EWM26629.1, cds4001 (CDS) Nannochloropsis gaditana

Overview
NameEWM26629.1
Unique Namecds4001
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:624395..624590 +
Alignment locationCM002462.1:624635..624693 +
Alignment locationCM002462.1:624759..625001 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26629.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g105.8140.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:624395..624590 +
CM002462.1supercontigCM002462.1:624635..624693 +
CM002462.1supercontigCM002462.1:624759..625001 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26629.1 vs. NCBI_GenBank
Match: gi|585108717|gb|EWM26629.1| (hypothetical protein Naga_100001g105 [Nannochloropsis gaditana])

HSP 1 Score: 343.199 bits (879), Expect = 1.220e-119
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 
Query:    1 MIKSWERPTNIDASTVTCNPSMLLRNFPSDKNMHHGERTTVSIYRLTYRNLGVHSIVEALKPLCSPRFPRSRWCCRCRESQHKAVPKGVSFAHRTHIIIFGLLVMISRLKLLVDVFIPCWLKFFNPQILIKFLGFPQRGREHSRCECHVYDFASTFGTHGRRHGH 165
            MIKSWERPTNIDASTVTCNPSMLLRNFPSDKNMHHGERTTVSIYRLTYRNLGVHSIVEALKPLCSPRFPRSRWCCRCRESQHKAVPKGVSFAHRTHIIIFGLLVMISRLKLLVDVFIPCWLKFFNPQILIKFLGFPQRGREHSRCECHVYDFASTFGTHGRRHGH
Sbjct:    1 MIKSWERPTNIDASTVTCNPSMLLRNFPSDKNMHHGERTTVSIYRLTYRNLGVHSIVEALKPLCSPRFPRSRWCCRCRESQHKAVPKGVSFAHRTHIIIFGLLVMISRLKLLVDVFIPCWLKFFNPQILIKFLGFPQRGREHSRCECHVYDFASTFGTHGRRHGH 165
The following BLAST results are available for this feature:
BLAST of EWM26629.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108717|gb|EWM26629.1|1.220e-119100.00hypothetical protein Naga_100001g105 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4011rna4011Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications