EWM26717.1, cds4011 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|585108805|gb|EWM26717.1| (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana]) HSP 1 Score: 1320.45 bits (3416), Expect = 0.000e+0 Identity = 648/648 (100.00%), Postives = 648/648 (100.00%), Query Frame = 0
Query: 1 MNEPLLQRSNSDSALPTLGSWGMQSILVSGRMGRLQDSDRIMAFTDAILAIICTSCAVPLWSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648
MNEPLLQRSNSDSALPTLGSWGMQSILVSGRMGRLQDSDRIMAFTDAILAIICTSCAVPLWSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI
Sbjct: 1 MNEPLLQRSNSDSALPTLGSWGMQSILVSGRMGRLQDSDRIMAFTDAILAIICTSCAVPLWSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|585108804|gb|EWM26716.1| (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana]) HSP 1 Score: 1139.41 bits (2946), Expect = 0.000e+0 Identity = 561/561 (100.00%), Postives = 561/561 (100.00%), Query Frame = 0
Query: 88 EIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648
EIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI
Sbjct: 9 EIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 569
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|585108806|gb|EWM26718.1| (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana]) HSP 1 Score: 1079.7 bits (2791), Expect = 0.000e+0 Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0
Query: 115 MTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 648
MTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI
Sbjct: 1 MTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLLFLLMAALQAAPLAEAPDGINESAETLLSEMLGRPIACGTGIIPGNILASPADSPRSSQEIEKKDDVEDMLMPRRAPRLFQEPSCLAQGRGIDSNLLRRLQAIRDEYEIGSASILPVMAFFLTLLTASLQFAGETSPYTPAAFLLTFFVYTAEHRILRPRAARKIRKIQRQLQQHQQEQHGYPPFLPAKVSPSSKLETVREESLVSSVGESEEGAERLVGVMEGGEYKEEGDRHESRAVSGDLNRDKYVHFRDSAHI 534
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|1005457162|ref|XP_015765710.1| (PREDICTED: endosomal/lysomomal potassium channel TMEM175-like [Acropora digitifera]) HSP 1 Score: 79.7221 bits (195), Expect = 4.386e-12 Identity = 83/347 (23.92%), Postives = 147/347 (42.36%), Query Frame = 0
Query: 39 DRIMAFTDAILAIICTSCAVP---LWSNGTRNFNP------VRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVI------LFVPAT-ATGHLLYLGLWACVLLLVGVAS-HWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHGG-SVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILD 367
+R+ F DA+ AI+ T +P L N N V LV + F ++ +WE H F L HVD+ L +N++ + T LPF + ++P G +L L V++L + L Q L L ++RD LT L L SL K + + ++AV+F + + L + R F+ +++ + P ++F + RVE FSDGV++ AT L++++ + L ++ E G +WP + YI F ++ +L H ++ I N+ +L N++ + F P + +++
Sbjct: 11 NRLKCFNDAVFAIVSTILILPIRRLDENSDSNLEKLMKDRWVELVVYFMAFLVICSVWESHVHRFKILSHVDDILIWLNLISLMFTTFLPFGCALEGRYPGKYLPIVLICGDMLMLEALEVVIILYSFRRPYLLKEHLQELPQQHLK-------ERRDYMLTKKLINPLLYVLSVSL-------------SKTSSVTAWVLISAVIFTPCIHRF-LGIVFR-KFKAIRL-VEPEFDLMFGNYIDTERVECFSDGVFSIVATLLVLDITTEYLPNEQEVEKDGIDSAVLEMWPKFLTYIATFIIIGLLWFLHHSLYHGIRKMNQIMLVANNVSMSFIGFFPFIVALMN 334
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|1016708466|ref|XP_007537807.2| (PREDICTED: endosomal/lysomomal potassium channel TMEM175 [Erinaceus europaeus]) HSP 1 Score: 71.633 bits (174), Expect = 2.203e-9 Identity = 86/355 (24.23%), Postives = 153/355 (43.10%), Query Frame = 0
Query: 33 GRLQDSDRIMAFTDAILAIICTSCAVPL----------WSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFV-PATATGHLLYLGLWACVLLLVGV----------ASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRP-GHIRVAAVLFV--VGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVL-SGLLRADEGAEGGGGQ---HGGSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFI 359
G Q S R+++F+D +L+II T +P+ + G + R+ ++ TF I++ W H + F + +D+ L +N+ + ++T LPF F ++ P G L+ CV+ + GV H LS Q ++G +R + +GLV G +L +L + F P ++ +A V+F+ V +W C R+ R S++ + A+ + RVE FSDGVYA AT L++++ + + E GG G+ P + Y F V +L +H ++ + + +N+ LS+AF+
Sbjct: 61 GETQHSQRMLSFSDGLLSIIATVMILPVTHTEISPEQEFDKGVQKLLATRIAVYLMTFLIVTVAWAAHARLFQIVGKIDDTLALLNLACMMTITFLPFTFSLMVTFPEAPLGIFLFC---MCVVAIGGVQMLIVLYAFHCPHLLSPYVQ--------TSARRGLYRRHI--------LGLVLRGPALC-------LLAAGFSLFFYPVSYLLMATVIFLPYVSKATHW-CWG-RLTGRRQPPAPHVDSSLDLSEALSKERVEAFSDGVYAIVATLLILDICEDNVPDPRQVQERFGGSLLAALGAAGPRFLAYFGSFATVGLLWFTHHSLFLHVRRATPAMGLLNA---LSLAFV 384
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|946809934|ref|XP_014388951.1| (PREDICTED: endosomal/lysomomal potassium channel TMEM175 [Myotis brandtii]) HSP 1 Score: 63.5438 bits (153), Expect = 5.191e-7 Identity = 89/364 (24.45%), Postives = 156/364 (42.86%), Query Frame = 0
Query: 36 QDSDRIMAFTDAILAIICTSCAVPL---------WSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFV-PATATGHLLYLGLWACVLLLVGVASH-----WLSSATQRLS-ALRLGVQEKKGWQQRDLALTLAL---FQVGLVTAGASLLARVEHLDILTDDYKKAFR-------PGHIRVAAVL-FVVGVLIYWLCLALRINFRILQMWLGPR-----SAVLFN----GAVPRVRVEIFSDGVYAAAATGLMIEVLSGLL---RADEGAEGGGGQHGGSVW-PSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFI 359
Q S R+++F+DA+L+II T +P+ + + R+ ++ TF I++ W H + F + +D+ L +N+ + ++T LP+ F ++ P G L+ CV+ + V +A++R A+RL V + W Q A VG V G A+ HL + + R PG +R AA+ +++ + +L A + LGPR S F + + RVE FSDGVYA AT L++++ + + E G SV+ P + Y F V +L +H ++ + + + +N+ LS+AF+
Sbjct: 33 QHSHRMLSFSDALLSIIATVMILPVTHTEISPEQFDRSIQKLLATRIAVYLMTFLIVTVAWAAHTRLFQVVGKIDDTLALLNLACMMTITFLPYTFSLMMAFPEVPLGIFLFC---VCVIAIGAVQVRPPPPGLPRAASRRCQRAVRLAV-PRALWAQLSWASARRWGCGVGVGCVMWGELPFAQRLHLRVFLPQRTRFPRPLLASTVPGGVRGAALWSYLLMATVIFLPYASKAASWCRGRLLGPREPPAPSVEFFTYDLQEPLSKERVEAFSDGVYAIVATLLILDICEDNVPDAKVVEERFQGSLVAALSVYGPQFLAYFGSFATVGLLWFAHHSLFLHVRKATQSMGLLNT---LSLAFV 389
BLAST of EWM26717.1 vs. NCBI_GenBank
Match: gi|740035628|ref|WP_037885281.1| (DUF1211 domain-containing membrane protein [Streptomyces sp. NRRL S-646]) HSP 1 Score: 60.8474 bits (146), Expect = 6.574e-7 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 0
Query: 268 RVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQHG-GSVWPSLVNYIYCFHVVAVLHRSHQNIVAKISVFNERLLAINSLVCLSVAFIPTLSTILDPSWGHHPASLTTGAAFLLVASLLLL 392
RVE FSDGV+A A T L++E+ + E E GG H G+ WPS Y+ F V+ ++ +H + + ++ + L+ +N LV + VA +P + +L AS A + LV L+ L
Sbjct: 6 RVEAFSDGVFAIAITLLILEI-----KVPEVGEHGGLWHALGAQWPSYAAYVVSFLVIGIMWINHHQLFSYVARVDRTLMFLNLLVLMVVAAVPWPTAMLAEYLREDAASHVAAAVYSLVMVLMAL 126 The following BLAST results are available for this feature:
BLAST of EWM26717.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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