EWM26689.1, cds4065 (CDS) Nannochloropsis gaditana

Overview
NameEWM26689.1
Unique Namecds4065
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:793337..798160 +
Alignment locationCM002462.1:798285..798458 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26689.1
Productpentatricopeptide repeat-containing protein mitochondrial
Orig transcript idgnl|cribi|Naga_100001g37.8200.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:793337..798160 +
CM002462.1supercontigCM002462.1:798285..798458 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR002885Pentatricopeptide_repeat
Homology
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|585108777|gb|EWM26689.1| (pentatricopeptide repeat-containing protein mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 3430.96 bits (8895), Expect = 0.000e+0
Identity = 1665/1665 (100.00%), Postives = 1665/1665 (100.00%), Query Frame = 0
Query:    1 MQRCFVRHHYGVKLLLRRTAKVSSCPGLSRGWHVSSPATLPPPLGTNQRAYFSSTPLALGGTPPHAPETNLDALEVLKKQKNAVSSLAWLRSIRSALSPEAYYKVLEISREACDAHSALGVLSLMKSQGQHLDVKACTIAIEVCARAGDIDNAERVLSEMKASGLKCSPVNYHHIIHACRRQRNGTKALHMLDHMAIDGLAPDRKAYVHVLGACGAQSLMSEAETLLHRITNEDLKGSVEVDQELCSSLVVGAAENGRRKGWAGSWRAWEVVREHRTGLTAIAFKALRSSLTRTGQYERLLDLCRDLQGALDSSGRSQGLSTASQSAEDVATTGIEACLHLEDHAELKKCVQKRLRQGAFHAIVYQEALSAWLALGRWDEMLRLYRDGQEGEAWEDDYLLLSIMATGAARLSKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERINALREGKANERASQRTGLPDSDGRHFQDSKRSGIQKLLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERPSAAACFAVMRLCSIKQAWQTGLDVVERVAQCPELSRAMGRDLHTARVSFCAHLNDIAGCRVALREMRKEGFLPDEKVYGWALKCEATRPRNVGGVGELLVQAKEDGVMLTPDVLKAQMATLRQSGNWRGAVQLLDRMVALREQQLQNEEQDGQASQRVVRGTDADYGPQISQVTEISTHIFNDVLATLAQGKEWYQILELQGNMLEKHGVVPDNVSFLYRLQALSETKDWKQALAVLDEIRIGAHGPPVFAQDSMYTVILSGGALDRQPKEIEGLVMRWEEDSRPYTRHFLNALIGAYGRGGQLAKAVDTFNKIPTHLNGAEPDIVAFNALLVAQRLAATPLDEGALPLYRELLSRAPSGLAPDGWTYTSLIVACEAKGAWPVAMYLYDDSAFTLPRAGGAPAAASRASEGEGLEDVVKDAHFKAAEDARGLGWKDPSRTEVHSVWEKSETGTWMGVDVTAGAEYRHPIAGARDAKSNSARFESLKTLMSCLEKLNIGLFIEKLYRDAYQQGVFSPWSQTEGNGRVMDLHHFSCPLATVAIRYALLEFESEQLEQRRLPWGKRKKSMSPWVIIVGQGLKRKSGSGALKKEVLRIFAGLDPPLQADVDKRNTGRLIVPASRIKAYTTARIERGKHTCTREALGAHTLLHKILGNECVHYSQNNLSPSCFGARGLFILLAACQKGSLLKGHPECT 1665
            MQRCFVRHHYGVKLLLRRTAKVSSCPGLSRGWHVSSPATLPPPLGTNQRAYFSSTPLALGGTPPHAPETNLDALEVLKKQKNAVSSLAWLRSIRSALSPEAYYKVLEISREACDAHSALGVLSLMKSQGQHLDVKACTIAIEVCARAGDIDNAERVLSEMKASGLKCSPVNYHHIIHACRRQRNGTKALHMLDHMAIDGLAPDRKAYVHVLGACGAQSLMSEAETLLHRITNEDLKGSVEVDQELCSSLVVGAAENGRRKGWAGSWRAWEVVREHRTGLTAIAFKALRSSLTRTGQYERLLDLCRDLQGALDSSGRSQGLSTASQSAEDVATTGIEACLHLEDHAELKKCVQKRLRQGAFHAIVYQEALSAWLALGRWDEMLRLYRDGQEGEAWEDDYLLLSIMATGAARLSKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERINALREGKANERASQRTGLPDSDGRHFQDSKRSGIQKLLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERPSAAACFAVMRLCSIKQAWQTGLDVVERVAQCPELSRAMGRDLHTARVSFCAHLNDIAGCRVALREMRKEGFLPDEKVYGWALKCEATRPRNVGGVGELLVQAKEDGVMLTPDVLKAQMATLRQSGNWRGAVQLLDRMVALREQQLQNEEQDGQASQRVVRGTDADYGPQISQVTEISTHIFNDVLATLAQGKEWYQILELQGNMLEKHGVVPDNVSFLYRLQALSETKDWKQALAVLDEIRIGAHGPPVFAQDSMYTVILSGGALDRQPKEIEGLVMRWEEDSRPYTRHFLNALIGAYGRGGQLAKAVDTFNKIPTHLNGAEPDIVAFNALLVAQRLAATPLDEGALPLYRELLSRAPSGLAPDGWTYTSLIVACEAKGAWPVAMYLYDDSAFTLPRAGGAPAAASRASEGEGLEDVVKDAHFKAAEDARGLGWKDPSRTEVHSVWEKSETGTWMGVDVTAGAEYRHPIAGARDAKSNSARFESLKTLMSCLEKLNIGLFIEKLYRDAYQQGVFSPWSQTEGNGRVMDLHHFSCPLATVAIRYALLEFESEQLEQRRLPWGKRKKSMSPWVIIVGQGLKRKSGSGALKKEVLRIFAGLDPPLQADVDKRNTGRLIVPASRIKAYTTARIERGKHTCTREALGAHTLLHKILGNECVHYSQNNLSPSCFGARGLFILLAACQKGSLLKGHPECT
Sbjct:    1 MQRCFVRHHYGVKLLLRRTAKVSSCPGLSRGWHVSSPATLPPPLGTNQRAYFSSTPLALGGTPPHAPETNLDALEVLKKQKNAVSSLAWLRSIRSALSPEAYYKVLEISREACDAHSALGVLSLMKSQGQHLDVKACTIAIEVCARAGDIDNAERVLSEMKASGLKCSPVNYHHIIHACRRQRNGTKALHMLDHMAIDGLAPDRKAYVHVLGACGAQSLMSEAETLLHRITNEDLKGSVEVDQELCSSLVVGAAENGRRKGWAGSWRAWEVVREHRTGLTAIAFKALRSSLTRTGQYERLLDLCRDLQGALDSSGRSQGLSTASQSAEDVATTGIEACLHLEDHAELKKCVQKRLRQGAFHAIVYQEALSAWLALGRWDEMLRLYRDGQEGEAWEDDYLLLSIMATGAARLSKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERINALREGKANERASQRTGLPDSDGRHFQDSKRSGIQKLLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERPSAAACFAVMRLCSIKQAWQTGLDVVERVAQCPELSRAMGRDLHTARVSFCAHLNDIAGCRVALREMRKEGFLPDEKVYGWALKCEATRPRNVGGVGELLVQAKEDGVMLTPDVLKAQMATLRQSGNWRGAVQLLDRMVALREQQLQNEEQDGQASQRVVRGTDADYGPQISQVTEISTHIFNDVLATLAQGKEWYQILELQGNMLEKHGVVPDNVSFLYRLQALSETKDWKQALAVLDEIRIGAHGPPVFAQDSMYTVILSGGALDRQPKEIEGLVMRWEEDSRPYTRHFLNALIGAYGRGGQLAKAVDTFNKIPTHLNGAEPDIVAFNALLVAQRLAATPLDEGALPLYRELLSRAPSGLAPDGWTYTSLIVACEAKGAWPVAMYLYDDSAFTLPRAGGAPAAASRASEGEGLEDVVKDAHFKAAEDARGLGWKDPSRTEVHSVWEKSETGTWMGVDVTAGAEYRHPIAGARDAKSNSARFESLKTLMSCLEKLNIGLFIEKLYRDAYQQGVFSPWSQTEGNGRVMDLHHFSCPLATVAIRYALLEFESEQLEQRRLPWGKRKKSMSPWVIIVGQGLKRKSGSGALKKEVLRIFAGLDPPLQADVDKRNTGRLIVPASRIKAYTTARIERGKHTCTREALGAHTLLHKILGNECVHYSQNNLSPSCFGARGLFILLAACQKGSLLKGHPECT 1665          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|553196627|ref|XP_005856386.1| (pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292671|gb|EKU19973.1| pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 755.747 bits (1950), Expect = 0.000e+0
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query:  412 SKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVD 777
            SKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVD
Sbjct:    1 SKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVD 366          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|1040877147|ref|XP_017248819.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Daucus carota subsp. sativus] >gi|1040877149|ref|XP_017248820.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Daucus carota subsp. sativus] >gi|1040877151|ref|XP_017248821.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Daucus carota subsp. sativus] >gi|1040877153|ref|XP_017248822.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g74580 [Daucus carota subsp. sativus] >gi|1021035518|gb|KZM93301.1| hypothetical protein DCAR_016546 [Daucus carota subsp. sativus])

HSP 1 Score: 120.168 bits (300), Expect = 9.834e-24
Identity = 145/630 (23.02%), Postives = 256/630 (40.63%), Query Frame = 0
Query:  536 AFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHIT----GHVPHASP------RLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGW------DSHTYGVMLKALAGLKKDDEMKGLFWERINALREGKANERASQRTGLPDSDGRHFQDSKRSGIQKLLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERPSAAACFAVMRLCSIKQAWQTGLDVVERVAQCPELSRAMGRDLHTARV---SFCAHLNDIAGCRVALREMRKE---GFLPDEKVYGWALKCEATRPRNVGGVGEL--------------LVQAKEDGVMLTPDVLKAQMATLRQSGNWRGAVQLLDRMVALREQQLQNEEQDGQASQR 1129
             F +++    K GN+  ++ LL ++  RG+ P+  ++N  +  ++R G + +A  + + +  A               G  P  V YNT++  L K G   +A+  +  M       PD  +YNT+++A         A     + M K  K  PDE TY +L++       GY +  D E  +       V    P       L K +    + LQ L L  ++   +G  PN+  +N++++  CK G V DA +LV  AM +    PD  T+NTL  GY +  +   A+++        VN  W      D  TY  +L  L    K  ++  +F    NA+ E         +  +P+                L+E +  A    G +D    L++++E+    P            SF   +       DLEGA +L + +E++ +    AA F +M + +  +  +  LD+VE++     +S+    D +T R     FC     +    VA R + K    GF+P    +G  + C   + R    VG +               +   +  V+  P ++   +  LR+S     A +LL   +  ++Q+++N+   G   +R
Sbjct:  218 TFNKLLHTLCKKGNVRGSERLLDKVFKRGVSPNLFTFNIFVQGFSRRGLIHEASRIMDGVTKA---------------GLCPDLVTYNTLICGLCKNGKVVEAECYLHQMV-NMGYEPDAFTYNTIISAYCKLSRATDADKILNDAMYKGFK--PDEFTYCSLIN-------GYCQEGDIERSVNVFKQALVKGLQPTIIIYNTLIKGLSQQGLILQALELMTEMP-EKGCDPNVWTYNLVINGLCKMGCVSDASNLVNDAMAK-GVLPDIFTFNTLIDGYCKQLKMSNAIEL--------VNSMWEHGIVPDVITYNTVLNGLCKTGKSADVIEMF----NAMME---------KGFVPNI----------ITYNTLIESLCKARNLGGALD----LLKDMESNGLTPD---------IISFGTLISGYSENGDLEGAYKLFQRIEKQYKFCHTAATFNIM-INAFSEKLK--LDMVEKLYH-EMISKGYSPDKYTYRCLIDGFCK----VGNIDVAYRYLLKNIDAGFIPSLTTFGRVINCLCVKNRVHEAVGLIRTMVSMGIVPDAVNTIFEADKRVVAAPKIVVEDL--LRKSHITYYAYELLHDGLRDKKQKMENDPNKGSKKRR 766          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|1023176429|pdb|5I9F|A (Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U10 In Complex With Its Target Rna U10)

HSP 1 Score: 116.316 bits (290), Expect = 2.052e-23
Identity = 120/454 (26.43%), Postives = 190/454 (41.85%), Query Frame = 0
Query:  536 AFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICR---ESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERI-----------NALREGKANERASQRTGLPDSDGRHFQDSKRSGIQK---LLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERP 972
            A+  V+ A  +AG  E A +L   L  +G+ P+  +YN L+    + G++ +A  LFE M   G                 P  V YNT++  L K G  ++A  L   M   +   PD+V+YNT++     A     A   F EEMV+K  ++PD VTY TL+                              L K    DE     L LF+++   +G  P+++ +N ++D  CK G +D+A  L    M     +PD VTYNTL  G  +  + +EALK+     E  + P     D  TY  ++  L    K DE   LF E +           N L +G        + G  D   + F++    GI+        ++  +   G++D+ + L  E+  +   P       L+           CK+ + L+ AL+L EE+  +G +P
Sbjct:   18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIK---------------PDVVTYNTLIDGLCKAGKLDEALKLFEEMV-EKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEK-GIKPDVVTYNTLIDG----------------------------LCKAGKLDE----ALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKL-FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP-----DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC------KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG--------LCKAGK-LDEALKLFEEMVEKGIKP 399          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|1023176431|pdb|5I9G|C (Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8c2 In Complex With Its Target Rna U8c2)

HSP 1 Score: 111.694 bits (278), Expect = 7.538e-22
Identity = 118/454 (25.99%), Postives = 189/454 (41.63%), Query Frame = 0
Query:  536 AFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICR---ESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERI-----------NALREGKANERASQRTGLPDSDGRHFQDSKRSGIQK---LLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERP 972
            A+  V+ A  +AG  E A +L   L  +G+ P+  +YN L+    + G++ +A  LFE M   G                 P  V YNT++  L K G  ++A  L   M   +   PD+V+YNT++     A     A   F EEMV+K  ++PD VTY TL+                              L K    DE     L LF+++   +G  P+++ +N ++D  CK G +D+A  L    M     +P  VTYNTL  G  +  + +EALK+     E  + P  +     TY  ++  L    K DE   LF E +           N L +G        + G  D   + F++    GI+        ++  +   G++D+ + L  E+  +   P       L+           CK+ + L+ AL+L EE+  +G +P
Sbjct:   18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIK---------------PDVVTYNTLIDGLCKAGKLDEALKLFEEMV-EKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEK-GIKPDVVTYNTLIDG----------------------------LCKAGKLDE----ALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKL-FEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVV-----TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC------KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG--------LCKAGK-LDEALKLFEEMVEKGIKP 399          

HSP 2 Score: 73.1738 bits (178), Expect = 2.100e-9
Identity = 58/198 (29.29%), Postives = 91/198 (45.96%), Query Frame = 0
Query:  502 RWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLL 699
            +  E+L++   + E       KG+  S +      +  +I    KAG L+ A  L + +  +G+ PS  +YN L+    + G++ +A  LFE M   G                 P  V YNT++  L K G  ++A  L   M   +   PD+V+YNT++     A     A   F EEMV+K  ++PD VTY TL+
Sbjct:  206 KLDEALKLFEEMVE-------KGIKPSVV-----TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIK---------------PDVVTYNTLIDGLCKAGKLDEALKLFEEMV-EKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEK-GIKPDVVTYNTLI 373          

HSP 3 Score: 68.9366 bits (167), Expect = 4.018e-8
Identity = 66/249 (26.51%), Postives = 108/249 (43.37%), Query Frame = 0
Query:  742 QTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRE---SRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERI-----------NALREGKANERASQRTGLPDSDGRHFQDSKRSGIQK---LLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERPS 973
            + L LF +L   +G AP ++ +N ++D  CK G +D+A  L    M     +PD VTYNTL  G  +  + +EALK+  E     + P     D  TY  ++  L    K DE   LF E +           N L +G        + G  D   + F++    GI+        ++  +   G++D+ + L  E+  +   P       L+           CK+ + L+ AL+L EE+  +G +PS
Sbjct:   34 RALELFAELRR-QGVAPTVVTYNTLIDGLCKAGKLDEALKL-FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP-----DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC------KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDG--------LCKAGK-LDEALKLFEEMVEKGIKPS 260          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|1023176433|pdb|5I9H|A (Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8g2 In Complex With Its Target Rna U8g2)

HSP 1 Score: 111.309 bits (277), Expect = 9.209e-22
Identity = 118/454 (25.99%), Postives = 188/454 (41.41%), Query Frame = 0
Query:  536 AFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICR---ESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERI-----------NALREGKANERASQRTGLPDSDGRHFQDSKRSGIQK---LLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERP 972
            A+  V+ A  +AG  E A +L   L  +G+ P+  +YN L+    + G++ +A  LFE M   G                 P  V YNT++  L K G  ++A  L   M   +   PD+V+YNT++     A     A   F EEMV+K  ++PD VTY TL+                              L K    DE     L LF+++   +G  P+++ +  ++D  CK G +D+A  L    M     +PD VTY TL  G  +  + +EALK+     E  + P     D  TY  ++  L    K DE   LF E +           N L +G        + G  D   + F++    GI+        ++  +   G++D+ + L  E+  +   P       L+           CK+ + L+ AL+L EE+  +G +P
Sbjct:   18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIK---------------PDVVTYNTLIDGLCKAGKLDEALKLFEEMV-EKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEK-GIKPDVVTYNTLIDG----------------------------LCKAGKLDE----ALKLFEEMVE-KGIKPDVVTYTTLIDGLCKAGKLDEALKL-FEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKP-----DVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC------KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG--------LCKAGK-LDEALKLFEEMVEKGIKP 399          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|1190959397|ref|XP_020890418.1| (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g64100-like [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 112.849 bits (281), Expect = 2.953e-21
Identity = 175/861 (20.33%), Postives = 326/861 (37.86%), Query Frame = 0
Query:   64 PHAPETNLDALEVLKKQKNAVSSLAWLRSIRSALSPEAYYKVLEISREACDAHS---ALGVLSLMKSQGQHLDVKACTIAIEVCARAGDIDNAERVLSEMKASGLKCSPVNYHHIIHACRRQRNGTKALHMLDHMAIDGLAPDRKAYVHVLGACGAQSLMSEAETLLHRITNEDLKGSVEVDQELCSSLVVGAAENGRRKGWAGSWRAWEVVREHRTGL--TAIAFKALRSSLTRTGQYERLLDLCRDLQGALDSSGRSQGLSTASQSAEDVATTG--IEACLHLEDHAELKKCVQKRLRQGAF-HAIVYQEALSAWLALGRWDEMLRLYRDGQEGEAWEDDYLLLSIMATGAARLSKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQ------TGEKVASGGSLRHDY--ESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKG------VGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAW---------QAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVW--------------LQTLALF-------KDLENAE---------GGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRE-SRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERINA 862
            P      L  + V  K+ + V SL     +R    P   Y    + +  C  H    AL  L  +   G   DV      I        I  A  +   M  +GL  + V +  +++   R+    +A+ ++D M  +G  PD   Y  ++           A  LL ++    +K +V +   +   L   A  +  +  +            H  G+    + +  +       G++     L RD+                S    DV T    I A +     +E ++  ++ L +  F   I Y   +  +    R D+   ++ D    +    + + ++ +  G  R  +  + D +  L +M RRG +       ++    I  F +   A D N +    Q          + + GSL   +    K   A+   E+ +++       +  ++     C G    K       + ++ +ER +  +  +IS  VK GN  +A+DL   +  +G+ P+  +YN+++  + +  ++ +A+ + ++M               A  G  P  V ++T++    K    +D   L   M+  R   PD VSYNT++     A D   A+D F+E +   + V PD VT  TLL              M + +  S+ +    T ++   +   K +   DE W              +QT  +        ++   AE         G  PN + +N M+D  CK   +++AR +V  +M    C PD VT+NTL  G+ + RR ++ L++  E SR G V    ++ TY  ++     +   +    +F E +++
Sbjct:   86 PAVDFNKLMGVIVRMKRPDVVISLYQKMELRRI--PFDIYSFSILIKCFCSCHKLSFALSTLGKITKLGFQPDVVTFNTLIHGLCLEDRISEAVALFDHMVETGLTPNVVTFTTLMNGLCREGRVLQAVALVDRMVENGHQPDEITYGTIVNGMCKLGDTESALNLLRKMELSHIKANVIIYNAIIDRLCKDAHHSDAQNLFT---------EMHEKGIFPDVLTYNCMIDGCCSYGKWSDAEQLLRDM--------------IESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIF-DLMVSKGCSPNVITINTLIGGCCRAKR--VDDGMKLLHDMSRRGLVPDSVSYNTI----IHWFCQ---AGDLNAAQDLFQEMISHGVSPNIVTCGSLLDGFCENGKLDKALEMFEVFQKSKMDLDTATYNIIIN-GMCKGNKVDKAWDLFNSLPLNGVERDVQTYNIMISGLVKVGNFLSAEDLYLEMLCKGIVPNTVTYNSMVDGFCKQNRLEEARQMVDSM---------------ASEGCSPDVVTFSTLINGYCKARRVDDGLELFSEMSR-RGIVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMI--SQGVSPDIVTCNTLLGGLCENGNLEKALEMFKVFQTSKMDLDTATYNIIIINGMCKGN-KVDEAWDLVNSLPLNGVETGIQTYNILIGVFVKERNFLKAEDLYLKMLCKGLVPNTVTYNSMVDGFCKQNRLEEARQMV-DSMASEGCSPDVVTFNTLVNGFCKARRVDDGLELFSEMSRRGIV---ANTVTYSTLIHGFCQVGDLNGALDIFQEMVSS 887          

HSP 2 Score: 88.1965 bits (217), Expect = 9.408e-14
Identity = 101/459 (22.00%), Postives = 191/459 (41.61%), Query Frame = 0
Query:  540 VISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLA--------------LFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERINALREGKANERASQRTGLPDS---DGRHFQDSKRSGIQKLLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGAD----SFERSVQ-FCKSTRDLEGALRLLEELERRGERPSAAA 976
            +++   K G+ E+A +LL++++   +  +   YNA++    +    SDAQ LF  M       HE         G  P  + YN M+      G + DA+ L+R M       PD+V++N ++ A         A + + E +   R + PD +TY +L+  +   +R      D+  HI          + K    + + + TL               L  D+    G  P+ +++N ++   C+ G ++ A+ L    M  H   P+ VT  +L  G+    + ++AL++    +   ++L  D+ TY +++  +    K D+     W+  N+L      ER  Q   +  S      +F  ++   ++ L + I+   V    + DG      LE      Q  +++   G      +F   +  +CK+ R ++  L L  E+ RRG  P + +
Sbjct:  233 IVNGMCKLGDTESALNLLRKMELSHIKANVIIYNAIIDRLCKDAHHSDAQNLFTEM-------HE--------KGIFPDVLTYNCMIDGCCSYGKWSDAEQLLRDMIESNVD-PDVVTFNALINAFVKEGKISEAEELYREML--GRNIFPDTITYNSLIDGFCKHSR-----LDDAKHI------FDLMVSKGCSPNVITINTLIGGCCRAKRVDDGMKLLHDMSR-RGLVPDSVSYNTIIHWFCQAGDLNAAQDL-FQEMISHGVSPNIVTCGSLLDGFCENGKLDKALEMFEVFQKSKMDL--DTATYNIIINGMCKGNKVDKA----WDLFNSLPLNGV-ERDVQTYNIMISGLVKVGNFLSAEDLYLEMLCKGIVPNTVTYNSMVDGFCKQNRLE---EARQMVDSMASEGCSPDVVTFSTLINGYCKARR-VDDGLELFSEMSRRGIVPDSVS 649          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|1023176427|pdb|5I9D|A (Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8a2 In Complex With Its Target Rna U8a2)

HSP 1 Score: 108.612 bits (270), Expect = 7.187e-21
Identity = 117/453 (25.83%), Postives = 190/453 (41.94%), Query Frame = 0
Query:  536 AFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSH--TYGVMLKALAGLKKDDEMKGLFWERI-----------NALREGKANERASQRTGLPDSDGRHFQDSKRSGIQK---LLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERP 972
            A+  V+ A  +AG  E A +L   L  +G+ P+  +YN L+    + G++ +A  LFE M   G                 P  V YNT++  L K G  ++A  L   M   +   PD+V+YNT++     A     A   F EEMV+K  ++PD VTY TL+                              L K    DE     L LF+++   +G  P+++ ++ ++D  CK G +D+A  L    M     +P+ VTY+TL  G  +  + +EALK+  E     V  G   +  TY  ++  L    K DE   LF E +           N L +G        + G  D   + F++    GI+        ++  +   G++D+ + L  E+  +   P       L+           CK+ + L+ AL+L EE+  +G +P
Sbjct:   18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIK---------------PDVVTYNTLIDGLCKAGKLDEALKLFEEMV-EKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEK-GIKPDVVTYNTLIDG----------------------------LCKAGKLDE----ALKLFEEMVE-KGIKPDVVTYSTLIDGLCKAGKLDEALKL-FEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEM----VEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC------KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG--------LCKAGK-LDEALKLFEEMVEKGIKP 399          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|302806733|ref|XP_002985098.1| (hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii] >gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii])

HSP 1 Score: 110.153 bits (274), Expect = 1.060e-20
Identity = 100/386 (25.91%), Postives = 161/386 (41.71%), Query Frame = 0
Query:  513 LCECAGRLEA-KGVGVSALERA----MPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAW---QAMARGYGRSED--------------------------EESHITGHVPHASPRLKKDVDSDEVWLQTLA-------------LFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDDE 851
            LC+  G+++A + V    LER+    +  +  +I    +   L+ A+ L++++   G+ P   +YNALL    +  Q+ +   L E M  AG+                P   +YNT++  L ++G +E+A  ++  M   +   PD+V+YN+++           A    E+ MV +R   P  +TY TL+  +     +A  Y   ED                          EE+H    V      ++KD   D V    L              L  ++    G  PNL+ FN M+D  CK G VD+    VL  MK  +C PD VTY+TL  GY +  R ++A  I        + +  D  +Y  ML+ L    K +E
Sbjct:  137 LCK-MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE---------------PDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC-GPDVVTYNSLMDGFCKVSKMDEAERLLED-MVGRR-CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEV-----MVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK-VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI--------LGISPDKASYSSMLEGLCSTGKVEE 489          
BLAST of EWM26689.1 vs. NCBI_GenBank
Match: gi|299471045|emb|CBN78905.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 109.768 bits (273), Expect = 1.628e-20
Identity = 138/626 (22.04%), Postives = 254/626 (40.58%), Query Frame = 0
Query:  740 WLQTLALFKDLENAEGGAPNLMAFNIMMDIGCKTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERINALREGKANERASQRTGLPDSDGRHFQDSKRSGIQKLLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLLGADSFERSVQFCKSTRDLEGALRLLEELERRGERPSAAACFAVMRLCSIKQAWQTGLDVVERVAQCPELSRAMGRDLHTARVSFCAHLNDIAGCRVALREMRKEGFLPDEKVYGWALKCEATRPRNVGGVGELLVQAKEDGVM--LTPDVLKAQMA--TLRQSGNWRGAVQLLDRMVALREQQLQNEEQDGQASQRVVRGTDADYGPQISQVTEISTHIFNDVLATLAQGKEWYQILELQGNMLEKHGVVPDNVSFLYRLQALSETKDWKQALAVLDEIRIGAHGPPVFAQDSMYTVILSGGALDRQPKEIEGLVMRWEEDSRPYTRHFLNALIGAYGRGGQLAKAVDTFNKIPTHLNGAEPDIVAFNALLVAQRLAATPLDEGALPLYRELLSRAPSGLAPDGWTYTSLIVACEAKGAWPVAMYLYD 1361
            W + L L +++   EG +PN+  +N  ++  C +G   +    +L  M      PD ++YN+  +   RG ++E  + + RE  +  V L  D+ TY  ++    G  K+ + K    E ++ L E       S +   P++   +                + A    GR  + V ++R++E+Q   P            S++ +++ C      E ++ LL+E+  RG  P+     + +  C     W+  ++++  V     L          + ++ C            L+EM  +   PD   Y  A++         GG  E+ ++ +       LTP+V+ + +A     + G W+  ++LL +M A                                Q    +   +N  + T  +G +W + L+L   M E   + PD++++   + A S+   WK+A+A+L E+      P V +  +        G  +R    +E L     +   P    + N++I A GRGG+  KA+D   ++        PD++++N  L           E AL L RE+ +    GL PD  +YTS I AC A+G W  A+ L +
Sbjct:  160 WEKALELLREIPEQEGVSPNVFCYNSAIE-ACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLRE--MPSVGLTPDAITYNSVI---TGCGKEGQWK----EALSVLTE------MSAKGLTPETISYNMA--------------IRACGRSGRWKEAVEVLRQMESQGVTPD---------VISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTA---LGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGK-----GGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPA--------------------------------QGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKE-LAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERA---VELLRQMPTKGLTPNVITY-NSVIKACGRGGEWEKALDLLKELKE--TAVAPDLMSYN--LAISACGKRGRWEEALDLLREMPAE---GLTPDVISYTSAIRACNAEGEWEKALGLLN 694          

HSP 2 Score: 91.6633 bits (226), Expect = 6.242e-15
Identity = 140/620 (22.58%), Postives = 245/620 (39.52%), Query Frame = 0
Query:  621 NYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTYITLLSAWQAMARGYGRSEDEESHITGHVPHASPRLKKDVDSDEVWLQTLALFKDLENAEGGAPNLMAFNIMMDIGC-KTGHVDDARSLVLPAMKRHACEPDRVTYNTLAQGYLRGRRYEEALKICRESRVGPVNLGWDSHTYGVMLKALAGLKKDDEMKGLFWERINALREGKANERASQRTGLPDSDGRHFQDS----KRSGIQKLLEEILSAMVYVGRVDDGVLLIRELENQISGPQKKNALYLL----------GADSFERSVQFCKSTRDLEGALRLLEELERRGERPSAAACFAVMRLCSIKQAWQTGLDVVERVAQCPELSRAMGRDLHTARVSFCAHLNDIAGCRVALREMRKEGFLPDEKVYGWALKCEATRPRNVGGVGELLVQAKEDGVMLTPDVLK--AQMATLRQSGNWRGAVQLLDRMVALREQQLQNEEQDGQASQRVVRGTDADYGPQI---SQVTEISTHIFNDVLATLAQGK--EWYQILELQGNMLEKHGVVPDNVSFLYRLQALSETKDWKQALAVLDEIRIGAHG 1218
            +Y T +    + G +E A  L+R +      +P++  YN+ + A  +    + A     E  +  R+V PDE++Y    SA +A  RG            G                  W + + L +++ +  G  P+ + +N ++  GC K G   +A S VL  M      P+ ++YN   +   R  R++EA+++ R+     V    D  +Y   +KA  G        G  WE    L +  A    +  T        HF  +     + G  +   E+L  +  +G   D       +       + K AL LL           A S+  +++ C      E AL L  ++  +G  P+  +    +R C  +  WQ GL+++    Q P          + + +  C            L +M++    PD   Y  A+   + R R    V  LL +    G  LTPDV+   A +    ++G W  AV+LL +M    +    N        +   RG + +    +    + T ++  + +  LA  A GK   W + L+L   M    G+ PD +S+   ++A +   +W++AL +L+   +GAHG
Sbjct:  146 SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLRE--MADREVVPDEISYN---SAIKACGRG------------GQ-----------------WERVIGLLREMPSV-GLTPDAITYNSVI-TGCGKEGQWKEALS-VLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTP--DVISYDAAIKACGG--------GGQWETSVDLLDEMAGRGVAPNT-------IHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLR---QMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVA-LLREMPGQG--LTPDVISYTAAIDAYGKNGQWERAVELLRQMPT--KGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREM-PAEGLTPDVISYTSAIRACNAEGEWEKALGLLN--LMGAHG 700          

HSP 3 Score: 89.7373 bits (221), Expect = 2.763e-14
Identity = 137/632 (21.68%), Postives = 246/632 (38.92%), Query Frame = 0
Query:   73 ALEVLKKQKNAVSSLAWLRSI--RSALSPEAYYKVLEISREACDAHS----ALGVLSLMKSQGQHLDVKACTIAIEVCARAGDIDNAERVLSEMKASGLKCSPVNYHHIIHACRRQRNGTKALHMLDHMAIDGLAPDRKAYVHVLGACGAQSLMSEAETLLHRITNEDLKGSVEVDQELCSSLVVGAAENGRRKGWAGSWRAWEVVREHRTGLTAIAFKALRSSLTRTGQYERLLDLCRDLQGALDSSGRSQGLSTASQSAEDVATTGIEACLHLEDHAELKKCVQKRLRQGAFHAIVYQEALSAWLALGRWDEMLRLYRDGQEGEAWEDDYLLLSIMATGAARLSKTPMKDSVPFLMNMERRGWIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTG---EKVASGGSLRHDYESKPVHAIVALEMLRRADSRRWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSMTPPRAPAPDLVSYNTVLAAGTAARDPKGARDFFEEEMVKKRKVRPDEVTY 695
            A+    +Q     +L  LR I  +  +SP  +     I  EAC +      A+ +L  M  +    D  +   AI+ C R G  +    +L EM + GL    + Y+ +I  C ++    +AL +L  M+  GL P+  +Y   + ACG      EA  +L ++ ++ +   V     +     + A   G +  W  S    + +         I F +   +  + GQ+E+ ++L R++         + GL+  + S         ++    E    LK+   KRL+     AI Y  A+ A    G+W+  L L R                 M T    L+   +  ++      ER  W  G+     +PA  ++P   +     +N++ +    G   EK     +   +    P        +   +   RW+E++ +LR         E  G G   L   + ++   I A  K G  E A +LL+++  +G+ P+  +YN+++    R G+   A  L + +        E   A        P  ++YN  +    K G +E+A  L+R M P     PD++SY + + A  A  + + A       ++    V P   +Y
Sbjct:  150 AITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAI--EACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDV-----ISYDAAIKACGGGGQ--WETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVT--------ALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKP---DAISYNSAIEACGKGGQWEMALELRRQ----------------MPTKG--LTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVIT-----YNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLR---------EMPGQG---LTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKEL-------KETAVA--------PDLMSYNLAISACGKRGRWEEALDLLREM-PAEGLTPDVISYTSAIRACNAEGEWEKALGLL--NLMGAHGVSPTATSY 708          

HSP 4 Score: 87.4261 bits (215), Expect = 1.438e-13
Identity = 133/569 (23.37%), Postives = 229/569 (40.25%), Query Frame = 0
Query:   90 LRSIRS-ALSPEA--YYKVLEISREACDAHSALGVLSLMKSQGQHLDVKACTIAIEVCARAGDIDNAERVLSEMKASGLKCSPVNYHHIIHACRRQRNGTKALHMLDHMAIDGLAPDRKAYVHVLGACGAQSLMSEAETLLHRITNEDLKGSVEVDQELCSSLVVGAAENGRRKGWAGSWRAWEVVRE---HRTGLTAIAFKALRSSLTRTGQYERLLDLCRDLQGALDSSGRSQGLSTASQSAEDVATTGIEACLHLEDHAELKKCVQKRLRQGAF-HAIVYQEALSAWLALGRWDEMLRLYRDGQEGEAWEDDYLLLSIMATGAARLSKTPMKDSVPF---LMNMERRG-WIAGMSESPSLPASSISPFARSLLARDWNTSPRQRQTGEKVASGGSLRHDYESKPVHAIVALEMLRRADSR--RWQESLQVLRRLCECAGRLEAKGVGVSALERAMPAFERVISAAVKAGNLEAAKDLLKRLDARGMCPSARSYNALLYEYARTGQVSDAQTLFEAMCAAGKGRHEDNAAGGAFHGPVPSRVNYNTMLLVLAKTGAFEDAKALVRSM 645
            LR + S  L+P+A  Y  V+    +      AL VL+ M ++G   +  +  +AI  C R+G    A  VL +M++ G+    ++Y   I AC        ++ +LD MA  G+AP+   +   + ACG      +A  LL  +T   L      D    +S +    ++GR K       A E+++E    R    AI++ +   +  + GQ+E  L+L R +         ++GL T +  + ++A   I AC       E  + +++   QG   + I Y  A+      G+W++ L L    +E                    L+ TP  DS+ +   +    +RG W   ++    +P   ++P   S  A          + G+   +   LR          ++    + +A  R   W+++L +L+ L E            +A+   + ++   ISA  K G  E A DLL+ + A G+ P   SY + +      G+   A  L   M A               HG  P+  +Y+  +    K G  E+A  LVR M
Sbjct:  238 LREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLT----PDATSFNSAIAACTKSGRWK------EALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMP--------TKGL-TPNVISSNIA---IRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKE--------------------LAMTP--DSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTA----AIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKE------------TAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGA---------------HGVSPTATSYSLAIEACGKGGRREEAVCLVREM 731          
The following BLAST results are available for this feature:
BLAST of EWM26689.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108777|gb|EWM26689.1|0.000e+0100.00pentatricopeptide repeat-containing protein mitoch... [more]
gi|553196627|ref|XP_005856386.1|0.000e+0100.00pentatricopeptide repeat-containing protein, parti... [more]
gi|1040877147|ref|XP_017248819.1|9.834e-2423.02PREDICTED: putative pentatricopeptide repeat-conta... [more]
gi|1023176429|pdb|5I9F|A2.052e-2326.43Chain A, Crystal Structure Of Designed Pentatricop... [more]
gi|1023176431|pdb|5I9G|C7.538e-2225.99Chain C, Crystal Structure Of Designed Pentatricop... [more]
gi|1023176433|pdb|5I9H|A9.209e-2225.99Chain A, Crystal Structure Of Designed Pentatricop... [more]
gi|1190959397|ref|XP_020890418.1|2.953e-2120.33LOW QUALITY PROTEIN: pentatricopeptide repeat-cont... [more]
gi|1023176427|pdb|5I9D|A7.187e-2125.83Chain A, Crystal Structure Of Designed Pentatricop... [more]
gi|302806733|ref|XP_002985098.1|1.060e-2025.91hypothetical protein SELMODRAFT_121399 [Selaginell... [more]
gi|299471045|emb|CBN78905.1|1.628e-2022.04conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4075rna4075Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications