362e-26
Identity = 166/703 (23.61%), Postives = 297/703 (42.25%), Query Frame = 0
Query:   14 LDCPICFESYGSSINVPMVLSCGHTLCENCVGK--NRRAGEKVLCPF--------DSSLWTVTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPM------EDAEFRKARPQPSCPFHGMP-IEYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESL---VNGVDHLERHDTNEARDLLMKRAFRKSVENTHLSMEPDALNDLEFVAREGTQEMLG-SLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVSIKVDK--NLNPEWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTVPV--RKDYNYVVDRSLQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQPYGMCVDGH-LLYVCLYNTHYVGVYNKETGAQERMLGG----PGVFMNPVGLAQEGE-ELFITEHVAHRLQVVRKDDGTPIRRLEDAT----LRSPFGLLLDEQHIYISSNTGNH-VKVYSK--GTLNLVHTVGESGGQFLQSPISLA--QEDDILFVGCNGNNLVQLYRK 676
            L C IC +   S    PM L C HT C  C+ +  N      + CP         +  +  +  NF + Q+L+L     V + + +    E + C  C   D       AT  C+DC + LC      H R   T +H ++        +D +         C +H    I+Y C   D  +C  C     H  H+     EAL  E R   ADL+Q+ + ++  + R L    E    + E +  +  +++         L++ +N+LLK++D+   +K K+L  Q +++   L  L       D++ +   NE   L MK    +++ +  ++ EP+  + +++V    T +++  SLG +  S   A  + A G G+   +++ +   K T   R         GG+RV++ + +    N    V+D G+GTY V Y    +   +     + V +  K I GSPFTV V  R++Y+ V      G  L+  G                        G++++       P+G+ VD    +YV     H + ++    G      G      G F  P  +A + +  + + ++  +R+QV+ ++ G   +   + T     +SP+G+  + ++  + ++  NH V+++S     L  + + G+  GQF  SP  L    EDD LFV  + N+ +Q + K
Sbjct:   15 LMCAICLDRLTS----PMFLQCLHTFCSQCLHRIANNDPVPVITCPTCRAETVLPEKGVDHLMPNFFVNQMLDL---VHVKSEELRREIRENKKCAAC---DNIKTADFATSRCVDCNKDLCTSCVAEHKRAHATLDHRIIATNEEDDGQDIQELDKYCLSFCKYHTRNVIKYFCNTCDEAICRVCTILE-HREHQYVYPKEALP-ERRGAIADLLQQAKARMPQLRRTLAEVREMSKRLTECKEAITKEISENTQSRIEALREGQNDLLKQLDDIHIAKQKVLCLQKDSIELELGKLSGCCEFADNVMKFG-NEVEILQMKGRL-ETLNDVKVNFEPEEDDTIQYVNDPATTKIVSESLGNIRASSTFASISFASGDGIHTARVKMETTFKLTTKDRHGQRQQ---GGDRVTVDITQPDGSNLPASVKDEGDGTYTVHYTPEVNGKHE-----VAVAIQDKPIMGSPFTVLVINRREYSDV------GPTLLRFG----------------------QYGSKKREFK---SPFGVAVDEESYIYVADSYNHRIQIFGPR-GEYVTQFGSHGERKGEFNCPTDVAIDSKGRVVVCDNGNNRVQVLSRNGGFIGKFGREGTGNGFFKSPWGVATNRKNDILVADMENHRVQMFSPEGKFLTKIGSFGDRVGQF-NSPCYLLVNPEDDHLFVSDSKNHRIQEFDK 662          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|1126222972|ref|XP_019645776.1| (PREDICTED: tripartite motif-containing protein 2-like [Branchiostoma belcheri])

HSP 1 Score: 123.635 bits (309), Expect = 2.557e-25
Identity = 168/733 (22.92%), Postives = 300/733 (40.93%), Query Frame = 0
Query:   14 LDCPICFESYGSSINVPMVLSCGHTLCENCV---GKNRRAGEKVLCPFDSSLWT-----VTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPME-----DAEFRKARPQPSCPFHGMPIEYLCLEDDCLVCVKCL-----PCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNG-------VDHLERHDTNEARDLLMKRAFRKSVENTHLSMEPDALNDLEFVAREGTQEM------LGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVSIKVDKNLNPEWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTVPVRKDYNYVVDRSLQGIG-----LVSGGIIDGDYIFVALYSQNQIVKV-RRDTGAQEQRIPVNGQ-PYGMCVD--GHLLYVCLYNTHYVGVYNKETGAQERMLGGPGVFMNPVGLAQEGEELFITEHVAHRLQVVRKDDGTPIRRLEDATLRSPFGLLLDEQH--IYISSNTGNHVKVYS-KGTLNLVHTVGESG---GQFLQSP--ISLAQEDDILFVGCNGNNLVQLYR-KGTFEALGTIHNVNQPYGACTH 697
