EWM26770.1, cds3971 (CDS) Nannochloropsis gaditana

Overview
NameEWM26770.1
Unique Namecds3971
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:548997..554614 +
Alignment locationCM002462.1:554670..554916 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26770.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g139.8281.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:548997..554614 +
CM002462.1supercontigCM002462.1:554670..554916 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26770.1 vs. NCBI_GenBank
Match: gi|585108858|gb|EWM26770.1| (hypothetical protein Naga_100001g139 [Nannochloropsis gaditana])

HSP 1 Score: 4037.26 bits (10469), Expect = 0.000e+0
Identity = 1954/1954 (100.00%), Postives = 1954/1954 (100.00%), Query Frame = 0 
Query:    1 MKGATLGYTSHSRKSGDGSGKTSSKLMKEAGSWVADGEEAADVISTREKVVREARKRGTPKDVESVAIELLAREQHEACWLRQEKASLLAQLERARRKAGHLQSQLSGSMQESQSKKLLDSRLLSRRLSLRDTDEAKSVVDLIRAIHSYGAESAAGGLPPAEGSTVALDQVQAREGRRNLNRALRCLVMDNFCHVNTCIAEVVKFTDRQYQRESALNDQDAGLEPLNMQMVFVEGESLIFRVMGMRLQPRDVYSLCSLEEDLPDAGWGLKTLLAVSDIPVIISTPFQLRLDSAERGPRGVLCPEWVASLDAETPQGEAIIPPSYRARIKDNCTFIYAPLRESAKELLRSADMEPFEGLALAFLERARKLDMMLVSYEGPAEVKVVRNIQHEVELRPTCVPEEGKATGATRLAALKSSVRLVAHRVADCVVRCSKSTRIPDRNHQEDGQSGTSLYRLHEFQIALESSEGHGTPARTQIALAFPLGADGFPITEDIRRRKHHGNVHTEFIYCQMPVPCAGKLPFALQADFDMTSDTLGLHPTSSWNRWLLSCSVHLFVIATIADPTLCEAVDRYTPRIEEMPKGGLWSGLWELLDRLLQRHVRVRTESGLMVSRAQAVLRPPSLSSAFISDALLQEVTGGRKHFVDAATLDASTVKGDAQGEGRVCDLDIVLECVARLVAKSQWGRDASTLQQLWRFVAEQMAEDRKDVTPTSRRLLRTLPLYPVRGRGMRAFEGATPLFFGLDRKVRVALDTCGPHVRAEVAPELDFDCLRGSRGAEYTDLLKHAIQAIGIKEAKIEDLQSVLRRLLTQKQVLHPPSTPNEISNQGPVSMVNSDMFWALRSLVVEGMGYASLQEFVGNKSLSVPVLRLQSDGALGRRTTDLNVADASIGRFVTPCFLGVSLTRTPEDAVALLKTAASWTQDLDNHHVGDLLSAPTSATKSWGMMLQWEDCVRRELKVDGGTNRRWQGFFQNIISPQTLVDEAMKGLVSPTTTLADRQAFSGLLQLYKERYPLVFQEVRAAHRVSSARFLEILQDPLFSQNAQKFLKLSQGILDACLELVVDAKYDVSTHFRKELMALLPMPETEECPEICQLQDLVYYNKVDVDSPHTVALVMHVLTRQLVQHGHLVDFEPQDFPSSATHETLKVSPPGQALKITKKGSEKWAFLLKALFWKALENMTRSYHQVGSSGDTKQSGRNVVSQEGELVLLEDYCRHYGVWAASLGALCNGAPACYPLRYAVWTLEDPISSLVVESAHAKNMSVTVIALDKEIGDSLGPDQDGSSDIVHRLFVDTLGVSEGRIRKRYLLMLQEALERWSHVAGPMPRDVEALYRALAVAAGLAHSSSASQVDPDGTPETRIRTKNAAVCFEFSTIPVLDMNFKVTSLTVLSAGAAAVAAASEDFLSGRVLHMRPNGGGASNLCVLGNGNIAKAGPQPLVGVAASGDSDDSALDWFYRDFFPSRCLHPAIFSLLKQLDPVLLPRLAIAKPRPSFLESYGDTTSTMVSVLRAMKLDVVNAARLLCEVYAGSSLPHTELARYWANVIELRDLVLAELWKAEGQDRNEELIETVRTSLRLPLCAKTQPPGHGAGGSRDRRAPVPMANALQRAENQYPIYLGSLLGIDLEVSDKHHEQISGMVKHPGTTRESSWHRASRAEDGFTKVEESCYWERFLLALGVVPLTEAQLPLIPTQVLNKVFLALAKFNGLLNSTEPTVASKYNIWHTYHVLYRAVDGNMYLTRYKGLRSATAPGTENCGGQSFHHTALTGTGTVTTSAHKQQQHPQQVNEEPQSQSQQQHQQQQQQQQQTTATSQAATNGTFSYYGTSALPSVSPYLPTSSYPFSVASSSYGTGTAPRPPPVELHTGFAPPPVKRQRSPACSHAPTQHNSKTQIASIRPKPLVWCLQCPPSLHHRSNRRRERSRRVRSKTDRILFAFDWLLITDRKVYEHSFNHTKEKTRIRL 1954
            MKGATLGYTSHSRKSGDGSGKTSSKLMKEAGSWVADGEEAADVISTREKVVREARKRGTPKDVESVAIELLAREQHEACWLRQEKASLLAQLERARRKAGHLQSQLSGSMQESQSKKLLDSRLLSRRLSLRDTDEAKSVVDLIRAIHSYGAESAAGGLPPAEGSTVALDQVQAREGRRNLNRALRCLVMDNFCHVNTCIAEVVKFTDRQYQRESALNDQDAGLEPLNMQMVFVEGESLIFRVMGMRLQPRDVYSLCSLEEDLPDAGWGLKTLLAVSDIPVIISTPFQLRLDSAERGPRGVLCPEWVASLDAETPQGEAIIPPSYRARIKDNCTFIYAPLRESAKELLRSADMEPFEGLALAFLERARKLDMMLVSYEGPAEVKVVRNIQHEVELRPTCVPEEGKATGATRLAALKSSVRLVAHRVADCVVRCSKSTRIPDRNHQEDGQSGTSLYRLHEFQIALESSEGHGTPARTQIALAFPLGADGFPITEDIRRRKHHGNVHTEFIYCQMPVPCAGKLPFALQADFDMTSDTLGLHPTSSWNRWLLSCSVHLFVIATIADPTLCEAVDRYTPRIEEMPKGGLWSGLWELLDRLLQRHVRVRTESGLMVSRAQAVLRPPSLSSAFISDALLQEVTGGRKHFVDAATLDASTVKGDAQGEGRVCDLDIVLECVARLVAKSQWGRDASTLQQLWRFVAEQMAEDRKDVTPTSRRLLRTLPLYPVRGRGMRAFEGATPLFFGLDRKVRVALDTCGPHVRAEVAPELDFDCLRGSRGAEYTDLLKHAIQAIGIKEAKIEDLQSVLRRLLTQKQVLHPPSTPNEISNQGPVSMVNSDMFWALRSLVVEGMGYASLQEFVGNKSLSVPVLRLQSDGALGRRTTDLNVADASIGRFVTPCFLGVSLTRTPEDAVALLKTAASWTQDLDNHHVGDLLSAPTSATKSWGMMLQWEDCVRRELKVDGGTNRRWQGFFQNIISPQTLVDEAMKGLVSPTTTLADRQAFSGLLQLYKERYPLVFQEVRAAHRVSSARFLEILQDPLFSQNAQKFLKLSQGILDACLELVVDAKYDVSTHFRKELMALLPMPETEECPEICQLQDLVYYNKVDVDSPHTVALVMHVLTRQLVQHGHLVDFEPQDFPSSATHETLKVSPPGQALKITKKGSEKWAFLLKALFWKALENMTRSYHQVGSSGDTKQSGRNVVSQEGELVLLEDYCRHYGVWAASLGALCNGAPACYPLRYAVWTLEDPISSLVVESAHAKNMSVTVIALDKEIGDSLGPDQDGSSDIVHRLFVDTLGVSEGRIRKRYLLMLQEALERWSHVAGPMPRDVEALYRALAVAAGLAHSSSASQVDPDGTPETRIRTKNAAVCFEFSTIPVLDMNFKVTSLTVLSAGAAAVAAASEDFLSGRVLHMRPNGGGASNLCVLGNGNIAKAGPQPLVGVAASGDSDDSALDWFYRDFFPSRCLHPAIFSLLKQLDPVLLPRLAIAKPRPSFLESYGDTTSTMVSVLRAMKLDVVNAARLLCEVYAGSSLPHTELARYWANVIELRDLVLAELWKAEGQDRNEELIETVRTSLRLPLCAKTQPPGHGAGGSRDRRAPVPMANALQRAENQYPIYLGSLLGIDLEVSDKHHEQISGMVKHPGTTRESSWHRASRAEDGFTKVEESCYWERFLLALGVVPLTEAQLPLIPTQVLNKVFLALAKFNGLLNSTEPTVASKYNIWHTYHVLYRAVDGNMYLTRYKGLRSATAPGTENCGGQSFHHTALTGTGTVTTSAHKQQQHPQQVNEEPQSQSQQQHQQQQQQQQQTTATSQAATNGTFSYYGTSALPSVSPYLPTSSYPFSVASSSYGTGTAPRPPPVELHTGFAPPPVKRQRSPACSHAPTQHNSKTQIASIRPKPLVWCLQCPPSLHHRSNRRRERSRRVRSKTDRILFAFDWLLITDRKVYEHSFNHTKEKTRIRL
Sbjct:    1 MKGATLGYTSHSRKSGDGSGKTSSKLMKEAGSWVADGEEAADVISTREKVVREARKRGTPKDVESVAIELLAREQHEACWLRQEKASLLAQLERARRKAGHLQSQLSGSMQESQSKKLLDSRLLSRRLSLRDTDEAKSVVDLIRAIHSYGAESAAGGLPPAEGSTVALDQVQAREGRRNLNRALRCLVMDNFCHVNTCIAEVVKFTDRQYQRESALNDQDAGLEPLNMQMVFVEGESLIFRVMGMRLQPRDVYSLCSLEEDLPDAGWGLKTLLAVSDIPVIISTPFQLRLDSAERGPRGVLCPEWVASLDAETPQGEAIIPPSYRARIKDNCTFIYAPLRESAKELLRSADMEPFEGLALAFLERARKLDMMLVSYEGPAEVKVVRNIQHEVELRPTCVPEEGKATGATRLAALKSSVRLVAHRVADCVVRCSKSTRIPDRNHQEDGQSGTSLYRLHEFQIALESSEGHGTPARTQIALAFPLGADGFPITEDIRRRKHHGNVHTEFIYCQMPVPCAGKLPFALQADFDMTSDTLGLHPTSSWNRWLLSCSVHLFVIATIADPTLCEAVDRYTPRIEEMPKGGLWSGLWELLDRLLQRHVRVRTESGLMVSRAQAVLRPPSLSSAFISDALLQEVTGGRKHFVDAATLDASTVKGDAQGEGRVCDLDIVLECVARLVAKSQWGRDASTLQQLWRFVAEQMAEDRKDVTPTSRRLLRTLPLYPVRGRGMRAFEGATPLFFGLDRKVRVALDTCGPHVRAEVAPELDFDCLRGSRGAEYTDLLKHAIQAIGIKEAKIEDLQSVLRRLLTQKQVLHPPSTPNEISNQGPVSMVNSDMFWALRSLVVEGMGYASLQEFVGNKSLSVPVLRLQSDGALGRRTTDLNVADASIGRFVTPCFLGVSLTRTPEDAVALLKTAASWTQDLDNHHVGDLLSAPTSATKSWGMMLQWEDCVRRELKVDGGTNRRWQGFFQNIISPQTLVDEAMKGLVSPTTTLADRQAFSGLLQLYKERYPLVFQEVRAAHRVSSARFLEILQDPLFSQNAQKFLKLSQGILDACLELVVDAKYDVSTHFRKELMALLPMPETEECPEICQLQDLVYYNKVDVDSPHTVALVMHVLTRQLVQHGHLVDFEPQDFPSSATHETLKVSPPGQALKITKKGSEKWAFLLKALFWKALENMTRSYHQVGSSGDTKQSGRNVVSQEGELVLLEDYCRHYGVWAASLGALCNGAPACYPLRYAVWTLEDPISSLVVESAHAKNMSVTVIALDKEIGDSLGPDQDGSSDIVHRLFVDTLGVSEGRIRKRYLLMLQEALERWSHVAGPMPRDVEALYRALAVAAGLAHSSSASQVDPDGTPETRIRTKNAAVCFEFSTIPVLDMNFKVTSLTVLSAGAAAVAAASEDFLSGRVLHMRPNGGGASNLCVLGNGNIAKAGPQPLVGVAASGDSDDSALDWFYRDFFPSRCLHPAIFSLLKQLDPVLLPRLAIAKPRPSFLESYGDTTSTMVSVLRAMKLDVVNAARLLCEVYAGSSLPHTELARYWANVIELRDLVLAELWKAEGQDRNEELIETVRTSLRLPLCAKTQPPGHGAGGSRDRRAPVPMANALQRAENQYPIYLGSLLGIDLEVSDKHHEQISGMVKHPGTTRESSWHRASRAEDGFTKVEESCYWERFLLALGVVPLTEAQLPLIPTQVLNKVFLALAKFNGLLNSTEPTVASKYNIWHTYHVLYRAVDGNMYLTRYKGLRSATAPGTENCGGQSFHHTALTGTGTVTTSAHKQQQHPQQVNEEPQSQSQQQHQQQQQQQQQTTATSQAATNGTFSYYGTSALPSVSPYLPTSSYPFSVASSSYGTGTAPRPPPVELHTGFAPPPVKRQRSPACSHAPTQHNSKTQIASIRPKPLVWCLQCPPSLHHRSNRRRERSRRVRSKTDRILFAFDWLLITDRKVYEHSFNHTKEKTRIRL 1954
The following BLAST results are available for this feature:
BLAST of EWM26770.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108858|gb|EWM26770.1|0.000e+0100.00hypothetical protein Naga_100001g139 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3981rna3981Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications