EWM30305.1, cds391 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|585112964|gb|EWM30305.1| (Protein of unknown function DUF1751, integral membrane, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0 Query: 1 MATKMSRSGLVFGTATALIIAYSAMAFSPGGVGMALPLVLGNTYMNNFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 367 MATKMSRSGLVFGTATALIIAYSAMAFSPGGVGMALPLVLGNTYMNNFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV Sbjct: 1 MATKMSRSGLVFGTATALIIAYSAMAFSPGGVGMALPLVLGNTYMNNFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 367
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|585112965|gb|EWM30306.1| (Protein of unknown function DUF1751, integral membrane, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0 Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0 Query: 47 NFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 367 +FFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV Sbjct: 7 DFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQTTADV 327
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|299471462|emb|CBN79413.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.775 bits (286), Expect = 6.442e-25 Identity = 98/335 (29.25%), Postives = 152/335 (45.37%), Query Frame = 0 Query: 14 TATALIIAYSAMAFSPG-GVGMALPLVLGNTYMNNFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPL-EDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYG-YGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRAL-LPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGS-VGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAK 343 T +AL+ ++ + G G +L L+ +T+M F+ W LT +F ETS K+ L+ V+ +GP ED L + L A + + S TS +FM Y+VTR E L ++G +G + Q + G P F + LP SA+ RAL +P+ + DFP + SW+YLRFF H G+ GD +EDFQLVN FP R ++P+ DF YGV L G K R + ++++ + + D TP ++ D + ERRR +A++ L+ + ++ AK Sbjct: 18 TTSALLCVILVLSAAAGLGWRHSLSLIWNHTFMTQFYFWNVLTGSFVETSVFKLVASLIG----VAGLGPAAEDSLGHLGLGAFVLCVGLVSGFVTSCGIFMGYIVTRQEYLLDLELHGSFGVLAALAVAAAQQDASATLLPA------GRAPWFPTRYLPLLLVTASAMCRALSVPV-------VAKDFPFVVVGAYASWVYLRFFAHLVLGAPSGDVTEDFQLVNFFPLPCRRVVKPMCDFTYGVFLLLGCFKGRAARLPVSVVDGQGGV---------------------DPLVVATLPTP---ARKDPIAERRRARAMKLLDEKFATLNAK 311
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|698776052|ref|XP_009821070.1| (hypothetical protein H257_00202 [Aphanomyces astaci] >gi|574123195|gb|ETV88670.1| hypothetical protein H257_00202 [Aphanomyces astaci]) HSP 1 Score: 92.0485 bits (227), Expect = 2.398e-17 Identity = 82/317 (25.87%), Postives = 131/317 (41.32%), Query Frame = 0 Query: 38 LVLGNTYMNNFFIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLL--ACSFAVS-----WLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEV 347 L + + + + W +T+ F +V L + V ++L R+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P + P +LP ++ LL +L + +V +T + L+ A +AVS W+YLRF N DGSVGD S+ F L LFP+F +P L P+FDFC+ V LCG + R+ N SL +D VTERR+ +A++AL+ +L +A V Sbjct: 39 LSIASVILEHIRPWAYITAPFYHQHLWEVVLIVPVTLYLGRRVEIALGTMSFVRLICFVSVVSTGLLFCD---MFALYIVFRSPFFLRTGVSGFTGGLVAMLVALVKENPVQPLGIP--------------KLPCRYY---PLLLTVLCVAMSVGAVLTKNEILIVGAGPYAVSGLYFGWVYLRFVAKNPDGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQ------------------------GHNATSGSSLAKAAL-----------ASDPVTERRKARAMKALDEKLAKLAVMPSSV 300
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|673017886|ref|XP_008862904.1| (hypothetical protein H310_01556 [Aphanomyces invadans] >gi|574482107|gb|ETW09099.1| hypothetical protein H310_01556 [Aphanomyces invadans]) HSP 1 Score: 88.9669 bits (219), Expect = 2.483e-16 Identity = 85/316 (26.90%), Postives = 126/316 (39.87%), Query Frame = 0 Query: 51 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALL---PIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQT 363 W +T+ F +V L + ++L SR+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P +A P R L T C++ + A+L I AG P W YLRF N+DGS GDTSE F L LFPSF +P L P+FDF + V LCG K R+ A+ P+ +D VTERR+ +A++AL+ +L +A V+ AS V + +T Sbjct: 52 WAYITAPFYHQHLWEVVLIVPATLYLGSRVEIALGTMSFVRLVCFVGVVSTGLLFCD---MFALYIVFRNAFFLRTGVSGFTGGLVAMLVALVKENPVQALVIPKVPCR-------YYPLMLTVLCLAMSIGAVLTKAEILIVGAG------PYAVSGLYFGWFYLRFIAKNADGSKGDTSEAFSLTVLFPSFLKPSLAPIFDFFFNVAKLCGLFKYRDAQAAA-------------------------------------ASLPKT-FPSDPVTERRKARAMKALDEKLAKLAVVPSGVAT---ASLLVHDDVET 310
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|673017890|ref|XP_008862906.1| (hypothetical protein, variant 6 [Aphanomyces invadans] >gi|574482113|gb|ETW09105.1| hypothetical protein, variant 6 [Aphanomyces invadans]) HSP 1 Score: 83.9593 bits (206), Expect = 3.630e-15 Identity = 77/277 (27.80%), Postives = 112/277 (40.43%), Query Frame = 0 Query: 90 VRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALL---PIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERELAMASNLIEEEENLLLGKDYFTSRASNDVQNHSLQDQRCNIHGETPENRSKTDSVTERRRIKALQALETRLHSIAAKEKEVSKLNVASRTVDEAAQT 363 VRL + + G C +F Y+V R T + G+ L+A + ++ P +A P R +P L T C++ + A+L I AG P W YLRF N+DGS GDTSE F L LFPSF +P L P+FDF + V LCG K R+ A+ + + +D VTERR+ +A++AL+ +L +A V+ AS V + +T Sbjct: 4 VRLVCFVGVVSTGLLFCD---MFALYIVFRNAFFLRTGVSGFTGGLVAMLVALVKENPVQALVIPKVPCR-YYP------LMLTVLCLAMSIGAVLTKAEILIVGAG------PYAVSGLYFGWFYLRFIAKNADGSKGDTSEAFSLTVLFPSFLKPSLAPIFDFFFNVAKLCGLFKYRDAQAAAASLPKT--------------------------------------FPSDPVTERRKARAMKALDEKLAKLAVVPSGVA---TASLLVHDDVET 223
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|673017894|ref|XP_008862908.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|673017896|ref|XP_008862909.1| hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574482108|gb|ETW09100.1| hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574482109|gb|ETW09101.1| hypothetical protein, variant 2 [Aphanomyces invadans]) HSP 1 Score: 83.9593 bits (206), Expect = 7.977e-15 Identity = 71/234 (30.34%), Postives = 102/234 (43.59%), Query Frame = 0 Query: 51 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALL---PIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKEREL-AMASNLIEEEENL 280 W +T+ F +V L + ++L SR+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P +A P R L T C++ + A+L I AG P W YLRF N+DGS GDTSE F L LFPSF +P L P+FDF + V LCG K R+ A A++L+ L Sbjct: 52 WAYITAPFYHQHLWEVVLIVPATLYLGSRVEIALGTMSFVRLVCFVGVVSTGLLFCD---MFALYIVFRNAFFLRTGVSGFTGGLVAMLVALVKENPVQALVIPKVPCR-------YYPLMLTVLCLAMSIGAVLTKAEILIVGAG------PYAVSGLYFGWFYLRFIAKNADGSKGDTSEAFSLTVLFPSFLKPSLAPIFDFFFNVAKLCGLFKYRDAQAAAASLVCYSSTL 269
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|698776056|ref|XP_009821072.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574123197|gb|ETV88672.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 83.5741 bits (205), Expect = 1.199e-14 Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 51 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLL--ACSFAVS-----WLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERE 266 W +T+ F +V L + V ++L R+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P + P +LP ++ LL +L + +V +T + L+ A +AVS W+YLRF N DGSVGD S+ F L LFP+F +P L P+FDFC+ V LCG + R+ Sbjct: 52 WAYITAPFYHQHLWEVVLIVPVTLYLGRRVEIALGTMSFVRLICFVSVVSTGLLFCD---MFALYIVFRSPFFLRTGVSGFTGGLVAMLVALVKENPVQPLGIP--------------KLPCRYY---PLLLTVLCVAMSVGAVLTKNEILIVGAGPYAVSGLYFGWVYLRFVAKNPDGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQ 254
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|698776058|ref|XP_009821073.1| (hypothetical protein, variant 3 [Aphanomyces astaci] >gi|698776060|ref|XP_009821074.1| hypothetical protein, variant 4 [Aphanomyces astaci] >gi|574123198|gb|ETV88673.1| hypothetical protein, variant 3 [Aphanomyces astaci] >gi|574123199|gb|ETV88674.1| hypothetical protein, variant 4 [Aphanomyces astaci]) HSP 1 Score: 82.4185 bits (202), Expect = 2.969e-14 Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 51 WTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFFTPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFTFFCVSALLRALLPIRFAVAGSMTMDFPLL--ACSFAVS-----WLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKERE 266 W +T+ F +V L + V ++L R+ + VRL + + G C +F Y+V R T + G+ L+A + ++ P + P +LP ++ LL +L + +V +T + L+ A +AVS W+YLRF N DGSVGD S+ F L LFP+F +P L P+FDFC+ V LCG + R+ Sbjct: 52 WAYITAPFYHQHLWEVVLIVPVTLYLGRRVEIALGTMSFVRLICFVSVVSTGLLFCD---MFALYIVFRSPFFLRTGVSGFTGGLVAMLVALVKENPVQPLGIP--------------KLPCRYY---PLLLTVLCVAMSVGAVLTKNEILIVGAGPYAVSGLYFGWVYLRFVAKNPDGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQ 254
BLAST of EWM30305.1 vs. NCBI_GenBank
Match: gi|674574772|emb|CDS39656.1| (transmembrane protein 115 [Echinococcus multilocularis]) HSP 1 Score: 81.6481 bits (200), Expect = 7.915e-14 Identity = 67/221 (30.32%), Postives = 106/221 (47.96%), Query Frame = 0 Query: 49 FIWTTLTSAFTETSGLKVSLDLLVLIWLVSRIGPLEDLLEPVRLAALTIIAAVGSALCTSVLVFMFYVVTRWETLFF-TPIYGYGPILMAYFILTAQKVPTEAFFSPPNIFRGVFPSFCMQQLPFT-FFC--VSALLRALLPIRFAVAGSMTMDFPLLACSFAVSWLYLRFFQHNSDGSVGDTSEDFQLVNLFPSFSRPYLRPVFDFCYGVLALCGQCKER 265 +IWT LT +F T L V LD+ + + + P + E VR A++ + + G A+CT +F+ Y T L + TPI G P+L A ++ Q P + P F + + FT FFC + A+LR + I F LL+ V+W+YLRFFQ +S+G +GDT++ F+ FP+ P + + Y +L C+ + Sbjct: 49 WIWTLLTFSFYNTRILHVFLDMTTVYLVDVVMFPSWKMTEVVRCCAISQLVSTGLAVCT---LFIGYACTFDTNLLWKTPICGLSPLLGAALVVARQLTPNNVLANLP------LGKFRTKHIAFTIFFCFLLFAILRIIDYIHFL----------LLSYGAFVTWVYLRFFQRHSNGDIGDTTDAFKFSGFFPNHLEPPVSIASNAIYNLLVKLHLCRSQ 250 The following BLAST results are available for this feature:
BLAST of EWM30305.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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