EWM26706.1, cds4057 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|585108794|gb|EWM26706.1| (retinol dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
Query: 1 MIGQVEIMSTTVDIPSAPSKPEEKHEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNNLEDAAPFSKMLPAAAIHRE 381
MIGQVEIMSTTVDIPSAPSKPEEKHEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNNLEDAAPFSKMLPAAAIHRE
Sbjct: 1 MIGQVEIMSTTVDIPSAPSKPEEKHEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNNLEDAAPFSKMLPAAAIHRE 381
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|585108719|gb|EWM26631.1| (NAD(P)-binding domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 293.123 bits (749), Expect = 4.141e-92 Identity = 148/292 (50.68%), Postives = 191/292 (65.41%), Query Frame = 0
Query: 9 STTVDIPSAPSKPEEK---HEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGS-AAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDY 296
+T I A SKP+ K E LLS+LN+FL ++ YV YY +W FWLF+P V ++ LYD T KG RKP GPVLITGC SGFG L +AL+ GW VYA + F+ N V LI+DVT EE VRA A VD +P+EGLYALVNNAG + +GTTDWC +++++ HM++N++G +R+ K ALPLLKR R ++RI+NI S SGLLPGL +K Y ASKHAAE+WSNSLR E+RHF IQV VNP WH T A ++ L+ ++ + +Q DY
Sbjct: 30 ATAATIHGALSKPDGKTARKETLLSQLNSFLSAD-YVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|585108707|gb|EWM26619.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 250.366 bits (638), Expect = 2.404e-76 Identity = 135/346 (39.02%), Postives = 203/346 (58.67%), Query Frame = 0
Query: 11 TVDIPSAPSKPEEKHEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMA----PFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFE---HYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAA-RIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFV 348
+ +PS ++P + ++S+LN+F+H + Y+ I +Y +WLGFW+F+P V L +YDL TA+G+R+PCGPVL+TGC +GFG L +ALA + WKV A + + P + + N+ + LD++N+++++A + + P EGLYALVNN G +W ++D +K+HM+VN Y IR TKA LPLLK+Y R S RI+ +NS +G++PG P Y+ +KHA +AW +SL E + I+ V P WH+ + VF P VQE+YG Y + E + R WK ENV ++ AVTAE+ RP +VG+D RF+
Sbjct: 13 STSLPS--TRPRRTRQSIISKLNDFVHRD-YITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYP-EGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHD----VFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFL 350
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|585111118|gb|EWM28695.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 195.282 bits (495), Expect = 2.189e-55 Identity = 130/340 (38.24%), Postives = 181/340 (53.24%), Query Frame = 0
Query: 33 NNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPC--------GPVLITGCSSGFGLDLTMALAAQGWKVYA-CVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNNL 363
NN H ++ I +Y Y+ G WL P +AF ++ YD GF P + ITGC +GFG L + LA +G++VYA C+ + V+ ++LDVT+E QV+ A A VD ENPE GLYALVNNAG G DW L F+ M+VN++G + VTKA LPL+KR RI+ ++S +G+ G PL YSASKHA E +++SLRQE+R + I+V+ +NP +H T + L + P +Q YG+ Y + T + + P NV R M AVT R R QY VGLDA++ + P R+ L
Sbjct: 9 NNLCHIDLLEEWI-WYSYFTGAWLLGPFMAFLIVV----YDF--CSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPE-GLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKR------CKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKL 334
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|585111089|gb|EWM28666.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 190.274 bits (482), Expect = 1.917e-53 Identity = 118/337 (35.01%), Postives = 185/337 (54.90%), Query Frame = 0
Query: 28 LLSRLNNFLHSNIYVYIITY-YLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGP--VLITGCSSGFGLDLTMALAAQGWKVYA-CVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLAL-PRRI 359
L++ NN H ++ + Y + +W FW P++ L F + + +P V+ITGC +GFG L + L +G+KVYA C+ + + ++ +ILDVT E+QV + A + +P+ G++ALVNNAG G DW ++ F+ M+VNY+ + VTKA LP LK+ + RII ++S +G+ G P+ YS+SKHA E ++++LRQE+R + I V+ +NP +H T L A F AP +QE+YGE Y+ AE + P+NV R + A+T+ R + QY VG+DA+ + PFL + P R+
Sbjct: 3 LINWANNVAHIPVFEDMCYYNFFFWAWFWG--PLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQ-GIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKK------SKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGL-FPFLQIFPLRV 329
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|585106696|gb|EWM25060.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana]) HSP 1 Score: 182.956 bits (463), Expect = 3.440e-47 Identity = 117/337 (34.72%), Postives = 177/337 (52.52%), Query Frame = 0
Query: 28 LLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFR--KPCG-PVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNP-----NVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALP 356
+L+ +N+ +H I V I ++LY L P+ A ++ F + L A R +P G VLITGC +GFG DL +AL +GW+VYA +A +A ++ +++DVT + + + E+P++ L+A+V NAG G DW L ++ M+VN + I KA LPLLK + RI+N+ S +G+ G P Y+ASKHAAEA+S SLR E+ + I+V VNPS+H TR + E + + Q +YG Y + A ++ + + W P +V ++ A TA R QYIVG DA F +P + LP
Sbjct: 1210 MLNLMNDIMHLPI-VDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQ-LFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLK------ESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEY-LRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLP 1537
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|1210512056|dbj|GAX28911.1| (17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) [Fistulifera solaris]) HSP 1 Score: 146.362 bits (368), Expect = 1.517e-36 Identity = 93/295 (31.53%), Postives = 147/295 (49.83%), Query Frame = 0
Query: 72 YDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYA-CVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATV-----DGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGS-AAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQ---WFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALP 356
Y KG V+ITGC +GFG D+ + A G+ V+A C++ E+ + N+K ++VTN+E V A V + + L+AL+N AG G D+ L+ F+ MDVN++G +R KA LP+ K + ARI+NI S +GL+P Y+ASK+A + +S + R E F IQV +NPS+H+T ++ + P A +E+YGE ++ E T + +W+ ENV + + + + +VG DA+FV + P
Sbjct: 68 YSACDPKGHPTRESAVVITGCDTGFGRDVALRAAEAGYIVFAGCLKEESVTERNQLSNNIKAFTMNVTNDEHVEKAAQMVSRWLDETTTQQRILHALINMAGVGFCGNVDFMPLNLFQTSMDVNFFGTVRCCKAFLPIFKSQATSNTYNDARILNIVSMAGLVPTSVGTSAYAASKYAVQGFSTAFRLEAMGFGIQVATINPSFHETNIVTGLSTQVEKLCADLPGAKREEYGEEFL----EWLLTQTRIPLLVSWRAENVVQQTMNCLMNRSIPSEVVVGSDAKFVLVTLRIFP 358
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|1083712118|gb|OGH97648.1| (hypothetical protein A2039_04815 [Candidatus Melainabacteria bacterium GWA2_34_9]) HSP 1 Score: 143.28 bits (360), Expect = 2.111e-36 Identity = 90/277 (32.49%), Postives = 145/277 (52.35%), Query Frame = 0
Query: 87 VLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSN-NPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNN 362
+LITG SSG G + LA G++V A VR+E D + N N+ + ++VTN++ + AF V + GLY LVNNAG G ++ +D + +++N G + V + LPL+ R G+G RI+N +S +G P KG Y+ASK A E S+SLR+E+R + I V+++ P T + + PP ++ YG Y E + PE V + +L A+T++ + +Y+VG DA F++ LP +I+++
Sbjct: 4 ILITGASSGIGRISAITLAKNGFQVLAGVRKEEDAQKLRDENLNITPIFIEVTNQDSINEAFNKVSEILGDNGLYGLVNNAGIAVAGPLEFLPIDRLRHQLEINVIGQVAVIQKMLPLI-RKGKG-----RIVNTSSIAG-FTAFPFKGAYAASKFAVEGLSDSLRRELRPWRIPVSIIEPGVIKTPIWQKSINLVEDIVAEMPPEAEKYYGVVY-RNLLERTLKRVERSGAVPEQVAKAILHALTSKNPQTRYLVGKDAHFLSKILTKLPDKIVDS 272
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|637265663|ref|XP_003217067.2| (PREDICTED: retinol dehydrogenase 2 [Anolis carolinensis] >gi|1033393347|ref|XP_016846725.1| PREDICTED: retinol dehydrogenase 2 [Anolis carolinensis]) HSP 1 Score: 143.28 bits (360), Expect = 4.169e-36 Identity = 93/281 (33.10%), Postives = 150/281 (53.38%), Query Frame = 0
Query: 87 VLITGCSSGFGLDLTMALAAQGWKVYAC--VRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEH-YGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRV---MLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMN 361
V ITGC SGFG L L A+G +V A ++ A++ + + +K ILDVT+ E + AA V G ++GL+ LVNNAG + G +W + F ++VN GPI VT LPL+++ A R++N++S +G GGYS SK EA+S+SLR+++R F + V+++ PS T ++ P A++E YG+ Y+ ++ + + W+ +N+ V M A+T+ R +Y VG DA+ V +P LP +++
Sbjct: 32 VFITGCDSGFGNQLARQLDARGMRVLAACFTQKGAELLERATSERLKTTILDVTSTESIVAATEWVKGCTGKKGLWGLVNNAGLLYPIGPNEWLTKADFAKVLEVNLLGPIDVTLHLLPLVRK------AQGRVVNVSSIAGRFS--YCGGGYSPSKFGLEAFSDSLRRDLRPFGVSVSIIEPSGFSTNINEDANSSFRTIWSKLPTAIKEVYGQNYLRNISKTFFGAK----WEKKNLSLVVDCMEHALTSCYPRSRYAVGWDAKLVFIPLSYLPTSLVD 300
BLAST of EWM26706.1 vs. NCBI_GenBank
Match: gi|1176258357|ref|XP_020639010.1| (11-cis retinol dehydrogenase [Pogona vitticeps] >gi|1176258361|ref|XP_020639019.1| 11-cis retinol dehydrogenase [Pogona vitticeps]) HSP 1 Score: 143.28 bits (360), Expect = 4.431e-36 Identity = 107/321 (33.33%), Postives = 169/321 (52.65%), Query Frame = 0
Query: 54 FWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYA-CV-RREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEH-YGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRA----APPAVQEDYGEPYVVEAAEEAYTGRQWFTWK----PE--NVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMN 361
W + +V+ ++ + + D T F+ V ITGC SGFG L L +G++V A C+ ++ AD ++ P+++ +++DVTN E +R A V GE ++GL+ LVNNAG + G T+W ++D ++ M VN +G I V+ A LPLLKR A R++N +S G L GGY SK+ EA+S++LR+++ HF I+V++V P + T A+ + + A R P ++ YGE + Y Q F P+ V M A+ A+ R +Y G DA+FV +P LP I++
Sbjct: 1 MWCSVLLVSLLWIVIWFIRDRQTLSSFKDKY--VFITGCDSGFGNLLAKRLDKKGFRVLAGCLTQKGADNLQRASTPSLRTVLIDVTNSESIRKAVEWVKGEVGDKGLFGLVNNAGVANPIGPTEWMNVDDYRKVMAVNTFGVIEVSLAFLPLLKR------ARGRVVNTSSVLGRLSA--NGGGYCISKYTIEAFSDNLRRDLYHFGIKVSIVEPGFFKT--AVTNLDSIEASLRQLWDRMDPEARQSYGEDFF-----SNYLKVQKFIMNIICDPDLSKVTNCMEHALEAKHPRTRYSAGWDAKFVWLPASYLPAFIVD 304 The following BLAST results are available for this feature:
BLAST of EWM26706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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