EWM26648.1, cds3901 (CDS) Nannochloropsis gaditana

Overview
NameEWM26648.1
Unique Namecds3901
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:391399..391461 +
Alignment locationCM002462.1:391690..394815 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26648.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g217.8159.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:391399..391461 +
CM002462.1supercontigCM002462.1:391690..394815 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
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BLAST of EWM26648.1 vs. NCBI_GenBank
Match: gi|585108736|gb|EWM26648.1| (hypothetical protein Naga_100001g217 [Nannochloropsis gaditana])

HSP 1 Score: 2109.72 bits (5465), Expect = 0.000e+0
Identity = 1062/1062 (100.00%), Postives = 1062/1062 (100.00%), Query Frame = 0 
Query:    1 MDTPATEEGEGRQPKPPATLTLQECGGGREGQVRTDAADGGCEGPVSPSPPLPLEGPAAELLDDLDPRNRGHENGEGGLHGPIGKSSGDGSQAGHAYAPQVAPPPTTSVPHPAPAFPTSSTDAAPALRSQPQPGASRQQQEESHEQSPSDEYLIAPFARSEPRQGQAPPFQDPRPPAPSAHHHEPFQTSALVYQQQSQHQSALQEPPTGRGGASTHNSHALLQLQQQLHARSAQAAAAAATQQQQQQERVAYLQQQQPLHRLSPFQQTPSQAEQDTLSRRQPRPPAPQHLPASTTAAPPKDPQAFQQYRAHSIPQHQPQPSSHHQPFHPSQHPQEQQRALQPEHDPLSLAPPADRYNASLPHGRFPPPSHVVAAARAHSSGVNGTYGGVNVDRRVASMDSSHGGSGSNIYISVPSRAMPSSVSGGVRDSRENWTYGVHQPYAQHSNLQPARSNGRGPSGYQDAESANPILEAQGGRDFGQRGGAGYQGGGAGGDRVLGMKRGLSSRYEDGGDSDREDDRKRRWMTKEQARACQQKFEEWNGSLRGKQEEVAQFAKGIGLSALQVEKRFHYIRKHYDKVTKRLTTEESSRGRGFELLNSGGGGIFGMCTGSTQIALISRVNEWAQHELDSDRMMKMLIHLASTVRHKETDEVLVRPSRHQITKLEGCKFFDGGVPPHLVVEPASTAAFVDVLQELDLVWLGRRTNPEPFALFMLDSGLANSVSSVTKWVDVRLRGHHLPCFTIVPKGRMKPVKTQIGVPWMQALMTSVPGMGTTRLISEENLEYVLSSDSQVLGNLMGLDALELLYTLSECLVLPQAPPGMLIADSAGGGGSGHQTVPLIAPLEHPRQAICPETQQSQQSHQQPQIQLQRGQLQQLSHQQQTQPYQQQQQPPQQAYLHQRQQPPPPQSQAPQPQPQPQQAHRHQQQEQQQQQQPQQQQREQQQQQQQQRQQQQQQQQQQQQPQQQPEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQQQQQHQHQPFKNSNDEQESTRVSAGTEKAASQLRKAEQDGARGGGGTKVHTAL 1062
            MDTPATEEGEGRQPKPPATLTLQECGGGREGQVRTDAADGGCEGPVSPSPPLPLEGPAAELLDDLDPRNRGHENGEGGLHGPIGKSSGDGSQAGHAYAPQVAPPPTTSVPHPAPAFPTSSTDAAPALRSQPQPGASRQQQEESHEQSPSDEYLIAPFARSEPRQGQAPPFQDPRPPAPSAHHHEPFQTSALVYQQQSQHQSALQEPPTGRGGASTHNSHALLQLQQQLHARSAQAAAAAATQQQQQQERVAYLQQQQPLHRLSPFQQTPSQAEQDTLSRRQPRPPAPQHLPASTTAAPPKDPQAFQQYRAHSIPQHQPQPSSHHQPFHPSQHPQEQQRALQPEHDPLSLAPPADRYNASLPHGRFPPPSHVVAAARAHSSGVNGTYGGVNVDRRVASMDSSHGGSGSNIYISVPSRAMPSSVSGGVRDSRENWTYGVHQPYAQHSNLQPARSNGRGPSGYQDAESANPILEAQGGRDFGQRGGAGYQGGGAGGDRVLGMKRGLSSRYEDGGDSDREDDRKRRWMTKEQARACQQKFEEWNGSLRGKQEEVAQFAKGIGLSALQVEKRFHYIRKHYDKVTKRLTTEESSRGRGFELLNSGGGGIFGMCTGSTQIALISRVNEWAQHELDSDRMMKMLIHLASTVRHKETDEVLVRPSRHQITKLEGCKFFDGGVPPHLVVEPASTAAFVDVLQELDLVWLGRRTNPEPFALFMLDSGLANSVSSVTKWVDVRLRGHHLPCFTIVPKGRMKPVKTQIGVPWMQALMTSVPGMGTTRLISEENLEYVLSSDSQVLGNLMGLDALELLYTLSECLVLPQAPPGMLIADSAGGGGSGHQTVPLIAPLEHPRQAICPETQQSQQSHQQPQIQLQRGQLQQLSHQQQTQPYQQQQQPPQQAYLHQRQQPPPPQSQAPQPQPQPQQAHRHQQQEQQQQQQPQQQQREQQQQQQQQRQQQQQQQQQQQQPQQQPEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQQQQQHQHQPFKNSNDEQESTRVSAGTEKAASQLRKAEQDGARGGGGTKVHTAL
Sbjct:    1 MDTPATEEGEGRQPKPPATLTLQECGGGREGQVRTDAADGGCEGPVSPSPPLPLEGPAAELLDDLDPRNRGHENGEGGLHGPIGKSSGDGSQAGHAYAPQVAPPPTTSVPHPAPAFPTSSTDAAPALRSQPQPGASRQQQEESHEQSPSDEYLIAPFARSEPRQGQAPPFQDPRPPAPSAHHHEPFQTSALVYQQQSQHQSALQEPPTGRGGASTHNSHALLQLQQQLHARSAQAAAAAATQQQQQQERVAYLQQQQPLHRLSPFQQTPSQAEQDTLSRRQPRPPAPQHLPASTTAAPPKDPQAFQQYRAHSIPQHQPQPSSHHQPFHPSQHPQEQQRALQPEHDPLSLAPPADRYNASLPHGRFPPPSHVVAAARAHSSGVNGTYGGVNVDRRVASMDSSHGGSGSNIYISVPSRAMPSSVSGGVRDSRENWTYGVHQPYAQHSNLQPARSNGRGPSGYQDAESANPILEAQGGRDFGQRGGAGYQGGGAGGDRVLGMKRGLSSRYEDGGDSDREDDRKRRWMTKEQARACQQKFEEWNGSLRGKQEEVAQFAKGIGLSALQVEKRFHYIRKHYDKVTKRLTTEESSRGRGFELLNSGGGGIFGMCTGSTQIALISRVNEWAQHELDSDRMMKMLIHLASTVRHKETDEVLVRPSRHQITKLEGCKFFDGGVPPHLVVEPASTAAFVDVLQELDLVWLGRRTNPEPFALFMLDSGLANSVSSVTKWVDVRLRGHHLPCFTIVPKGRMKPVKTQIGVPWMQALMTSVPGMGTTRLISEENLEYVLSSDSQVLGNLMGLDALELLYTLSECLVLPQAPPGMLIADSAGGGGSGHQTVPLIAPLEHPRQAICPETQQSQQSHQQPQIQLQRGQLQQLSHQQQTQPYQQQQQPPQQAYLHQRQQPPPPQSQAPQPQPQPQQAHRHQQQEQQQQQQPQQQQREQQQQQQQQRQQQQQQQQQQQQPQQQPEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQQQQQHQHQPFKNSNDEQESTRVSAGTEKAASQLRKAEQDGARGGGGTKVHTAL 1062
The following BLAST results are available for this feature:
BLAST of EWM26648.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108736|gb|EWM26648.1|0.000e+0100.00hypothetical protein Naga_100001g217 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3910rna3910Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications