EWM26717.1, cds4011 (CDS) Nannochloropsis gaditana

Overview
NameEWM26717.1
Unique Namecds4011
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:650263..650381 -
Alignment locationCM002462.1:649957..650097 -
Alignment locationCM002462.1:647847..649533 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26717.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g94.8228.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:650263..650381 -
CM002462.1supercontigCM002462.1:649957..650097 -
CM002462.1supercontigCM002462.1:647847..649533 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010617DUF1211_TMEM175
Homology
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|585108805|gb|EWM26717.1| (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana])

HSP 1 Score: 1320.45 bits (3416), Expect = 0.000e+0
Identity = 648/648 (100.00%), Postives = 648/648 (100.00%), Query Frame = 0
Query:    1 MNEPLLQRSNSDSALPTLGSWGMQSILVSGRMGRLQDSDRIMAFTDAILAIICTSCAVPLWSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648
            MNEPLLQRSNSDSALPTLGSWGMQSILVSGRMGRLQDSDRIMAFTDAILAIICTSCAVPLWSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI
Sbjct:    1 MNEPLLQRSNSDSALPTLGSWGMQSILVSGRMGRLQDSDRIMAFTDAILAIICTSCAVPLWSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648          
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|585108804|gb|EWM26716.1| (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana])

HSP 1 Score: 1139.41 bits (2946), Expect = 0.000e+0
Identity = 561/561 (100.00%), Postives = 561/561 (100.00%), Query Frame = 0
Query:   88 EIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648
            EIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI
Sbjct:    9 EIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 569          
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|585108806|gb|EWM26718.1| (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana])

HSP 1 Score: 1079.7 bits (2791), Expect = 0.000e+0
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0
Query:  115 MTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648
            MTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI
Sbjct:    1 MTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 534          
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|1005457162|ref|XP_015765710.1| (PREDICTED: endosomal/lysomomal potassium channel TMEM175-like [Acropora digitifera])

HSP 1 Score: 79.7221 bits (195), Expect = 4.386e-12
Identity = 83/347 (23.92%), Postives = 147/347 (42.36%), Query Frame = 0
Query:   39 DRIMAFTDAILAIICTSCAVP---LWSNGTRNFNP------VRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVI------LFVPAT-ATGHLLYLGLWACVLLLVGVAS-HWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGG-SVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILD 367
            +R+  F DA+ AI+ T   +P   L  N   N         V LV +   F ++  +WE H   F  L HVD+ L  +N++ +   T LPF   +       ++P     G +L L     V++L      + L    Q L    L        ++RD  LT  L    L     SL              K +     + ++AV+F   +  + L +  R  F+ +++ + P   ++F   +   RVE FSDGV++  AT L++++ +  L  ++  E  G       +WP  + YI  F ++ +L   H ++   I   N+ +L  N++    + F P +  +++
Sbjct:   11 NRLKCFNDAVFAIVSTILILPIRRLDENSDSNLEKLMKDRWVELVVYFMAFLVICSVWESHVHRFKILSHVDDILIWLNLISLMFTTFLPFGCALEGRYPGKYLPIVLICGDMLMLEALEVVIILYSFRRPYLLKEHLQELPQQHLK-------ERRDYMLTKKLINPLLYVLSVSL-------------SKTSSVTAWVLISAVIFTPCIHRF-LGIVFR-KFKAIRL-VEPEFDLMFGNYIDTERVECFSDGVFSIVATLLVLDITTEYLPNEQEVEKDGIDSAVLEMWPKFLTYIATFIIIGLLWFLHHSLYHGIRKMNQIMLVANNVSMSFIGFFPFIVALMN 334          
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|1016708466|ref|XP_007537807.2| (PREDICTED: endosomal/lysomomal potassium channel TMEM175 [Erinaceus europaeus])

HSP 1 Score: 71.633 bits (174), Expect = 2.203e-9
Identity = 86/355 (24.23%), Postives = 153/355 (43.10%), Query Frame = 0
Query:   33 GRLQDSDRIMAFTDAILAIICTSCAVPL----------WSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFV-PATATGHLLYLGLWACVLLLVGV----------ASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRP-GHIRVAAVLFV--VGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVL-SGLLRADEGAEGGGGQ---HGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFI 359
            G  Q S R+++F+D +L+II T   +P+          +  G +     R+  ++ TF I++  W  H + F  +  +D+ L  +N+  + ++T LPF F ++   P    G  L+     CV+ + GV            H LS   Q           ++G  +R +        +GLV  G +L        +L   +   F P  ++ +A V+F+  V    +W C   R+  R         S++  + A+ + RVE FSDGVYA  AT L++++    +    +  E  GG      G+  P  + Y   F  V +L  +H ++   +      +  +N+   LS+AF+
Sbjct:   61 GETQHSQRMLSFSDGLLSIIATVMILPVTHTEISPEQEFDKGVQKLLATRIAVYLMTFLIVTVAWAAHARLFQIVGKIDDTLALLNLACMMTITFLPFTFSLMVTFPEAPLGIFLFC---MCVVAIGGVQMLIVLYAFHCPHLLSPYVQ--------TSARRGLYRRHI--------LGLVLRGPALC-------LLAAGFSLFFYPVSYLLMATVIFLPYVSKATHW-CWG-RLTGRRQPPAPHVDSSLDLSEALSKERVEAFSDGVYAIVATLLILDICEDNVPDPRQVQERFGGSLLAALGAAGPRFLAYFGSFATVGLLWFTHHSLFLHVRRATPAMGLLNA---LSLAFV 384          
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|946809934|ref|XP_014388951.1| (PREDICTED: endosomal/lysomomal potassium channel TMEM175 [Myotis brandtii])

HSP 1 Score: 63.5438 bits (153), Expect = 5.191e-7
Identity = 89/364 (24.45%), Postives = 156/364 (42.86%), Query Frame = 0
Query:   36 QDSDRIMAFTDAILAIICTSCAVPL---------WSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFV-PATATGHLLYLGLWACVLLLVGVASH-----WLSSATQRLS-ALRLGVQEKKGWQQRDLALTLAL---FQVGLVTAGASLLARVEHLDILTDDYKKAFR-------PGHIRVAAVL-FVVGVLIYWLCLALRINFRILQMWLGPR-----SAVLFN----GAVPRVRVEIFSDGVYAAAATGLMIEVLSGLL---RADEGAEGGGGQHGGSVW-PSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFI 359
            Q S R+++F+DA+L+II T   +P+         +    +     R+  ++ TF I++  W  H + F  +  +D+ L  +N+  + ++T LP+ F ++   P    G  L+     CV+ +  V           +A++R   A+RL V  +  W Q   A          VG V  G    A+  HL +      +  R       PG +R AA+  +++   + +L  A +         LGPR     S   F       + + RVE FSDGVYA  AT L++++    +   +  E    G      SV+ P  + Y   F  V +L  +H ++   +    + +  +N+   LS+AF+
Sbjct:   33 QHSHRMLSFSDALLSIIATVMILPVTHTEISPEQFDRSIQKLLATRIAVYLMTFLIVTVAWAAHTRLFQVVGKIDDTLALLNLACMMTITFLPYTFSLMMAFPEVPLGIFLFC---VCVIAIGAVQVRPPPPGLPRAASRRCQRAVRLAV-PRALWAQLSWASARRWGCGVGVGCVMWGELPFAQRLHLRVFLPQRTRFPRPLLASTVPGGVRGAALWSYLLMATVIFLPYASKAASWCRGRLLGPREPPAPSVEFFTYDLQEPLSKERVEAFSDGVYAIVATLLILDICEDNVPDAKVVEERFQGSLVAALSVYGPQFLAYFGSFATVGLLWFAHHSLFLHVRKATQSMGLLNT---LSLAFV 389          
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|740035628|ref|WP_037885281.1| (DUF1211 domain-containing membrane protein [Streptomyces sp. NRRL S-646])

HSP 1 Score: 60.8474 bits (146), Expect = 6.574e-7
Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 0
Query:  268 RVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHG-GSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLL 392
            RVE FSDGV+A A T L++E+     +  E  E GG  H  G+ WPS   Y+  F V+ ++  +H  + + ++  +  L+ +N LV + VA +P  + +L        AS    A + LV  L+ L
Sbjct:    6 RVEAFSDGVFAIAITLLILEI-----KVPEVGEHGGLWHALGAQWPSYAAYVVSFLVIGIMWINHHQLFSYVARVDRTLMFLNLLVLMVVAAVPWPTAMLAEYLREDAASHVAAAVYSLVMVLMAL 126          
The following BLAST results are available for this feature:
BLAST of EWM26717.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585108805|gb|EWM26717.1|0.000e+0100.00hypothetical protein Naga_100001g94 [Nannochlorops... [more]
gi|585108804|gb|EWM26716.1|0.000e+0100.00hypothetical protein Naga_100001g94 [Nannochlorops... [more]
gi|585108806|gb|EWM26718.1|0.000e+0100.00hypothetical protein Naga_100001g94 [Nannochlorops... [more]
gi|1005457162|ref|XP_015765710.1|4.386e-1223.92PREDICTED: endosomal/lysomomal potassium channel T... [more]
gi|1016708466|ref|XP_007537807.2|2.203e-924.23PREDICTED: endosomal/lysomomal potassium channel T... [more]
gi|946809934|ref|XP_014388951.1|5.191e-724.45PREDICTED: endosomal/lysomomal potassium channel T... [more]
gi|740035628|ref|WP_037885281.1|6.574e-732.54DUF1211 domain-containing membrane protein [Strept... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4021rna4021Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications