EWM26704.1, cds3940 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|585108792|gb|EWM26704.1| (pseudouridine family [Nannochloropsis gaditana]) HSP 1 Score: 1173.69 bits (3035), Expect = 0.000e+0 Identity = 568/568 (100.00%), Postives = 568/568 (100.00%), Query Frame = 0
Query: 1 MAKCPPDGTTIAFFSSVHFLIFVMGIYLKTSDGFICPRGGMQRLSLSPCPQQRTVFAMMAGRKPPWQRRGPDKKQDSEDELWVLEQSLLNGSSPRTSAFVPSITPTSKTSSSTPEKTDNTLKDTDGNFGTLRDEANITAQFMFVANTSESLIRVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWDMVDRRPSAGDESMTDGKDLIESQQGWEEVVHDPKAGERVVDEFDWEID 568
MAKCPPDGTTIAFFSSVHFLIFVMGIYLKTSDGFICPRGGMQRLSLSPCPQQRTVFAMMAGRKPPWQRRGPDKKQDSEDELWVLEQSLLNGSSPRTSAFVPSITPTSKTSSSTPEKTDNTLKDTDGNFGTLRDEANITAQFMFVANTSESLIRVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWDMVDRRPSAGDESMTDGKDLIESQQGWEEVVHDPKAGERVVDEFDWEID
Sbjct: 1 MAKCPPDGTTIAFFSSVHFLIFVMGIYLKTSDGFICPRGGMQRLSLSPCPQQRTVFAMMAGRKPPWQRRGPDKKQDSEDELWVLEQSLLNGSSPRTSAFVPSITPTSKTSSSTPEKTDNTLKDTDGNFGTLRDEANITAQFMFVANTSESLIRVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWDMVDRRPSAGDESMTDGKDLIESQQGWEEVVHDPKAGERVVDEFDWEID 568
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|1210511732|dbj|GAX29216.1| (23S rRNA pseudouridine1911/1915/1917 synthase [Fistulifera solaris]) HSP 1 Score: 244.973 bits (624), Expect = 5.259e-71 Identity = 158/389 (40.62%), Postives = 207/389 (53.21%), Query Frame = 0
Query: 153 RVDRLLTQRLKGHSRSSVCDLLDRGFV---YVNGSPARKSLKIVEGDEIFVRQCATNERLAE--VEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVV--GSEG-------------RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGV-TRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEWWD 520
R+D L L SRS L+ G V + +KS K+ EG + + ++ + E+IPLD+LYEDEH+I +NKA GMVVHPA GN GT VNAL+ ++ E V GS RPG+VHRLDKGT+GVL+ AK + A +LS AFA R+V KTYLAI++GNP Q ID PI RHP RQRM V +S G + D+ + S+ +GR+A S V TLAFDG+LSVV+V I TGRTHQIRVHLQ R P+ GD++YG WN R + + RP+LHA +L ++HPVTG + AP+ DM VA I P+ E+ E ++
Sbjct: 124 RIDAALAACLANESRSVCGSLVTEGCVQDGVTHEVLNKKSYKVQEGQTLRIDLSQRENKVPTDILVPENIPLDILYEDEHMIVLNKAAGMVVHPAAGNWRGTVVNALVYYLPNSPYGSGEFVTNGSMAANSNNEDGEPVLFRPGIVHRLDKGTTGVLVVAKNSHALTSLSEAFANRQVQKTYLAITVGNPGKQ-VTIDKPIARHPIHRQRMRVVPDPHQRDSS----------------GMAPKDRLLQPQSS------------------SGRRALSFVDTLAFDGQLSVVQVQIATGRTHQIRVHLQDRHTPIYGDDVYGLKDWNDRLFKTQQIRDRPLLHAYKLQIEHPVTGQVMEFRAPLAEDMFRVAKTICPRGDEFEHSEIFE 477
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|299470964|emb|CBN79948.1| (Pseudouridine synthase, RluD [Ectocarpus siliculosus]) HSP 1 Score: 244.202 bits (622), Expect = 1.780e-70 Identity = 158/391 (40.41%), Postives = 207/391 (52.94%), Query Frame = 0
Query: 142 MFVANTSESLIRVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEG--------------RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEW 518
M E R+D L R+ SRS L G V V G A+KS+K+ EG E+ VR + E ++ EDIPLD+LYED+ +IAV+K GMVVHPAPG+ NGTFVNAL+ H+ + G + + +E RPG+VHRLDKGT+GVLLAAK NP+ Q + ++ Q R S SY V N + D IG + + + ++ + + R+A S V T+AFDG+LSV EV IETGRTHQIRVHLQHRR PVLGDE+YGN WN R R+ G+TRP+LHA L HP TG+ + L AP+P D+ +V I+PQV+ E+ EW
Sbjct: 105 MLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPE--LSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAK---------------------------NPTMQAKLAEL--------------FAQRRISK-------SYLAVCVGNPGKAATIDVPIGRHPRDRQRMV---AVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVED-EHPEW 441
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|1208942415|ref|WP_088205723.1| (RluA family pseudouridine synthase [Chlamydiales bacterium SCGC AG-110-P3]) HSP 1 Score: 237.654 bits (605), Expect = 3.119e-70 Identity = 147/358 (41.06%), Postives = 196/358 (54.75%), Query Frame = 0
Query: 143 FVANTSESLIRVDRLLTQRLKGH-SRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDM 499
FV + SE+ R+D+LL+QR +G SRS L+ V +NG P +K ++ GDE+ V T E + E++PL+VLYED+H+I +NK+ GMVVHPAPGN GTFVNALL H G+ + S RPG+VHRLDK TSG L+AAK L F+ R++ K Y+A+ +GNP +DVPIGRHP R++MAV S + AV +Y TLA RLSVV++ +ETGRTHQIRVHL+HR P+LGD +YG N R++ +R MLHA RL HP+TG+ L ++AP+P DM
Sbjct: 9 FVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPE--VNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC----GDSFQAEASL-RPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPGD--GTVDVPIGRHPVHRKQMAVI-------------ESGGRHAVTHYS------------------------------------------TLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMN----RQYSASRQMLHAYRLRFMHPITGEKLDVMAPIPVDM 298
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|1206879396|emb|SCA62605.1| (Uncharacterized RNA pseudouridine synthase Cpar_0723 [Chlamydiales bacterium SCGC AG-110-P3]) HSP 1 Score: 237.654 bits (605), Expect = 5.590e-70 Identity = 147/358 (41.06%), Postives = 196/358 (54.75%), Query Frame = 0
Query: 143 FVANTSESLIRVDRLLTQRLKGH-SRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDM 499
FV + SE+ R+D+LL+QR +G SRS L+ V +NG P +K ++ GDE+ V T E + E++PL+VLYED+H+I +NK+ GMVVHPAPGN GTFVNALL H G+ + S RPG+VHRLDK TSG L+AAK L F+ R++ K Y+A+ +GNP +DVPIGRHP R++MAV S + AV +Y TLA RLSVV++ +ETGRTHQIRVHL+HR P+LGD +YG N R++ +R MLHA RL HP+TG+ L ++AP+P DM
Sbjct: 24 FVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPE--VNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHC----GDSFQAEASL-RPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPGD--GTVDVPIGRHPVHRKQMAVI-------------ESGGRHAVTHYS------------------------------------------TLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMN----RQYSASRQMLHAYRLRFMHPITGEKLDVMAPIPVDM 313
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|1084501684|gb|OGN64337.1| (23S rRNA pseudouridylate synthase [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9]) HSP 1 Score: 232.261 bits (591), Expect = 4.284e-68 Identity = 147/361 (40.72%), Postives = 188/361 (52.08%), Query Frame = 0
Query: 141 FMFVANTSESLIRVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEG--RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDM 499
F+FV E + R+D LL R HSR+ L++ GFV +NG P +K + EGDEI V AT E A +E E IPLD+LYEDEH++AVNK GMVVHPAPG+ +GTFVNALL H E+ S RPG+VHRLDK TSGVL+AAKT AH L F+ RR+ K YLAI G P Q I++PIGRHP R+ MA R + T Q A N + S+V + +TGRTHQ+RVHL+H P++GD +YG + + R +LHA RL +HP+T P++L AP+P DM
Sbjct: 13 FLFVTAEEEGM-RIDTLLGCRFPDHSRTYFQYLIESGFVLLNGEPVKKRILPEEGDEIEVCFQATAE--ASLEPESIPLDILYEDEHILAVNKPAGMVVHPAPGHWSGTFVNALLGHC-------REIAPSSDPLRPGIVHRLDKDTSGVLIAAKTLIAHQKLIEMFSSRRIEKLYLAICYGRP--QNGTINIPIGRHPVHRKEMAALPDGREAITE-------VQTAAFN-------------------------------------------------EKTSLVLLRPKTGRTHQLRVHLKHIGCPIVGDPVYGKKTDSPK--------RQLLHAYRLAFEHPITRAPIKLTAPLPQDM 297
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|692304075|ref|WP_032125019.1| (MULTISPECIES: pseudouridine synthase [Chlamydiia]) HSP 1 Score: 231.876 bits (590), Expect = 6.611e-68 Identity = 143/366 (39.07%), Postives = 191/366 (52.19%), Query Frame = 0
Query: 153 RVDRLLTQRL-KGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEE 517
R+D++L +R + HSR+ L+D + VNGSP +K K+ GDE+ V+ AT E A++ E IPL ++YED+H++ VNK GMVVHPAPGN +GTFVNALL H + V + RPG+VHRLDK TSG+L+AAKT L FA R+V K YLA+ IG P I PIGRHP R++MA+ R P S+ KTL ++G+LS+V+V I TGRTHQIRVHL+++ PVLGD LYG N + +LHA +L HPVT + L AP PP+M+ I P ++E+
Sbjct: 22 RLDKVLARRFSEKHSRTYFQYLIDEHLILVNGSPVKKRTKLQAGDEVEVQFAATPE--ADLSPEAIPLTIVYEDDHLLVVNKPAGMVVHPAPGNWSGTFVNALLYHCQQL-----PVPPNTNRPGIVHRLDKDTSGLLIAAKTLEMQQKLIELFASRQVYKEYLAVCIGRPPD--GEIQAPIGRHPILRKQMAIVPSGR-------PAISFC-------------------------------------------------KTLGWNGKLSLVQVVIATGRTHQIRVHLKYKGTPVLGDALYGQNPLNL----YYSAPHQLLHAAKLRFQHPVTKEQLEFFAPPPPEMMRFIRRIIPDSSYLQDEK 318
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|971147030|emb|CUI16035.1| (Ribosomal large subunit pseudouridine synthase D [Protochlamydia naegleriophila]) HSP 1 Score: 231.876 bits (590), Expect = 7.931e-68 Identity = 143/366 (39.07%), Postives = 191/366 (52.19%), Query Frame = 0
Query: 153 RVDRLLTQRL-KGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEE 517
R+D++L +R + HSR+ L+D + VNGSP +K K+ GDE+ V+ AT E A++ E IPL ++YED+H++ VNK GMVVHPAPGN +GTFVNALL H + V + RPG+VHRLDK TSG+L+AAKT L FA R+V K YLA+ IG P I PIGRHP R++MA+ R P S+ KTL ++G+LS+V+V I TGRTHQIRVHL+++ PVLGD LYG N + +LHA +L HPVT + L AP PP+M+ I P ++E+
Sbjct: 21 RLDKVLARRFSEKHSRTYFQYLIDEHLILVNGSPVKKRTKLQAGDEVEVQFAATPE--ADLSPEAIPLTIVYEDDHLLVVNKPAGMVVHPAPGNWSGTFVNALLYHCQQL-----PVPPNTNRPGIVHRLDKDTSGLLIAAKTLEMQQKLIELFASRQVYKEYLAVCIGRPPD--GEIQAPIGRHPILRKQMAIVPSGR-------PAISFC-------------------------------------------------KTLGWNGKLSLVQVVIATGRTHQIRVHLKYKGTPVLGDALYGQNPLNL----YYSAPHQLLHAAKLRFQHPVTKEQLEFFAPPPPEMMRFIRRIIPDSSYLQDEK 317
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|1084492106|gb|OGN55551.1| (23S rRNA pseudouridylate synthase [Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39] >gi|1084493689|gb|OGN57052.1| 23S rRNA pseudouridylate synthase [Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_45_9] >gi|1084497018|gb|OGN60065.1| 23S rRNA pseudouridylate synthase [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_44_59] >gi|1084503821|gb|OGN66238.1| 23S rRNA pseudouridylate synthase [Chlamydiae bacterium RIFCSPLOWO2_01_FULL_44_52] >gi|1084506198|gb|OGN68510.1| 23S rRNA pseudouridylate synthase [Chlamydiae bacterium RIFCSPLOWO2_02_FULL_45_22] >gi|1084507874|gb|OGN70137.1| 23S rRNA pseudouridylate synthase [Chlamydiae bacterium RIFCSPLOWO2_12_FULL_45_20]) HSP 1 Score: 225.713 bits (574), Expect = 1.347e-65 Identity = 144/360 (40.00%), Postives = 192/360 (53.33%), Query Frame = 0
Query: 140 QFMFVANTSESLIRVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEGRPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDM 499
+F+ +++ E L R+D+LL R GHSR+ LL+ G V +NG +K EGDEI V AT E A +E E IPLD+LYEDEH++A+NK GMVVHPAPG+ + TFVNALLAH ++ + RPG+VHRLDK T+GVLLAAKT AH L F+ R++ K YLA+ G P + A+I+VPIGRHP R+ MAV R + T Q A N + L++ + P TGR THQ+RVHL+H +P++GD LY + + R +LHA RL HPVT P+RL+AP+P D+
Sbjct: 8 EFLLISSREEGL-RIDKLLANRFPGHSRTYFQHLLELGCVLINGERVKKKTIPEEGDEIEVCFQATPE--ASLEPEHIPLDILYEDEHILAINKPAGMVVHPAPGHWSKTFVNALLAHCQHLAPGVDPL-----RPGIVHRLDKDTTGVLLAAKTTIAHQRLIELFSTRQMKKLYLAVCHGKPCN--ALINVPIGRHPVHRKEMAVLSDGREAITE-------VQVAAWN----------------DKFSLVLAK-------PQTGR--------------------------THQVRVHLKHAGSPIVGDPLYSTGELHDRQ---------LLHAYRLEFQHPVTKAPMRLIAPIPTDL 292
BLAST of EWM26704.1 vs. NCBI_GenBank
Match: gi|736384064|ref|WP_034408404.1| (pseudouridine synthase [Deinococcus murrayi]) HSP 1 Score: 208.379 bits (529), Expect = 7.219e-59 Identity = 145/355 (40.85%), Postives = 181/355 (50.99%), Query Frame = 0
Query: 153 RVDRLLTQRLKGHSRSSVCDLLDRGFVYVNGSPARK-SLKIVEGDEIFVRQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEG----RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAV-IDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASYAQDAVLNYDGCSEDDQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLS 501
R+D +L L G SRS V + G V V G PA K SLK+ G+ + VR + A + E +PLDVLYEDEH+IAVNK PGMV HPAPG +GT VNALL + + E G+EG RPG+VHRLDK TSGV++ AKT AHA L++AF +R KTYLAI+ G ++G V ++ PIGRHP RQRM V G S + + + GR L +V TGRTHQIRVHL H +P+LGD +YG A + R LHA L + HP TG PL L APVP D+L+
Sbjct: 16 RLDAVLAD-LTGVSRSQVAGWIAGGHVEVGGQPATKASLKLRGGEALSVRPPPPPD--ATIAPEQVPLDVLYEDEHLIAVNKPPGMVTHPAPGVTSGTLVNALLGRL-----TLPEQPGAEGPDGYRPGIVHRLDKDTSGVIVVAKTVGAHARLAAAFKDRDTRKTYLAIAAGTWRAEGPVTVNAPIGRHPTARQRMTVG-------------------------GASPREAQTRFTPLAAHPDGHGR-------------------------TLVLVRAQPRTGRTHQIRVHLAHLGSPLLGDPVYGRASAV--------MPRHALHAHFLTLPHPATGKPLHLHAPVPDDLLT 304 The following BLAST results are available for this feature:
BLAST of EWM26704.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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