EWM26753.1, cds3970 (CDS) Nannochloropsis gaditana

Overview
NameEWM26753.1
Unique Namecds3970
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:548029..548535 -
Alignment locationCM002462.1:547869..547934 -
Alignment locationCM002462.1:547706..547796 -
Alignment locationCM002462.1:547535..547602 -
Alignment locationCM002462.1:547291..547402 -
Alignment locationCM002462.1:547008..547189 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26753.1
Productphosphoinositol transporter
Orig transcript idgnl|cribi|Naga_100001g140.8264.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:548029..548535 -
CM002462.1supercontigCM002462.1:547869..547934 -
CM002462.1supercontigCM002462.1:547706..547796 -
CM002462.1supercontigCM002462.1:547535..547602 -
CM002462.1supercontigCM002462.1:547291..547402 -
CM002462.1supercontigCM002462.1:547008..547189 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011074CRAL/TRIO_N_dom
IPR001251CRAL-TRIO_dom
Homology
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|585108841|gb|EWM26753.1| (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 714.531 bits (1843), Expect = 0.000e+0
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query:    1 MPATVEGTGTQSMVPSALRDPPGSSAEVIGAFPNPQSSKVIHDLTHQAPVTGATPSSVQSELAAALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEMVEG 341
            MPATVEGTGTQSMVPSALRDPPGSSAEVIGAFPNPQSSKVIHDLTHQAPVTGATPSSVQSELAAALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEMVEG
Sbjct:    1 MPATVEGTGTQSMVPSALRDPPGSSAEVIGAFPNPQSSKVIHDLTHQAPVTGATPSSVQSELAAALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEMVEG 341          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|585110946|gb|EWM28528.1| (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 360.147 bits (923), Expect = 8.055e-117
Identity = 165/264 (62.50%), Postives = 206/264 (78.03%), Query Frame = 0
Query:   77 NDHLATSSNLAKKVETPDPDKP-NQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEMV 339
            N  + T  ++  +    + ++P  QRFIDGCLGDM EA RRW +T +WR+E+GTD IL++P  +FDLIK  YP WYC +G  G PVY+ERSGQVDQ RMR AGCG++EL+ HY+ +TEFC+ +L+P ET KTIT+  V+GVGIRDLAGEAFDFLRRSIHLI EHYPERS VIMI  AP+WF+VLWKIIRP++N RTQ K KI SKKET + +KEF+  E IPVEYGG L++ D  D+ R +SP+EV +RE VLAVN++HGVEMV
Sbjct:  346 NGRVGTPGSVMGRGAADEEERPLPQRFIDGCLGDMTEAMRRWNLTCEWRREYGTDGILDEPQPYFDLIKQCYPSWYCGEGINGDPVYWERSGQVDQPRMRVAGCGIDELLRHYVMVTEFCWVKLYPDETKKTITVFSVEGVGIRDLAGEAFDFLRRSIHLISEHYPERSAVIMITNAPSWFAVLWKIIRPMVNERTQKKVKIVSKKETLECLKEFIPEENIPVEYGGKLRFGDGVDTARWKSPQEVALREHVLAVNKKHGVEMV 609          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|585112878|gb|EWM30219.1| (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 219.164 bits (557), Expect = 1.130e-62
Identity = 101/189 (53.44%), Postives = 130/189 (68.78%), Query Frame = 0
Query:   89 KVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKI 277
             V  P PD    RFI+GC GDM EA+RRWRITL WRK FGTD ILE+ H +FDL+K A P +YC     G PVYYERSGQ D    +A   G++ +V+ Y+  TEF +  LHP ETA+T+TI DV+G+ + D+AG+  +F+RR+ H++ EHYPER  VI+I     WFS +WKIIRPL+N  TQ K K+
Sbjct:  413 NVLPPIPD----RFINGCFGDMAEAERRWRITLAWRKTFGTDTILEREHPYFDLVKQALPAFYCGTATDGNPVYYERSGQTDL--AKAKEVGLDWMVYSYVHSTEFVFKVLHPRETARTVTIFDVEGLSLGDIAGDPLEFIRRATHVMQEHYPERCRVIIICNCTGWFSFVWKIIRPLVNETTQQKVKV 595          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|298712383|emb|CBJ33167.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 194.897 bits (494), Expect = 2.014e-56
Identity = 107/287 (37.28%), Postives = 164/287 (57.14%), Query Frame = 0
Query:   52 GATPSSVQSELAAALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEM 338
            G+TP +V   + AA + SS+  S      AT+S LA+     D + P  R++ G  GD+ EA+RRW  TL+WR+E   D IL++    FD+IK  YPH+Y    + G  VYYE  G++D  ++R  G  ++ L  HY+++TEF + +L  +   K  T +D++G  +   AGE  +FL RS  ++G HYPERS  I I+ AP WFSV+WK + P ++  T+AK  +C      + + E +D E +P + GG      Q  +   Q P+E++M E V+ V +  G+EM
Sbjct:   28 GSTPEAV---VTAATNGSSNSCSS-----ATTSELAEDGYPKDMEIP-IRYVKGMEGDVVEARRRWIATLKWREEEKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSVVYYEIPGKIDLNKLRENGLDMDSLCRHYVYITEFLWKELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSYKIFILNAPWWFSVVWKFVTPFVHPNTRAKVVVCGGN-FLEKMGELIDLENVPQDVGG------QDPTPPLQGPQELQMHEHVVKVLKEKGMEM 298          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|1214702632|gb|OWZ14787.1| (SEC14 cytosolic factor [Phytophthora megakarya])

HSP 1 Score: 197.593 bits (501), Expect = 6.261e-54
Identity = 88/238 (36.97%), Postives = 145/238 (60.92%), Query Frame = 0
Query:   65 ALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGG 302
            A+ D++S VS  N   ++ +   + +  P    P  RFI G  GD E+   R+  TL+WRKE   D IL  PH  F+ IK  YP ++  + R GQPVYYER G++    ++  G  +++L+ HY+++TE+ +  + P+++ ++IT+LDV G+G+ DL GE  DF++R+    G HYPERS  I I+  P WF+++W++++PLI+  T+ K  +       + ++  +DPE IP ++GG
Sbjct:  450 AMSDTASPVSDLNADTSSETTEIQAISGPIAFSP--RFIAGEKGDAEKGHARFLATLEWRKENDIDNILVTPHPNFETIKQYYPQYFHGRTREGQPVYYERPGKIQLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDPENIPSDFGG 685          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|695396344|ref|XP_009521431.1| (hypothetical protein PHYSODRAFT_479932 [Phytophthora sojae] >gi|348686328|gb|EGZ26143.1| hypothetical protein PHYSODRAFT_479932 [Phytophthora sojae])

HSP 1 Score: 195.282 bits (495), Expect = 5.245e-53
Identity = 87/238 (36.55%), Postives = 145/238 (60.92%), Query Frame = 0
Query:   65 ALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGG 302
            A+ +++S VS     + T +   +   +  P   + RFI G  GD+E+ + R+  TLQWRKE   D IL  PH  F++IK  YP ++  + R G PVYYER G++D   ++  G  +++L+ HY++MTE+ +  + P ++ ++IT+LDV G+G+ DL GE  DF++R+    G HYPERS  I I+  P WF+++W++++PLI+  T+ K  +       + ++  +D E IP ++GG
Sbjct:  448 AVSETASPVSDVTTDMTTETATPENAISGGPIAFSPRFIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPDDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDMENIPSDFGG 685          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|953497210|emb|CEG41519.1| (sec14 cytosolic [Plasmopara halstedii])

HSP 1 Score: 191.045 bits (484), Expect = 7.275e-52
Identity = 79/202 (39.11%), Postives = 131/202 (64.85%), Query Frame = 0
Query:  101 RFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGG 302
            RFI G  GD E+ + R+  TL+WRKE   D IL  PH  F++IK +YP ++  + R G PVYYER G++D   ++  G  +++L+ HY+++TE+ +  + P++  ++IT+LDV G+G+ DL GE  DF++R+    GEHYPERS  I I+  P WF+++W++++P+I+  T+ K  +       + ++  +D E IP ++GG
Sbjct:  416 RFIAGEKGDEEKGRARYLATLKWRKENNIDNILVTPHPNFEIIKRSYPQYFHGRTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDLGRSITVLDVSGIGMYDLGGEVLDFIKRASAFTGEHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGG 617          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|299469886|emb|CBN76740.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 194.512 bits (493), Expect = 9.342e-52
Identity = 95/233 (40.77%), Postives = 149/233 (63.95%), Query Frame = 0
Query:  101 RFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPS-ETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICS--KKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAV 330
            R++ GC GD  EA+RRWR+TL+WR +   DE+L +P   F+LIK  YPH+   + R G PV+ E  G++D   +R+AG   E L  HY+++TE+ +  L P  E  + +T+LDVQG+G+RDLAGEA  F++++  ++ +HY ERS  + IV AP++FS++W++IRP++N RTQAK  I +   K+    + E + PE +P +YGG             +S EE+ +R +V ++
Sbjct:  306 RYLRGCAGDPVEAERRWRLTLEWRAKERIDEVLREPQPHFELIKRHYPHYIHRRARNGCPVWIELPGRIDLPAIRSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGMRDLAGEALGFVKQATAIVQDHYVERSNRMFIVNAPSYFSLIWRVIRPMLNERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLG------ESEEELDLRTYVASI 532          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|301112276|ref|XP_002905217.1| (SEC14 cytosolic factor, putative [Phytophthora infestans T30-4] >gi|262095547|gb|EEY53599.1| SEC14 cytosolic factor, putative [Phytophthora infestans T30-4])

HSP 1 Score: 189.889 bits (481), Expect = 3.964e-51
Identity = 85/238 (35.71%), Postives = 142/238 (59.66%), Query Frame = 0
Query:   65 ALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGG 302
            AL D++S VS  +  + T +N      +  P   + RFI    GD  +   R+  TL+WR+    D IL  PH  FD IK  YP ++  + R G PVYYER G++D   ++  G  +++L+ HY+++TE+ +  + P+++ ++IT+LDV G+G+ DL GE  DF++R+    G HYPERS  I I+  P WF+++W++++P+I+  T+ K  +       + ++  +DPE IP ++GG
Sbjct:  441 ALSDTASPVSDVDGVIETETNAI----SGGPIAFSPRFIAAEKGDERKGHARYLATLEWREVNNIDNILVTPHTTFDTIKKYYPQYFHGKTRDGLPVYYERPGKIDLTALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDPENIPSDFGG 674          
BLAST of EWM26753.1 vs. NCBI_GenBank
Match: gi|567950526|gb|ETK76237.1| (hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567979196|gb|ETL29678.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|570316796|gb|ETO64744.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976])

HSP 1 Score: 187.963 bits (476), Expect = 4.812e-51
Identity = 85/238 (35.71%), Postives = 144/238 (60.50%), Query Frame = 0
Query:   65 ALDDSSSKVSGTNDHLATSSNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGG 302
            AL +++S VS  +    + +N      +  P   + RFI G  GD E+ + R+  TL+WRKE   D IL  PH  F+ IK  YP ++  + R G PVYYER G++D   ++  G  +++L+ HY+++TE+ +  + P+++ ++IT+LDV G+G+ DL GE  DF++R+    G HYPERS  I I+  P WF+++W++++P+I+  T+ K  +       + ++  +D E IP ++GG
Sbjct:  337 ALSETASPVSDIDGITESETNAI----SGGPIAFSPRFIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGG 570          
The following BLAST results are available for this feature:
BLAST of EWM26753.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108841|gb|EWM26753.1|0.000e+0100.00phosphoinositol transporter [Nannochloropsis gadit... [more]
gi|585110946|gb|EWM28528.1|8.055e-11762.50phosphoinositol transporter [Nannochloropsis gadit... [more]
gi|585112878|gb|EWM30219.1|1.130e-6253.44phosphoinositol transporter [Nannochloropsis gadit... [more]
gi|298712383|emb|CBJ33167.1|2.014e-5637.28conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214702632|gb|OWZ14787.1|6.261e-5436.97SEC14 cytosolic factor [Phytophthora megakarya][more]
gi|695396344|ref|XP_009521431.1|5.245e-5336.55hypothetical protein PHYSODRAFT_479932 [Phytophtho... [more]
gi|953497210|emb|CEG41519.1|7.275e-5239.11sec14 cytosolic [Plasmopara halstedii][more]
gi|299469886|emb|CBN76740.1|9.342e-5240.77conserved unknown protein [Ectocarpus siliculosus][more]
gi|301112276|ref|XP_002905217.1|3.964e-5135.71SEC14 cytosolic factor, putative [Phytophthora inf... [more]
gi|567950526|gb|ETK76237.1|4.812e-5135.71hypothetical protein, variant 2 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3980rna3980Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications