EWM26619.1, cds4058 (CDS) Nannochloropsis gaditana

Overview
NameEWM26619.1
Unique Namecds4058
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:774265..774591 -
Alignment locationCM002462.1:773945..774183 -
Alignment locationCM002462.1:773710..773773 -
Alignment locationCM002462.1:773412..773502 -
Alignment locationCM002462.1:773097..773260 -
Alignment locationCM002462.1:772903..772958 -
Alignment locationCM002462.1:772627..772764 -
Alignment locationCM002462.1:772439..772553 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26619.1
Productretinol retinaldehyde reductase
Orig transcript idgnl|cribi|Naga_100001g45.8130.mrna
GeneRdh1
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:774265..774591 -
CM002462.1supercontigCM002462.1:773945..774183 -
CM002462.1supercontigCM002462.1:773710..773773 -
CM002462.1supercontigCM002462.1:773412..773502 -
CM002462.1supercontigCM002462.1:773097..773260 -
CM002462.1supercontigCM002462.1:772903..772958 -
CM002462.1supercontigCM002462.1:772627..772764 -
CM002462.1supercontigCM002462.1:772439..772553 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR002198DH_sc/Rdtase_SDR
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|585108707|gb|EWM26619.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 830.476 bits (2144), Expect = 0.000e+0
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0
Query:    1 MLTSDDSGGTHASTSLPSTRPRRTRQSIISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHDVFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTIFSWGTRFKDVKPRALELQVPHRSSSLPAGESL 397
            MLTSDDSGGTHASTSLPSTRPRRTRQSIISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHDVFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTIFSWGTRFKDVKPRALELQVPHRSSSLPAGESL
Sbjct:    1 MLTSDDSGGTHASTSLPSTRPRRTRQSIISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHDVFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTIFSWGTRFKDVKPRALELQVPHRSSSLPAGESL 397          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|585108794|gb|EWM26706.1| (retinol dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 270.011 bits (689), Expect = 6.950e-84
Identity = 142/361 (39.34%), Postives = 212/361 (58.73%), Query Frame = 0
Query:   13 STSLPS--TRPRRTRQSIISKLNDFVHRD-YITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYP-EGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHD----VFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTI 365
            +  +PS  ++P    + ++S+LN+F+H + Y+  I +Y +WLGFW+F+P V     L   +YDL TA+G+R+PCGPVL+TGC +GFG  L +ALA + WKV A    +  +     P + + N+  + LD++N+++++A    +  + P EGLYALVNN         G  +W ++D +K+HM+VN Y  IR TKA LPLLK+Y R  S    RI+ +NS +G++PG P    Y+ +KHA +AW +SL  E   + I+   V P WH+        +    VF   P  VQE+YG  Y  +  E +   R    WK ENV   ++ AVTAE+ RP  +VG+D RF+  P L LPRR+ N +
Sbjct:   11 TVDIPSAPSKPEEKHEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMA----PFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAG---FEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAA-RIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNNL 363          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|585108719|gb|EWM26631.1| (NAD(P)-binding domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 227.639 bits (579), Expect = 1.570e-66
Identity = 110/281 (39.15%), Postives = 172/281 (61.21%), Query Frame = 0
Query:   11 HASTSLPSTRPRRTRQSIISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYP-EGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHDVFARL 290
            H + S P  +  R +++++S+LN F+  DY++D  +YGFW  FW+FMP V+L G + +A+YD +T +G R+P GPVL+TGCD+GFG+ LALAL+E  W V A C T  GV  + +  NG   +  + +D++ +++++A    + A +P EGLYALVNN     V + G  +W  +++Y+ HME+N +  +R  K  LPLLK+  R       RI+ + S +G++PG    S Y  +KHA ++W +SL  E   +GI+   V P WH  +I + Q D   R+
Sbjct:   36 HGALSKPDGKTAR-KETLLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAK--NG--KVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAG---VDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRI 308          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|585111089|gb|EWM28666.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 189.504 bits (480), Expect = 5.980e-53
Identity = 110/343 (32.07%), Postives = 182/343 (53.06%), Query Frame = 0
Query:   28 IISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLL---AVYDLITARGYRQPCGP--VLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQ----HDVFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRL 361
            +I+  N+  H     D+ +Y F+   W + P   LLG L+    A      +  Y +P     V++TGCDTGFGK+LAL L ++ +KV A+C T       ++  +    +  I LD++ +D++ + A  ++A +P+G++ALVNN     V + GL++W+ + +++  MEVN ++ +  TKAFLP LKK        K RI+ ++S AG+  G P    Y+ +KHA + + S+L  E   WGI  +T+ P +H  +I++         F + P  +QEEYG +Y     E++           +NV  A VHA+T+ + +    VGID + L   L + P R+
Sbjct:    3 LINWANNVAHIPVFEDMCYYNFFFWAWFWGP---LLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDA---LQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAG---VSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKK-------SKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRV 329          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|585111118|gb|EWM28695.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 180.259 bits (456), Expect = 2.145e-49
Identity = 106/339 (31.27%), Postives = 187/339 (55.16%), Query Frame = 0
Query:   33 NDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGY----RQPC--GPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQ----HDVFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRL 361
            N+  H D + + ++Y ++ G W+  P        L+ VYD  +   +     +P     + +TGCDTGFG++LA+ LA++ ++V AAC T  GV+  +   +    ++ + LD+++++++Q  A  + A+ PEGLYALVNN     V K GL++W  + +++  MEVN +  +  TKAFLPL+K       RCK RIV ++S AG+  G P ++ Y+ +KHA + + SSL  E   WGI+ +T+ P +H  +++          ++++   +Q +YG+ Y+    +  K     +++   NV  A+ HAVT  + R    VG+D ++ +    + P R+
Sbjct:    9 NNLCHIDLLEEWIWYSYFTGAWLLGP----FMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECS---TVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAG---VAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIK-------RCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRV 330          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|585106696|gb|EWM25060.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana])

HSP 1 Score: 181.415 bits (459), Expect = 1.673e-46
Identity = 120/350 (34.29%), Postives = 179/350 (51.14%), Query Frame = 0
Query:   28 IISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITA---RGYRQPCG-PVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSM-NIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHDVFAR----LPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTIFSW 368
            +++ +ND +H   + DI ++ +     + + P+  LG L+  +  L++        QP G  VL+TGCDTGFG  LA+AL ++ W+V A C T   V   +  A GS  ++  + +D++   +I    E +A + P+ L+A+V N     VG+ GLV+W  +  Y+  MEVNL+A I   KA LPLLK+        K RIV + S AGI  G P  S YA +KHA +A+ +SL FE   WGI   TV P +H   I     +   +    L  + Q EYG +Y   V + +    +   W   +V + LV A TA   R   +VG D  F + PL+ LP      I S+
Sbjct: 1210 MLNLMNDIMHLPIVDDIAWHLYHF-VRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAG---VGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKE-------SKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDGC-WDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSF 1547          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|1210512056|dbj|GAX28911.1| (17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) [Fistulifera solaris])

HSP 1 Score: 146.747 bits (369), Expect = 1.319e-36
Identity = 99/365 (27.12%), Postives = 180/365 (49.32%), Query Frame = 0
Query:   27 SIISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILL-----------GTLLLAV--YDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEG------LYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDI----DYFQHDVFARLPLRVQEEYGRQYYNKVMESSKALRNPIM--WKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTIF 366
            + + ++N  +H++    I++  +W        P+ +L           G +L +V  Y     +G+      V++TGCDTGFG+ +AL  AE  + V A C  +  V    + +N   NI    ++++ND+ ++  A++++    E       L+AL+N      VG  G V++M ++ ++  M+VN +  +R  KAFLP+ K      +    RI+ + S AG+VP     S YA +K+A   + ++   EA  +GI+ AT+ P +HE +I          + A LP   +EEYG ++   ++  +   R P++  W+AENV    ++ +    +   VVVG D +F++  L + P    + +F
Sbjct:   11 AFLQEINSLIHQEPFESILYCVYWSVVIGVCSPIAILLLQLRLLFRLLGWILDSVRKYSACDPKGHPTRESAVVITGCDTGFGRDVALRAAEAGYIVFAGCLKEESVTERNQLSN---NIKAFTMNVTNDEHVEKAAQMVSRWLDETTTQQRILHALINMAG---VGFCGNVDFMPLNLFQTSMDVNFFGTVRCCKAFLPIFKSQATSNTYNDARILNIVSMAGLVPTSVGTSAYAASKYAVQGFSTAFRLEAMGFGIQVATINPSFHETNIVTGLSTQVEKLCADLPGAKREEYGEEFLEWLLTQT---RIPLLVSWRAENVVQQTMNCLMNRSIPSEVVVGSDAKFVLVTLRIFPAWFRDILF 366          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|12006414|gb|AAG44847.1|AF283540_1 (microsomal retinol dehydrogenase 1 [Branchiostoma floridae])

HSP 1 Score: 140.198 bits (352), Expect = 1.286e-34
Identity = 94/287 (32.75%), Postives = 149/287 (51.92%), Query Frame = 0
Query:   86 VLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLA-AQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQH------DVFARLPLRVQEEYGRQYY----NKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRL 361
            VL+TGCDTGFG  LA  L +   +V A C T+ GV   R+    S  + PI++D+S+ D +Q    ++  A   +GL+ LVNN     V   G +EW T+++Y+  + VNL   I  TK FLPLLKK +        R+V + S AG V   P+A  Y VAK+  +A+  SL      +G++   + P +   +I+  ++      D++ RL    + EYG ++     + ++ S + +++P+      V  A+ HA+ A   R   V+G D RF+  P+  LP  L
Sbjct:   37 VLITGCDTGFGNLLAKRLDQLGLRVFAGCLTEAGVAELRQSC--SERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLWGLVNNAGILGVA-GGTMEWATMEDYQAVLNVNLLGMIDVTKTFLPLLKKSS-------GRVVNVASAAGRV-AVPDAGPYTVAKYGVEAFSDSLRRAMRYFGVKVHIIEPGYFRTEINNQENALRRLDDIWQRLSPETRTEYGEEFLQAGKDAIIASDRFMQDPVA-----VVDAMEHALCATHPRSRYVIGWDARFIFVPICWLPTDL 307          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|1210525164|dbj|GAX16098.1| (17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) [Fistulifera solaris])

HSP 1 Score: 139.043 bits (349), Expect = 9.025e-34
Identity = 90/293 (30.72%), Postives = 150/293 (51.19%), Query Frame = 0
Query:   86 VLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEG------LYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDI----DYFQHDVFARLPLRVQEEYGRQYYNKVMESSKALRNPIM--WKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTIF 366
            V++TGCDTGFG+ +AL  AE  + V A C  D   +S  E    S NI+   ++++ D  ++    +++    E       L+ALVN      VG  G V++M ++ ++  M+VN +  +R  KAFLP+ K      +    RI+ + S AG+VP     S YA +K+A   + ++   EA  +GI+ AT+ P +HE +I          + A LP   +EEYG +Y   ++  +   R P++  W+AENV    ++ +    +   VVVG D +F++  L + P    + +F
Sbjct:   83 VVITGCDTGFGRDVALRAAEAGYTVFAGCLKD---ESVTELNQLSSNINSFTMNVTIDVHVEKAVHIVSQWLDETTTQQRILHALVNMAG---VGFCGNVDFMPLNLFQTSMDVNFFGTVRCCKAFLPIFKSQATSNTYNDARILNMVSMAGLVPTSVGTSAYAASKYAVQGFSTAFRLEAMGFGIQVATINPSFHETNIVTGLSTQVEKLCADLPGAKREEYGEEYLEWLLTQT---RIPLLISWRAENVVQQTMNCLVNRTIPSEVVVGSDAKFVLVTLRIFPAWFRDILF 366          
BLAST of EWM26619.1 vs. NCBI_GenBank
Match: gi|1001610305|gb|KXS14083.1| (NAD(P)-binding protein [Gonapodya prolifera JEL478])

HSP 1 Score: 134.035 bits (336), Expect = 4.007e-32
Identity = 96/283 (33.92%), Postives = 136/283 (48.06%), Query Frame = 0
Query:   86 VLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGS---MNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEW--MTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRC-------KPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEID----IDYFQHDVFARLPLRVQEEYGRQYYNKVMESSKALRN--PIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFL 350
            V VTGCDTGFG   A  LAE+ + V AAC TD+G++S+ + A        I  +KLD++ D ++QAC  LL  + PEGL+ LVNN      G     +W    +D  +  MEVN Y  +R T AFLPLL++Y               PRIVT++S AG V   P+ S Y  +KHA   +  +L  E    GI  + + P +        ID  +       P  V E YG +   +   S  A     P + +   V + +V  V A +  P+ +VG +   L
Sbjct:   56 VFVTGCDTGFGNITAKQLAEKGYTVYAACLTDSGIESFNKLAASDSRYRTIRAVKLDVTKDADVQACRALLEREAPEGLFCLVNN-----AGLHAAYKWELSPMDMIQKDMEVNYYGVVRVTMAFLPLLRRYVASNKSAIAAGQAPPPRIVTVSSIAGSVKASPSGS-YCASKHAAQVFGVTLRQEVAHQGIHVSLIEPYYARTPFLTVIDERKIQRILSQPKEVIEAYGGEADIRKRMSRSAFHTAMPRVLEPPEVMNVMVGQVHAWRPNPHNLVGFESNLL 332          
The following BLAST results are available for this feature:
BLAST of EWM26619.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108707|gb|EWM26619.1|0.000e+0100.00retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585108794|gb|EWM26706.1|6.950e-8439.34retinol dehydrogenase [Nannochloropsis gaditana][more]
gi|585108719|gb|EWM26631.1|1.570e-6639.15NAD(P)-binding domain containing protein [Nannochl... [more]
gi|585111089|gb|EWM28666.1|5.980e-5332.07retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585111118|gb|EWM28695.1|2.145e-4931.27retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585106696|gb|EWM25060.1|1.673e-4634.29serine threonine-protein kinase dclk3 [Nannochloro... [more]
gi|1210512056|dbj|GAX28911.1|1.319e-3627.1217beta-estradiol 17-dehydrogenase / 3alpha(17beta)... [more]
gi|12006414|gb|AAG44847.1|AF283540_11.286e-3432.75microsomal retinol dehydrogenase 1 [Branchiostoma ... [more]
gi|1210525164|dbj|GAX16098.1|9.025e-3430.7217beta-estradiol 17-dehydrogenase / 3alpha(17beta)... [more]
gi|1001610305|gb|KXS14083.1|4.007e-3233.92NAD(P)-binding protein [Gonapodya prolifera JEL478... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4068rna4068Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications