EWM30256.1, cds394 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|585112915|gb|EWM30256.1| (hypothetical protein Naga_100003g91 [Nannochloropsis gaditana]) HSP 1 Score: 832.402 bits (2149), Expect = 0.000e+0 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
Query: 1 MLKQQKRGHMSCCLPGCVSRRLICLLVSSTVLGAAGYFGTSASLRQRHAPDFAGFQGTKRLLSSPNHKIVTSIGAAITSIEKMAGNGEDGKKTGRASGDVRSGRILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGGSATGEGKGRRKRKATAEQVAEVMADIALAEAFMGRSKAGKEGRKQRRGEEALELVRELFRPPDTRLPARVSVRR 411
MLKQQKRGHMSCCLPGCVSRRLICLLVSSTVLGAAGYFGTSASLRQRHAPDFAGFQGTKRLLSSPNHKIVTSIGAAITSIEKMAGNGEDGKKTGRASGDVRSGRILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGGSATGEGKGRRKRKATAEQVAEVMADIALAEAFMGRSKAGKEGRKQRRGEEALELVRELFRPPDTRLPARVSVRR
Sbjct: 1 MLKQQKRGHMSCCLPGCVSRRLICLLVSSTVLGAAGYFGTSASLRQRHAPDFAGFQGTKRLLSSPNHKIVTSIGAAITSIEKMAGNGEDGKKTGRASGDVRSGRILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGGSATGEGKGRRKRKATAEQVAEVMADIALAEAFMGRSKAGKEGRKQRRGEEALELVRELFRPPDTRLPARVSVRR 411
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|298715146|emb|CBJ27834.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 250.751 bits (639), Expect = 5.496e-76 Identity = 129/238 (54.20%), Postives = 162/238 (68.07%), Query Frame = 0
Query: 106 LQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLD--------RTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSE--SRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEI 333
++V+TDIDDTVKSSG RL G+ LGGID QY+RG +YPG FQF+LELSR+ VP +EP VAVLTARAREF FALE+ +H++ R + G NG++ WG G VLYGSVKEWVC SRK RK RNF L D Y+F+GDTGE D +AGE M ++P R++A+F+H VS+ + P P DR + VPV+YFRTYVGAAVKA ELGL+ G+E V+ E +
Sbjct: 96 VRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYRVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVCPSRKSERKARNFGFLLEDDEKGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAEHPDRMRAVFLHVVSDGPQQGKVPVPMDRVVNAVPVVYFRTYVGAAVKAVELGLMDKKGLENVITAAKEAM 333
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|1072231955|gb|OEU16687.1| (hypothetical protein FRACYDRAFT_185881 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 247.669 bits (631), Expect = 6.975e-76 Identity = 125/262 (47.71%), Postives = 174/262 (66.41%), Query Frame = 0
Query: 101 RSGRILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGV--PEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRT-DYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPP-PPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGGSATGEGKGRRKRKATAEQVAE 358
R+ R QVI+D+DDT+KSSGG+ + G+ALGGID QY RG +YPG +F L+LS + + + PA +A+LTARA EFK ALE+K K+ +AG G+EGWGVG VLYGSV EW+ Q RKGLRKF NFE L QD Y++VGD GELD +AGE+M+R+YP +KA+F+H V++ PP P + + P+++FRTYVGAAV A +LGL+ G+++V+ +E++ + + K RK + AE + E
Sbjct: 57 RTHRFTQVISDVDDTLKSSGGVNVGGVALGGIDVQYGRGDFYPGVAEFMLQLSLYKLLQQDSNYPANIAILTARAEEFKAALEIKDGSKLSIALRSAGEKAGIEGWGVGPVLYGSVAEWIIQDRKGLRKFTNFERLMQQDPAGVIFQYIYVGDVGELDQEAGETMVREYPEVVKAVFLHVVTDQADVPPIIPAPKFINGRPIVFFRTYVGAAVDAVQLGLMNLDGLQSVINAAIEKLSDVPETSDKWKDIRKDLSRAEILFE 318
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|1210515511|dbj|GAX25590.1| (hypothetical protein FisN_28Hh061 [Fistulifera solaris]) HSP 1 Score: 234.572 bits (597), Expect = 2.716e-71 Identity = 122/221 (55.20%), Postives = 152/221 (68.78%), Query Frame = 0
Query: 107 QVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRL-DRTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVV 326
QVI+D+DDT+KSSGGL + G+ALGG+D QY+RG YPG +F +LS V PA+VA+LTARA EFK ALELK S + R +A AG GV GWG+G VLYGSV EWV Q RKGLRKF NFE L QD + YV+VGDTGELD QA E+M+R+YP ++A+F+H VS P + + PVI+FRTYVGAA+ A ELGL+ G+ V+
Sbjct: 28 QVISDVDDTLKSSGGLNVAGVALGGVDVQYERGVVYPGVAEFMFQLSSNNVAT---PAKVAILTARAEEFKAALELKASSSLARKFAQAGERAGVSGWGIGPVLYGSVAEWVIQDRKGLRKFTNFERLLQQDPTGEVLRYVYVGDTGELDQQAAETMLREYPEIVQAVFLHVVSGELGDVFIPPPKLINGRPVIFFRTYVGAALAAVELGLMPREGLVQVI 245
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|1210511753|dbj|GAX29237.1| (hypothetical protein FisN_28Lh061 [Fistulifera solaris]) HSP 1 Score: 236.498 bits (602), Expect = 4.052e-71 Identity = 125/236 (52.97%), Postives = 157/236 (66.53%), Query Frame = 0
Query: 99 DVRSGRILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRL-DRTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEI 333
D S QVI+D+DDT+KSSGGL + G+ALGGID QY+RG YPG +F +LS V PA+VA+LTARA EFK ALELK S + R +A AG GV GWG+G VLYGSV EWV Q RKGLRKF NFE L QD + YV+VGDTGELD QA E+M+R+YP ++A+F+H VS P + + PVI+FRTYVGAA+ A ELGL+ G+ V+ ++ +
Sbjct: 86 DAFSNFYTQVISDVDDTLKSSGGLNVAGVALGGIDVQYERGAVYPGVAEFMFQLSSNNVDT---PAKVAILTARAEEFKAALELKASSSLARKFAQAGERAGVSGWGIGPVLYGSVAEWVIQDRKGLRKFTNFERLLQQDPTGEVLRYVYVGDTGELDQQAAETMLREYPEIVQAVFLHVVSGELGDVFIPAPKFINGRPVIFFRTYVGAALAAVELGLMPREGLVQVIDAAMQSL 318
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|551612886|ref|XP_005787450.1| (hypothetical protein EMIHUDRAFT_252700 [Emiliania huxleyi CCMP1516] >gi|485640829|gb|EOD35021.1| hypothetical protein EMIHUDRAFT_252700 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 238.424 bits (607), Expect = 6.375e-71 Identity = 132/245 (53.88%), Postives = 157/245 (64.08%), Query Frame = 0
Query: 92 KTGRASGDVRSGRILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRTDYVFVGDTG--ELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIE 334
+ G A G + G QV+TDIDDTVKSSGGL L G+ LGG+DT Y RG +YPG FQF LELS +P GR PARVAVLTARA EFK LE+K S K+C Y A WGVG VLYGSV+EWVCQ RKG RK NFE LRA+ R ++FVGD G E DL A E + R++P ++A+FMH VS + P P D L VP+ YFRTY AA KA +LGL+G +AR L+ E
Sbjct: 25 RRGAARGGLFGGGDTQVVTDIDDTVKSSGGLSLAGIPLGGVDTSYARGSFYPGVFQFGLELSCARLPPGRPPARVAVLTARAVEFKALLEIKQSSKLCVRYRDAAQRRLRAPWGVGPVLYGSVQEWVCQERKGWRKAANFELLRAEAPAGRR-FIFVGDNGASEKDLDAAERITRRHPGLVRAVFMHAVSPGATAAPLPPDGELHGVPLRYFRTYASAAAKAHQLGLIG----RGALARVLDSCE 264
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|551666714|ref|XP_005836118.1| (hypothetical protein GUITHDRAFT_136302 [Guillardia theta CCMP2712] >gi|428180270|gb|EKX49138.1| hypothetical protein GUITHDRAFT_136302 [Guillardia theta CCMP2712]) HSP 1 Score: 233.417 bits (594), Expect = 1.788e-69 Identity = 129/232 (55.60%), Postives = 149/232 (64.22%), Query Frame = 0
Query: 106 LQVITDIDDTVKSSGGLRL---MGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVG----------TVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSES------RPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLG 318
+QVITDIDDTVKSSGG+RL +G ALGGIDTQYKRG +YPG FQF LEL+ FG+P +EPA +AVLTARARE K L LKP K+C Y A A E WG+G TVLYGSV EW+ Q RKG RKF NF+ L+ + +RT YV VGDTGE D + GE M P +K +F H VSE P P DR L VPV YFRTYVGAA KA + L+G
Sbjct: 58 VQVITDIDDTVKSSGGVRLFWRVGPALGGIDTQYKRGDFYPGVFQFGLELASFGLPPNKEPAPLAVLTARARELKLFLALKPKTKLCVQYVKA-ATETFESWGIGSPRWGVDCERTVLYGSVMEWILQFRKGWRKFDNFKKLKEMND-ERTRYVLVGDTGEYDFECGERMAEFCPELVKGMFFHVVSEHDWKEAGEDGIPMPIDRYLNGVPVCYFRTYVGAARKAFRIKLIG 287
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|223999625|ref|XP_002289485.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974693|gb|EED93022.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 230.72 bits (587), Expect = 6.975e-69 Identity = 121/262 (46.18%), Postives = 166/262 (63.36%), Query Frame = 0
Query: 105 ILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVP-------------------EGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGV---EGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRT-DYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSP------PPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGG 337
+ QV++DIDDT+KSSGG+ + G++LGGID QY RG++YPG FQF ELS + + +G P +VAVLTARA EFK ALE+K K+ + + G ++ V + WGVG VLYGSV EW+ Q +KGLRKF NFE L QD R Y++VGDTGELD +AGE+M+R+YP ++A+F+H VS PS P P + + P+++FRTYVGAA KA +LGL+ G+ V+ + +E+E G
Sbjct: 59 LTQVVSDIDDTLKSSGGVTIAGVSLGGIDVQYARGEFYPGVFQFMWELSLYSITLNQQYYDDFTSEEDDSSLLQGLTPPKVAVLTARAEEFKAALEIKDESKLAQAFLKTGESSEVCPTKNWGVGPVLYGSVNEWIVQYKKGLRKFNNFERLLEQDPTGRILQYIYVGDTGELDQEAGETMLREYPEVVQAVFLHVVSFDSPSAYPSSGLPIPPSKLINGRPLVFFRTYVGAAAKATQLGLMEGDGLMRVMEKAEKELEERG 320
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|219129750|ref|XP_002185044.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403539|gb|EEC43491.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 225.713 bits (574), Expect = 5.481e-67 Identity = 118/237 (49.79%), Postives = 156/237 (65.82%), Query Frame = 0
Query: 107 QVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGV---PEGREPA------RVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRT-DYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEI 333
QVI+D+DDT+KSSGG+ + G+ALGGID QY RG+ YPG +F L++S GV P PA ++A+LTARA EFK AL+LK + AG GV WGVG VLYGSV EW+ Q RKG RKF NFE L QD YV+VGDTGELD +AGE+M+R+YP +KA+F+H V++ S P + + PVI+FRTYVGAAV A +LG + G+++V+A + + +
Sbjct: 86 QVISDVDDTLKSSGGVNVAGVALGGIDVQYPRGEMYPGVAEFMLQMS-LGVASSPTVSNPALAVAPPKIAILTARAEEFKIALQLKDDSPLVMALRQAGETAGVSNWGVGPVLYGSVAEWIAQDRKGFRKFTNFERLLQQDPTGIIFQYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVADKIGSVTVPPPKIINGRPVIFFRTYVGAAVAAVQLGFMSMDGLDSVIAASCQRL 321
BLAST of EWM30256.1 vs. NCBI_GenBank
Match: gi|397613403|gb|EJK62196.1| (hypothetical protein THAOC_17201 [Thalassiosira oceanica]) HSP 1 Score: 206.453 bits (524), Expect = 4.573e-59 Identity = 123/288 (42.71%), Postives = 162/288 (56.25%), Query Frame = 0
Query: 105 ILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRG--QYYPGAFQFALELSRFGVP-------EGRE-------PARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLDRT-DYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSESRPSPPPPR------DRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGGSATGEGKGRRKRKATAEQVAEVMADIALAEAF 369
+ QV++DIDDT+KSSGG+ + G+ALGGID QY RG Q YPG QF ELS + V E R+ P ++AVLTARA EFK ALE+K + K+ + WG+G VLYGSV EWV Q +KGLRKF NFE L QD + YVF GD GELD +AGE+++R+YP + A+F+H VS PS PP R + P+++FRTYVGAA A + GLL P + R ++E E + E + K + + + IA F
Sbjct: 39 LTQVVSDIDDTLKSSGGIEVAGIALGGIDVQYSRGTEQLYPGVAQFFYELSCYPVTKNIRHHEEHRDSPSFFLSPPKIAVLTARAEEFKAALEIKDNSKLALKLTNV---DPTSNWGIGPVLYGSVSEWVIQEKKGLRKFNNFERLLRQDPTGKIMRYVFCGDVGELDEEAGETILREYPEVVLAVFLHVVSAEPPSNYPPDGLLIPPSRLINGRPLVHFRTYVGAANSALKFGLLEPDA----LIRIIKEAESDLKSLNESETSSKWVDLRRDINDALVTIATCIIF 319 The following BLAST results are available for this feature:
BLAST of EWM30256.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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