            L C +C   +      P +L C HT C+ C+      ++  E  +C    SL       +  NF +  +L+  A         K  A     C +C G      +  +  +C DC   LC+    +H +   TR+H +VP +     D   R  R +         + + C   + LVC  C      P   HN      I    A + +    +L+Q+   ++  V  ++   ++ +  +   +     Q  +Y  +L  +L+++  E+L+++DE   +  K L A+ EA+   L  L +        V+H       E  + +  R   +S+    L +E +  N+ +F+      +       LG LG V +   C        P V  +Q  A   +  T++   R S+  +    + ++K     + + Q++      +E+ Y       +   + RL V++NSK++ GSPF + V+  +  V+    QG G     + +G ++D D     +  +N+ V++   +TG   +  PV G+ PY + VD  G  L     N + V  Y+KE          PG    P+G+    +   +   ++ +   + + DG+ IR +    L+ P    +DE    I+++  T N V V+  +G      + GE G   GQF +SP  I+L +  +I+ V       VQ++R  GTF     I  V    G C H
Sbjct:   15 LTCQVCMLHFRD----PKILPCLHTFCKVCLEEWATKQQPLECSICRIPVSLLEQGVDGLKTNFYVNNLLDFVA--------AKKGAEPGVPCQVCEGN-----VEGSKSWCADCGVLLCESCTAMHRKIPGTRDHELVPQDVMTAKDGADRFQRKRHCDKHKNQELVFYCESCNALVCTACTVIDHRPGKDHNPVEITTI----AQKKKEKLQELLQDMDPRLKEVQASIDEVDKNMSKLIPSKEEATTQAKAYFRQLADLLEKREEEILRQIDEQCRADGKALQAKKEAIEFELAGLTSAQTFCQQAVEHGSDVHVLEVGNQVQTRV--ESLLAKELDLESN-WNEFQFIESTSVADFAEKVKNLGDLGSVIDVTKCQ---VVVKPAVEGFQCIA---VLTTLNQIGRPSVTESIAA-KANMKDPSGASLQTQLQMTSGAVWEISYVP-----KVTGNHRLEVKVNSKEVAGSPFDIEVQSRHTPVLTMGQQGSGVGELDMPAGVVVDQDGNIAVVEQRNKRVQIFDLNTGHSLRTFPVEGKLPYDIDVDSYGRFLVTSFGNNYRVRCYSKEGKLLNTF--SPGCMKQPLGITVLKDGRMVVADISEQSCFLLQYDGSLIREIGKGKLQKPRFTAVDESRGMIFVTDYTFNKVFVFDLEGEFKF--SFGEKGEGEGQF-RSPMGITLDRAGNIIVVNYESGR-VQVFRPDGTF-----IRTVMTVKGKCPH 700          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|926647599|ref|XP_013790184.1| (PREDICTED: tripartite motif-containing protein 2-like [Limulus polyphemus])

HSP 1 Score: 123.25 bits (308), Expect = 3.676e-25
Identity = 115/480 (23.96%), Postives = 205/480 (42.71%), Query Frame = 0
Query:   11 TRGLDCPICFESYGSSINVPMVLSCGHTLCENCVGKNRRAGEKVL-CPF--------DSSLWTVTKNFALLQILELEARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVP------MEDAEFRKARPQPSCPFH-GMPIEYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLER---HDTNEARDLLMKRAFRKSVENTHLSME--PDALNDLEFVAREGTQ--EMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVSIKVDKNLNPEWQVEDV------GNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTV 461
            ++ L C IC + Y +    P VL C HT CE+C+     A    L CP         +  +  +  NF +L ++E+  +P                C +C   D +      T  CI C Q+LCD  +R+H +  +T EH V+       +E+ E  K  P   CP H    + + C E +  +CV C     H GH    + EA+ +E + +  +L+++   +I  +  A+         + ++   +   +   +D +  ++Q +++ LL  ++E    K ++L  Q E L   +  L N  +  E    H ++    L+ K+   K  E + +S++  P+  + + F   E T+  + L + G++  +   A+ TTA G G+   Q    K     V  + R    V  G       +    +PE  V  +       NG+Y+  Y ++      E  ++L ++L  K I+GSPF V
Sbjct:   20 SQFLKCGICLDRYTN----PKVLPCLHTFCEDCLLNYIPAESLTLTCPLCRQQSILPEQGVSGLQNNFFILNLMEILGQPTA--------------CQVC---DSQV---PGTFKCIVCNQFLCDPCSRIHQKEMSTSEHKVISLNELALLEEHEMSKDHPSLMCPKHQSQTLRFYCRECETAICVTCTDIE-HGGHDTTRMREAV-EEQKAVLKNLVEKAYSQIPALKEAMDSVNALSFILSDKHSEISKNICYTLDSVTELIQLRKSFLLNELEECHRLKQQVLQEQKEYLEFCISDLTNSCEFTENALTHGSDTEIFLVNKQMAEKISEFSEMSVQNMPEENDYMVFEGAELTEVKKSLNNFGKILTNSAVAYETTASGEGL--KQCVVGKQTLVNVVLKDRCGDIVKDGNMLFETDIS---SPELSVSLIPEIFYQKNGSYDFVYSISK-----EGVYKLTIKLFGKHIKGSPFEV 463          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|260792746|ref|XP_002591375.1| (hypothetical protein BRAFLDRAFT_227502 [Branchiostoma floridae] >gi|229276580|gb|EEN47386.1| hypothetical protein BRAFLDRAFT_227502, partial [Branchiostoma floridae])

HSP 1 Score: 121.324 bits (303), Expect = 5.253e-25
Identity = 101/352 (28.69%), Postives = 157/352 (44.60%), Query Frame = 0
Query:   14 LDCPICFESYG-SSINVPMVLSCGHTLCENCVGKNRRAGEKVLCPF--------DSSLWTVTKNFALLQILEL----EARPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCDQAARLHGRTKTTREHAVVPMEDAEFRKARPQPSCPFHGM-PIEYLCLEDDC----LVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALR----------------------VAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLERHDTNEARDLLMKRAFRKSVENT 325
            L+C +C + +G     VP +L CGHTLC +C+ +    G  + CPF        DS +W + KNFALL++LE        PG  A   + +   ++   I C E+ +   H AT+YC  C   LC + A+    T+T  +H +VP+ +    K R +P CP H    IE++CLE+ C    L+C  C     H GH+   + E  A++ R+   D +Q  +G +D VS + R                         E I G  E  R+   +V  Y  EL   L +Q N  L  VD     KL  L  Q E +  ++  +       E+    +   +L+ +   +S+ +T
Sbjct:    4 LECGVCEDVFGLQGDKVPRLLLCGHTLCHDCLTRLPLHGRAIRCPFDRQMTEIGDSGVWGLKKNFALLELLERLQFGRESPG--ALLCEVSMDTEKETTIRCDENED---HLATIYCTVCSTNLCAECAQSTHNTRTLAKHKLVPLHE----KPREKPMCPLHQTHAIEFVCLEESCLCNPLMCYVCKDYEKHQGHK-HTLIENDAEQVRISIIDTLQHVKGFLDGVSDSARRLGNAIQQMEGCSRTVENEHGFTHTEQIHGTAEEARV---RVRRYFQELHETLHRQENVALSVVDTHVREKLCSLKQQQEDMAVVVSQVTTICLECEKMLQQDDHKVLLAKQEIRSLLDT 342          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|961079367|ref|XP_014767946.1| (PREDICTED: tripartite motif-containing protein 2-like isoform X1 [Octopus bimaculoides])

HSP 1 Score: 122.479 bits (306), Expect = 6.048e-25
Identity = 159/709 (22.43%), Postives = 294/709 (41.47%), Query Frame = 0
Query:   14 LDCPICFESYGSSINVPMVLSCGHTLCENC-VGKNRRAGEKVLCPFDSSLWTVTKNFALLQILELEA-RPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCD---------QAARLHGRTK----TTREHAVVPM------EDAEFRKARPQPSCPFH-GMPIEYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLERHDTN--EARDLLMKRAFRKSVE---NTHLSMEPDALNDLEFVAR--EGTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVS---IKVDKNLNPEWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTV---PVRKDYNYVVDRS---------LQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQPYGMC-VDGHLLYVCLYNTHYVGVYNKETGAQERMLG---GPGVFMNPVGLAQEGEELFITEHVAHRLQVVRKDDGTPIRRLEDATLRSPFGLLLDEQ-HIYISSNTGNHVKVYSKGTLNLVHTVGESGGQFLQSPISLAQEDDIL----FVGCNGNN 669
            L C IC + Y +    P VL C HT CE+C +         + CP       + +  ++L +  + A +      +     G+   C  C           AT  C +C+ +LC          QA+R  G        T  H ++ +      ED E R       CP H G  +++ C   +   C +C    +H GH+   + +A+  E++     LI   R +I  + ++++  EE  + ++ + R  + ++ S  D L+ ++ QQ+  LLK + E  TSK  +LS Q E L   L  + N  +  E   T+  E   L++K+   + ++   +  ++ +P+    LEF +   +  ++ + +LG +  +    + TTA G G L Y     K    +V+ + R    V  G   V    + ++K++  E  + D  NGTY++ Y      +  E ++ +F+++ ++ I+GSPF V   P  ++ + +   +          +G    S     G      +   + I+KV    G + +       P G+  ++G +L V   N   V V++     + R      GPG    P GLA      ++     ++   V   DG  I ++ +  L  P G+ +D+  HI +  N  + + ++            +S G+ +Q   S   +D+      +V  N NN
Sbjct:   46 LSCGICLDRYQN----PKVLPCLHTFCEHCLISYIPPESLSLTCP-------ICRQQSILPVEGVSAMQTNFFITNLMDVLGQTNVCTACVDNT------KATCKCTNCDNFLCQRCSESSCGGQASRDQGSETPNEMATSVHNIIRLSELALTEDKENRLV-----CPSHEGRSLQFYCCACETAACEECTA--VHVGHKTIPLQDAIK-EHKAGLQRLISGARAQIPGIQKSVKEVEEVSEKLNHKLREAEDEIVSAFDVLDKLIVQQKTTLLKELSEVHTSKQMVLSKQKETLESTLSRISNCCEVTEEALTHGKETAILVVKKEVTEKLQELGSMSINYQPEENEFLEFDSSCFQSLKKSIVNLGHILTNSAVGYETTATGNG-LKYSYIG-KYSTVSVTTKDRKGELVKLGNATVEAELLSLNKDIIVEPHITDHKNGTYDITY-----SIPKEGTYEMFIKVFNQPIKGSPFKVKALPAGEESDLLGASTRIPKTSAVKQRGTKRPSSSRSHGSNRKSNVIEDDLILKV----GVKGRNKGEFTNPQGLTSINGKIL-VADSNNQVVQVFSSLGDCKLRFGSPGRGPGKMQRPTGLAVTMNGNYLVADYDNKWVSVFSPDGKYINKIGNNKLLGPKGVAVDKNGHIIVVDNKASCIFIF------------QSNGKLIQKFGSRGNDDNQFAGPHYVAINANN 705          
BLAST of EWM30344.1 vs. NCBI_GenBank
Match: gi|961079370|ref|XP_014767947.1| (PREDICTED: tripartite motif-containing protein 2-like isoform X2 [Octopus bimaculoides] >gi|918330969|gb|KOF94784.1| hypothetical protein OCBIM_22000742mg [Octopus bimaculoides])

HSP 1 Score: 122.094 bits (305), Expect = 7.606e-25
Identity = 159/709 (22.43%), Postives = 294/709 (41.47%), Query Frame = 0
Query:   14 LDCPICFESYGSSINVPMVLSCGHTLCENC-VGKNRRAGEKVLCPFDSSLWTVTKNFALLQILELEA-RPGVHAADTKAAAGEQQNCDICCGEDGETILHDATVYCIDCEQYLCD---------QAARLHGRTK----TTREHAVVPM------EDAEFRKARPQPSCPFH-GMPIEYLCLEDDCLVCVKCLPCPIHNGHRCKAIPEALADENRMISADLIQEGRGKIDLVSRALRVAEETIDGVDERQRLVKGQVNSYVDELEAVLQQQRNELLKRVDETTTSKLKILSAQAEALRCILESLVNGVDHLERHDTN--EARDLLMKRAFRKSVE---NTHLSMEPDALNDLEFVAR--EGTQEMLGSLGEVAESGPCAFNTTAGGPGVLAYQMQAQKGMKFTVSARSRTSLPVTCGGERVS---IKVDKNLNPEWQVEDVGNGTYEVEYRLNSDRLRDERSFRLFVRLNSKDIQGSPFTV---PVRKDYNYVVDRS---------LQGIGLVSGGIIDGDYIFVALYSQNQIVKVRRDTGAQEQRIPVNGQPYGMC-VDGHLLYVCLYNTHYVGVYNKETGAQERMLG---GPGVFMNPVGLAQEGEELFITEHVAHRLQVVRKDDGTPIRRLEDATLRSPFGLLLDEQ-HIYISSNTGNHVKVYSKGTLNLVHTVGESGGQFLQSPISLAQEDDIL----FVGCNGNN 669
            L C IC + Y +    P VL C HT CE+C +         + CP       + +  ++L +  + A +      +     G+   C  C           AT  C +C+ +LC          QA+R  G        T  H ++ +      ED E R       CP H G  +++ C   +   C +C    +H GH+   + +A+  E++     LI   R +I  + ++++  EE  + ++ + R  + ++ S  D L+ ++ QQ+  LLK + E  TSK  +LS Q E L   L  + N  +  E   T+  E   L++K+   + ++   +  ++ +P+    LEF +   +  ++ + +LG +  +    + TTA G G L Y     K    +V+ + R    V  G   V    + ++K++  E  + D  NGTY++ Y      +  E ++ +F+++ ++ I+GSPF V   P  ++ + +   +          +G    S     G      +   + I+KV    G + +       P G+  ++G +L V   N   V V++     + R      GPG    P GLA      ++     ++   V   DG  I ++ +  L  P G+ +D+  HI +  N  + + ++            +S G+ +Q   S   +D+      +V  N NN
Sbjct:   39 LSCGICLDRYQN----PKVLPCLHTFCEHCLISYIPPESLSLTCP-------ICRQQSILPVEGVSAMQTNFFITNLMDVLGQTNVCTACVDNT------KATCKCTNCDNFLCQRCSESSCGGQASRDQGSETPNEMATSVHNIIRLSELALTEDKENRLV-----CPSHEGRSLQFYCCACETAACEECTA--VHVGHKTIPLQDAI-KEHKAGLQRLISGARAQIPGIQKSVKEVEEVSEKLNHKLREAEDEIVSAFDVLDKLIVQQKTTLLKELSEVHTSKQMVLSKQKETLESTLSRISNCCEVTEEALTHGKETAILVVKKEVTEKLQELGSMSINYQPEENEFLEFDSSCFQSLKKSIVNLGHILTNSAVGYETTATGNG-LKYSYIG-KYSTVSVTTKDRKGELVKLGNATVEAELLSLNKDIIVEPHITDHKNGTYDITY-----SIPKEGTYEMFIKVFNQPIKGSPFKVKALPAGEESDLLGASTRIPKTSAVKQRGTKRPSSSRSHGSNRKSNVIEDDLILKV----GVKGRNKGEFTNPQGLTSINGKIL-VADSNNQVVQVFSSLGDCKLRFGSPGRGPGKMQRPTGLAVTMNGNYLVADYDNKWVSVFSPDGKYINKIGNNKLLGPKGVAVDKNGHIIVVDNKASCIFIF------------QSNGKLIQKFGSRGNDDNQFAGPHYVAINANN 698          
The following BLAST results are available for this feature:
BLAST of EWM30344.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113003|gb|EWM30344.1|0.000e+0100.00e3 ubiquitin-protein ligase trim23 [Nannochloropsi... [more]
gi|1176067017|ref|XP_020603758.1|1.746e-3125.93E3 ubiquitin-protein ligase TRIM71-like [Orbicella... [more]
gi|156402800|ref|XP_001639778.1|5.128e-3126.48predicted protein [Nematostella vectensis] >gi|156... [more]
gi|1191051936|ref|XP_020903826.1|2.077e-2624.82E3 ubiquitin-protein ligase TRIM71-like [Exaiptasi... [more]
gi|1005443924|ref|XP_015759298.1|6.362e-2623.61PREDICTED: E3 ubiquitin-protein ligase TRIM71-like... [more]
gi|1126222972|ref|XP_019645776.1|2.557e-2522.92PREDICTED: tripartite motif-containing protein 2-l... [more]
gi|926647599|ref|XP_013790184.1|3.676e-2523.96PREDICTED: tripartite motif-containing protein 2-l... [more]
gi|260792746|ref|XP_002591375.1|5.253e-2528.69hypothetical protein BRAFLDRAFT_227502 [Branchiost... [more]
gi|961079367|ref|XP_014767946.1|6.048e-2522.43PREDICTED: tripartite motif-containing protein 2-l... [more]
gi|961079370|ref|XP_014767947.1|7.606e-2522.43PREDICTED: tripartite motif-containing protein 2-l... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna408rna408Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications