EWM26664.1, cds4017 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|585108752|gb|EWM26664.1| (Tetratricopeptide-like helical protein [Nannochloropsis gaditana]) HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query: 1 MEELDQVLERGDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTLLQQAIGDASLQK 300
MEELDQVLERGDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTLLQQAIGDASLQK
Sbjct: 1 MEELDQVLERGDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTLLQQAIGDASLQK 300
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|1173940720|gb|OQR90052.1| (hypothetical protein THRCLA_09446 [Thraustotheca clavata]) HSP 1 Score: 207.223 bits (526), Expect = 6.085e-62 Identity = 116/276 (42.03%), Postives = 167/276 (60.51%), Query Frame = 0
Query: 9 ERGDSVA---ILRYLRHNRIRASAEVVQHGQDFVAKGKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYG--MCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPS 279
+ GD + +L ++R ++R V+ GQ+ +A+G LG W VYEQ LAALD+ + LA++ L+ +FP+S+RV RL GM EA+G YA A +YK + +P + +V KR V+L KAQG +AI + NE L+ FQ D+S W EL+ELYL G+ AAFCYEEL+L P +HV LAE+Y +GG ++LR+ARKH+A +++L+ N R G MC+ A+ K+ DK D +N L +LAV+KLK Y NP+
Sbjct: 12 DSGDKIKNLELLEFIRREKLRVPDVCVKVGQELIARG---GLGDALWTVYEQTLLAALDVNDENLADKCFLALKNKFPESSRVLRLEGMLMEAQGKYAQADALYKDILTKNPANMLVMKRQVALLKAQGRTEDAIAKLNEILRCFQTDASGWSELSELYLSIGNYKNAAFCYEELILLNPLDAFNHVRLAELYMTIGGQDNLRVARKHFAHALDLN--GTNTRGYVGLAMCTMTIAVT----KTGRPDKEDKELNARLHELAVNKLKKIYAE-NPT 277
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|1191667109|gb|OTG19077.1| (putative protein prenylyltransferase superfamily protein [Helianthus annuus]) HSP 1 Score: 202.986 bits (515), Expect = 2.922e-60 Identity = 119/291 (40.89%), Postives = 181/291 (62.20%), Query Frame = 0
Query: 1 MEELDQVLERGDSVA--ILRYLRHNRIRASAEVVQHGQDFVAKGKG-SSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTL 288
+++L+ +E G A L +R ++R S +V++HG + K S+LG E W +YEQV +AALD +A+ + +L+K+FPDS RVGRL M EA+G++A A + Y SL E +P D V+ R V+++KA+GD+ AI N+YL++F D AW+ELAE+Y+ +AAFCYEEL+LS P I HH+A A+V +GG E+L+ A+K+YA ++EL G N R+LYG+C A+ + T +EDK ++G LA L+ Y++++P L L+ TL
Sbjct: 10 LQQLENQVENGGGGAWEYLSLVRKLKLRRSDKVLKHGLTILNDPKKRSALGPEEWSLYEQVAIAALDCQCLDVAKDCIKVLQKKFPDSKRVGRLEAMLLEAKGSWAEAEKAYSSLLEDNPLDQVINMRRVAMSKARGDILGAIDWLNKYLEIFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPMIPQHHLAYADVLYTIGGLENLQTAKKYYASTIEL-TGGKNTRALYGICLCTCAIGQLTKGKNNEDKE---ISG----LAAAALEKDYKQISPDKLSLLGSTL 292
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|1012182292|ref|XP_015968513.1| (ER membrane protein complex subunit 2 [Arachis duranensis]) HSP 1 Score: 200.675 bits (509), Expect = 2.524e-59 Identity = 107/270 (39.63%), Postives = 168/270 (62.22%), Query Frame = 0
Query: 20 LRHNRIRASAEVVQHGQDFVAK-GKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTL 288
+R ++R S +V+ HG + K S+LG E W +YEQV +AA+D +A+ + +LRK+FPDS RVGRL + EA+G++ +A + Y SL E +P D + KR V++AKAQG++P AI+ N+YL++F D AW+ELAE+Y+ +AAFCYEEL+LS P++ +H+A A+V +GG E+L+ A+K+Y +++L G N R+L+G+C A+ + T + E+K + V LA L+ Y++ P LP + L
Sbjct: 31 VRKLKLRRSDKVLNHGLSILNNPSKRSALGPEEWTLYEQVAVAAMDCQSLDVAKDCIKVLRKKFPDSKRVGRLEALLLEAKGSWELAEKAYSSLLEDNPLDQTIHKRRVAMAKAQGNIPGAIEWLNKYLEIFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGLENLQTAKKYYTSTIDL-TGGKNTRALFGVCLCTSAITQVTKGKSKEEKEGSQVQS----LAAKMLEKDYKQRAPDKLPQLTTAL 295
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|1040923197|ref|XP_017223823.1| (PREDICTED: ER membrane protein complex subunit 2-like [Daucus carota subsp. sativus] >gi|1021024136|gb|KZM81924.1| hypothetical protein DCAR_029537 [Daucus carota subsp. sativus]) HSP 1 Score: 200.675 bits (509), Expect = 2.842e-59 Identity = 110/273 (40.29%), Postives = 173/273 (63.37%), Query Frame = 0
Query: 17 LRYLRHNRIRASAEVVQHGQDFVAK-GKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTL 288
L +R ++R +VV+HG + K S+LG + W +YEQV AA+D T +A+ + +L+K+FP S RVGRL + EA+G++A A + Y SL E +P D V+ KR V++AKAQG++ AI+R N+YL++F D AW+ELAE+Y+ +AAFCYEEL+L+ P I +H+A A+V +GG E++ A+++YA +++L G N+R+L G+C A+A+ + EDK + L LA L+ +Y++++P LPL+ TL
Sbjct: 28 LSLVRKLKLRRPNKVVKHGLSILNDPTKRSALGPDEWTLYEQVATAAMDCQCTDVAKDCIKILQKKFPGSKRVGRLEAILLEAKGSWAEADKAYASLLEENPLDQVILKRRVAMAKAQGNVSLAIERLNQYLEIFMADPDAWRELAEIYISLQMYKQAAFCYEELILAQPMIPLYHLAYADVLYTLGGLENILTAKRYYASTIDL-TGGKNVRALMGICLCTSAVAQLSKGRNKEDKDGS----ELHSLASTALEKNYKKISPDNLPLLTSTL 295
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|694996627|ref|XP_009394974.1| (PREDICTED: ER membrane protein complex subunit 2-A-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 200.29 bits (508), Expect = 3.377e-59 Identity = 118/289 (40.83%), Postives = 176/289 (60.90%), Query Frame = 0
Query: 1 MEELDQVLERGDSVA--ILRYLRHNRIRASAEVVQHGQDFVAKGKG-SSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDK--SDAAVNGALFKLAVDKLKSHYRRVNPSMLPLV 284
ME L+ +E G A L +R + R S +V++HG + + S LG E W +YEQV AA+D + +A+ + +L KQFP S R+GR+ GM E++G +A A +VY L + P D ++ KR V++AKAQGDL A+K N+YL++F D AW+ELAE+Y+ +AAFCYEEL+LS P++ +H+A AEV +GG E+L+ A+K+YA ++ L G N R+LYG+CS A+ + T E+K SD L LA + L+ Y++ P+ LPL+
Sbjct: 10 MERLESQVENGGGGAWEYLCLVRKLKARRSNKVLKHGLSILNDHRARSKLGAEEWTLYEQVAFAAMDCQQHDVAKDCIAVLSKQFPGSIRIGRVEGMLLESKGAWAEAEKVYARLLDDSPLDQIIHKRKVAMAKAQGDLSAAVKFLNKYLEIFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPPYHLAYAEVLYTIGGLENLQTAKKYYASTVAL-TGGKNTRALYGVCSCSVAIRQLTKGRNKEEKEMSD------LQTLAAEALQRDYKQRAPNKLPLL 291
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|1021524133|ref|XP_016205446.1| (ER membrane protein complex subunit 2 [Arachis ipaensis]) HSP 1 Score: 200.29 bits (508), Expect = 3.928e-59 Identity = 107/270 (39.63%), Postives = 169/270 (62.59%), Query Frame = 0
Query: 20 LRHNRIRASAEVVQHGQDFVAK-GKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTL 288
+R ++R S +V++HG + K S+LG E W +YEQV +AA+D +A+ + +LRK+FPDS RVGRL + EA+G++ +A + Y SL E +P D + KR V++AKAQG++P AI+ N+YL++F D AW+ELAE+Y+ +AAFCYEEL+LS P++ +H+A A+V +GG E+L+ A+K+Y +++L G N R+L+G+C A+ + T + E+K + V LA L+ Y++ P LP + L
Sbjct: 31 VRKLKLRRSDKVLKHGLSILNNPSKRSALGPEEWTLYEQVAVAAMDCQSLDVAKDCIKVLRKKFPDSKRVGRLEALLLEAKGSWELADKAYSSLLEDNPLDQTIHKRRVAMAKAQGNIPGAIEWLNKYLEIFMADHDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGLENLQTAKKYYTSTIDL-TGGKNTRALFGVCLCTSAITQVTKGKSKEEKEGSQVQS----LAAKVLEKDYKQRAPDKLPQLTTAL 295
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|302764144|ref|XP_002965493.1| (hypothetical protein SELMODRAFT_167610 [Selaginella moellendorffii] >gi|300166307|gb|EFJ32913.1| hypothetical protein SELMODRAFT_167610 [Selaginella moellendorffii]) HSP 1 Score: 198.749 bits (504), Expect = 1.262e-58 Identity = 108/274 (39.42%), Postives = 163/274 (59.49%), Query Frame = 0
Query: 11 GDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKG-SSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPL 283
GD L +R ++R S++V +HG + + + LG + W VYEQV +AALD A+ +G L K+FPDS RVGRL GM EA G++ A +VY S+ E HPTD + KR +++AKAQG+L A+ N+YL++F D W+ELA++YL +AAFCYEEL+L P+ H+ AE+ +GG E+L+ A+K+YA ++EL G N+R+LYG+C + + ++ ++K ++ V+ LA D +K YR P L
Sbjct: 20 GDVARYLALIRKLKLRRSSKVAKHGMELLRNSSARAKLGADVWTVYEQVAIAALDCQCLTAAKECIGALLKKFPDSTRVGRLEGMWFEARGSWQQAEKVYASILEEHPTDARILKRKIAMAKAQGNLMGAVDEMNKYLELFMADHECWKELADVYLALQMYKQAAFCYEELILVQPANALFHLGYAEILYTIGGLENLKTAKKYYASAIEL-SGGKNMRALYGVCLCAAGINQAKGRNVKDEKENSTVH----TLAADVIKREYRLKAPKKASL 288
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|502113541|ref|XP_004494683.1| (PREDICTED: ER membrane protein complex subunit 2 [Cicer arietinum]) HSP 1 Score: 198.749 bits (504), Expect = 1.480e-58 Identity = 110/279 (39.43%), Postives = 170/279 (60.93%), Query Frame = 0
Query: 11 GDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKG-SSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTL 288
G + L +R ++R S +V++HG + K S+LG E W +YEQV +AA+D +A+ LRK+FP+S RVGRL M EA+G++ +A + Y SL E +P D ++ KR V++AKAQG++ AI+ N+YL++F D AW+ELAE+YL +AAFCYEE++L+ P++ +H+A A+V +GG E+L+ A+K+YA +++L G N R+L+G+C A+A+ T EDK L LA L+ Y++ P LP + L
Sbjct: 22 GGAWEFLSLVRKLKVRRSDKVLKHGLSILNDPKQRSTLGSEEWTLYEQVAVAAMDCQSLDVAQDCTKALRKRFPESKRVGRLEAMLLEAKGSWDMAEKAYTSLLEDNPLDQIIHKRRVAMAKAQGNISGAIEWLNKYLEIFMADHDAWRELAEIYLSLQMYKQAAFCYEEVILAQPTVPLYHLAYADVLYTLGGLENLQTAKKYYASTIDL-TGGKNTRALFGVCLCTSAIAQLTKGKNKEDKE----GSQLHSLAAKALEKDYKQRAPDKLPQLTTAL 295
BLAST of EWM26664.1 vs. NCBI_GenBank
Match: gi|1173941543|gb|OQR90687.1| (hypothetical protein ACHHYP_05324 [Achlya hypogyna]) HSP 1 Score: 197.978 bits (502), Expect = 2.796e-58 Identity = 113/275 (41.09%), Postives = 167/275 (60.73%), Query Frame = 0
Query: 9 ERGDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYG--MCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSML 281
+R + +L ++R ++RA E V+ G+ +++G LG +AW VYEQ LAALD+ + L + L+K+FP+S+RV RL GM EA+G YA A +YK + +P + +V KR V+L +AQG +AI + N L+ FQ D++ W EL++LYL G+ AAFCYEEL+L P +H LAE+Y +GG ++LR ARKH+A ++EL+ +N RSL G MC+T A + KS DK D +N L + AV KL+ Y + + L
Sbjct: 15 DREKGLELLEFIRREKLRAPDESVKVGRALISRG---GLGDQAWTVYEQTLLAALDIHDLDLVDSCFLALKKKFPESSRVLRLEGMIMEAQGKYAQADALYKEILAKNPANMLVQKRQVALLRAQGRTEDAIVKLNAVLRCFQTDAAGWCELSDLYLSLGNYKHAAFCYEELILLNPLDAFNHTRLAELYVTIGGNDNLRAARKHFAHALELN--GNNTRSLVGLVMCTTAIA----STKSGRPDKEDRDLNSRLHQYAVAKLQGVYSELPTAAL 280 The following BLAST results are available for this feature:
BLAST of EWM26664.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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