EWM26582.1, cds3983 (CDS) Nannochloropsis gaditana

Overview
NameEWM26582.1
Unique Namecds3983
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:580953..581173 -
Alignment locationCM002462.1:580653..580832 -
Alignment locationCM002462.1:579320..580544 -

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Properties
Property NameValue
Protein idEWM26582.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g126.8093.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:580953..581173 -
CM002462.1supercontigCM002462.1:580653..580832 -
CM002462.1supercontigCM002462.1:579320..580544 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26582.1 vs. NCBI_GenBank
Match: gi|585108670|gb|EWM26582.1| (hypothetical protein Naga_100001g126 [Nannochloropsis gaditana])

HSP 1 Score: 1108.98 bits (2867), Expect = 0.000e+0
Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0 
Query:    1 MESSSGKCGYDLIEIVMDLIVSSRFFAALATQDPHAAVQRLQNRLREQKPASGELSVLDNLISPFLLLAAAEKMHNLGVDLIDSCVKPEAMYADVDKDLGTLLQLFDTKSTQSLATLLRNMRLVVGLRLWLCRWEGLRKEEPPNFMLHWRDLVSAEAETVALSLQSLVLMNSYPYQFLSVVAKLVALRAKLLRWKAATAAHGPASARGVAVGETRLRVLIRQFYHLVYKLPFRFDKIADQVMDLSQYNTEILGLCGTLDSPFQYSSPRRDRADGGKTETSSCNPYMDLIVDFLLSYGPTAQICVAIFLSSKGSGTGEASVTRGLEENCSYALPVGPDEEIPSSPQRKRPDRRDFLPVFSMTSFQAATGGRRSDSEHPPPMLSSLSSSLADAAIPRLNSGAVSSFSSGLQPDSRSQIAEDGKQCLVGEGGLPHWFWDLCRCSGLWPAIQGRIPEGGAQRFSLLGVGSKEHGTCTPSAPMDGTFIHQSGRTMAYSYFVAHISPWERLVVAFGDRTRPATDRVVLTFLMAALSILKDSVAFRLL 541
            MESSSGKCGYDLIEIVMDLIVSSRFFAALATQDPHAAVQRLQNRLREQKPASGELSVLDNLISPFLLLAAAEKMHNLGVDLIDSCVKPEAMYADVDKDLGTLLQLFDTKSTQSLATLLRNMRLVVGLRLWLCRWEGLRKEEPPNFMLHWRDLVSAEAETVALSLQSLVLMNSYPYQFLSVVAKLVALRAKLLRWKAATAAHGPASARGVAVGETRLRVLIRQFYHLVYKLPFRFDKIADQVMDLSQYNTEILGLCGTLDSPFQYSSPRRDRADGGKTETSSCNPYMDLIVDFLLSYGPTAQICVAIFLSSKGSGTGEASVTRGLEENCSYALPVGPDEEIPSSPQRKRPDRRDFLPVFSMTSFQAATGGRRSDSEHPPPMLSSLSSSLADAAIPRLNSGAVSSFSSGLQPDSRSQIAEDGKQCLVGEGGLPHWFWDLCRCSGLWPAIQGRIPEGGAQRFSLLGVGSKEHGTCTPSAPMDGTFIHQSGRTMAYSYFVAHISPWERLVVAFGDRTRPATDRVVLTFLMAALSILKDSVAFRLL
Sbjct:    1 MESSSGKCGYDLIEIVMDLIVSSRFFAALATQDPHAAVQRLQNRLREQKPASGELSVLDNLISPFLLLAAAEKMHNLGVDLIDSCVKPEAMYADVDKDLGTLLQLFDTKSTQSLATLLRNMRLVVGLRLWLCRWEGLRKEEPPNFMLHWRDLVSAEAETVALSLQSLVLMNSYPYQFLSVVAKLVALRAKLLRWKAATAAHGPASARGVAVGETRLRVLIRQFYHLVYKLPFRFDKIADQVMDLSQYNTEILGLCGTLDSPFQYSSPRRDRADGGKTETSSCNPYMDLIVDFLLSYGPTAQICVAIFLSSKGSGTGEASVTRGLEENCSYALPVGPDEEIPSSPQRKRPDRRDFLPVFSMTSFQAATGGRRSDSEHPPPMLSSLSSSLADAAIPRLNSGAVSSFSSGLQPDSRSQIAEDGKQCLVGEGGLPHWFWDLCRCSGLWPAIQGRIPEGGAQRFSLLGVGSKEHGTCTPSAPMDGTFIHQSGRTMAYSYFVAHISPWERLVVAFGDRTRPATDRVVLTFLMAALSILKDSVAFRLL 541
The following BLAST results are available for this feature:
BLAST of EWM26582.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108670|gb|EWM26582.1|0.000e+0100.00hypothetical protein Naga_100001g126 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3993rna3993Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications