EWM26794.1, cds3886 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|585108885|gb|EWM26794.1| (low affinity immunoglobulin epsilon fc receptor [Nannochloropsis gaditana]) HSP 1 Score: 2092 bits (5419), Expect = 0.000e+0 Identity = 1005/1005 (100.00%), Postives = 1005/1005 (100.00%), Query Frame = 0
Query: 1 MGYKRRREKGSLPCSASLNAAHGRKGALWPIPVDVSSYQWLQQSPHGTLVTHGCMTGSIRLPSRRLMTYTTIFEPFARIYFFLPSPRIRRRVSSLLSPPKSWSSCLQIFLLGILYLSMPTNAGGLYSIGTDSMTGSTSAPSNLGKTEGCFSKFDFLLSQTYPAVEIDNRVCQAFCASQRFSVSATSLNTCYCGNNYPSAFFKVKDDICDNPCSPDKTYCFVYACCGSRDGTYFTVAFAGQLLRQLTYDYRMSNPRLRDHIKTLMGASAPLQVMSSNGLSTGVVMSGGAGIGLQGSCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRDVGGFQWDDYTNWGPGEPNSLNGFVTKLPVSGAATGDAFDDLQAGVRNIRQLAVYSSSRLLGVQGRYLYTNGSEIIGNVMGTNKGGDTAVISLSYGQYFASAFGDVVNDKLQSLNLVVKDVKGNSITYGPYGTPGGSGAKSWIVNATGLLVGFFGFNSPQGINQLGFYDLQSPRCEEFTMLAVDQDVEPRWGTPLDVYLQHSATGAYLGIDGAGNVFTSTSRSNDAQLQVVGAVNTTGFTIKSKNYGFYLKLDPDEGHLKTLDSSVIDADDFSYYRREHQRRVPVAATENRRERNDAGAEDLRADESFMQSDSLSPKNSEDDSNEEGIFARKRRARNRRHQALDRSRREVLTFNAGTATPVPTPAGMKFDSNEANKPSVFSSTKSFGPVSVQNLQIGVTVQKSESMPNPRYCSLKIYDLTATSDSFSCYYIQGDTSNLPMVDLSVQAFTIQDKTTNMKPRTPLQNGRTKCENESPTDTLTCTFSYGEGLTFSTALSVTWGQNYANQFQMERRYGENTAIWYNYLYAYDNQYTSITTNTYVESRNWAVNVPVPPLTVCTIQYWLTSVDVNYVWLAILKATGSFELSANGVYFGTNHALSDVSDPWDLNVYQWGRYSAASQAEVIITTDEMQAAKYQLQVPPMNNIP 1005
MGYKRRREKGSLPCSASLNAAHGRKGALWPIPVDVSSYQWLQQSPHGTLVTHGCMTGSIRLPSRRLMTYTTIFEPFARIYFFLPSPRIRRRVSSLLSPPKSWSSCLQIFLLGILYLSMPTNAGGLYSIGTDSMTGSTSAPSNLGKTEGCFSKFDFLLSQTYPAVEIDNRVCQAFCASQRFSVSATSLNTCYCGNNYPSAFFKVKDDICDNPCSPDKTYCFVYACCGSRDGTYFTVAFAGQLLRQLTYDYRMSNPRLRDHIKTLMGASAPLQVMSSNGLSTGVVMSGGAGIGLQGSCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRDVGGFQWDDYTNWGPGEPNSLNGFVTKLPVSGAATGDAFDDLQAGVRNIRQLAVYSSSRLLGVQGRYLYTNGSEIIGNVMGTNKGGDTAVISLSYGQYFASAFGDVVNDKLQSLNLVVKDVKGNSITYGPYGTPGGSGAKSWIVNATGLLVGFFGFNSPQGINQLGFYDLQSPRCEEFTMLAVDQDVEPRWGTPLDVYLQHSATGAYLGIDGAGNVFTSTSRSNDAQLQVVGAVNTTGFTIKSKNYGFYLKLDPDEGHLKTLDSSVIDADDFSYYRREHQRRVPVAATENRRERNDAGAEDLRADESFMQSDSLSPKNSEDDSNEEGIFARKRRARNRRHQALDRSRREVLTFNAGTATPVPTPAGMKFDSNEANKPSVFSSTKSFGPVSVQNLQIGVTVQKSESMPNPRYCSLKIYDLTATSDSFSCYYIQGDTSNLPMVDLSVQAFTIQDKTTNMKPRTPLQNGRTKCENESPTDTLTCTFSYGEGLTFSTALSVTWGQNYANQFQMERRYGENTAIWYNYLYAYDNQYTSITTNTYVESRNWAVNVPVPPLTVCTIQYWLTSVDVNYVWLAILKATGSFELSANGVYFGTNHALSDVSDPWDLNVYQWGRYSAASQAEVIITTDEMQAAKYQLQVPPMNNIP
Sbjct: 1 MGYKRRREKGSLPCSASLNAAHGRKGALWPIPVDVSSYQWLQQSPHGTLVTHGCMTGSIRLPSRRLMTYTTIFEPFARIYFFLPSPRIRRRVSSLLSPPKSWSSCLQIFLLGILYLSMPTNAGGLYSIGTDSMTGSTSAPSNLGKTEGCFSKFDFLLSQTYPAVEIDNRVCQAFCASQRFSVSATSLNTCYCGNNYPSAFFKVKDDICDNPCSPDKTYCFVYACCGSRDGTYFTVAFAGQLLRQLTYDYRMSNPRLRDHIKTLMGASAPLQVMSSNGLSTGVVMSGGAGIGLQGSCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRDVGGFQWDDYTNWGPGEPNSLNGFVTKLPVSGAATGDAFDDLQAGVRNIRQLAVYSSSRLLGVQGRYLYTNGSEIIGNVMGTNKGGDTAVISLSYGQYFASAFGDVVNDKLQSLNLVVKDVKGNSITYGPYGTPGGSGAKSWIVNATGLLVGFFGFNSPQGINQLGFYDLQSPRCEEFTMLAVDQDVEPRWGTPLDVYLQHSATGAYLGIDGAGNVFTSTSRSNDAQLQVVGAVNTTGFTIKSKNYGFYLKLDPDEGHLKTLDSSVIDADDFSYYRREHQRRVPVAATENRRERNDAGAEDLRADESFMQSDSLSPKNSEDDSNEEGIFARKRRARNRRHQALDRSRREVLTFNAGTATPVPTPAGMKFDSNEANKPSVFSSTKSFGPVSVQNLQIGVTVQKSESMPNPRYCSLKIYDLTATSDSFSCYYIQGDTSNLPMVDLSVQAFTIQDKTTNMKPRTPLQNGRTKCENESPTDTLTCTFSYGEGLTFSTALSVTWGQNYANQFQMERRYGENTAIWYNYLYAYDNQYTSITTNTYVESRNWAVNVPVPPLTVCTIQYWLTSVDVNYVWLAILKATGSFELSANGVYFGTNHALSDVSDPWDLNVYQWGRYSAASQAEVIITTDEMQAAKYQLQVPPMNNIP 1005
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|585108919|gb|EWM26828.1| (macrophage mannose receptor 1 [Nannochloropsis gaditana]) HSP 1 Score: 310.457 bits (794), Expect = 3.293e-85 Identity = 177/477 (37.11%), Postives = 266/477 (55.77%), Query Frame = 0
Query: 536 EEFTMLAVDQDVEPRWGTPLDVYLQHSATGAYLGIDGAGNVF-TSTSRSNDAQLQVVGAVNTTGFTIKSKNY-GFYLKLDPDEGHLKTLDSSVIDADDFSYYRREHQRRVPVAATENRRERNDAGAEDLRADESFMQSDSLSPKNSEDDSNEEGIFARKRRARNRRHQALDRSRREVLTFNAGTATPVPTPAG-MKFDSNEANKPS-VFSSTKSFGPVSVQNLQIGVTVQKSESMPNPRYCSLKIYDLTATSDSFSCYYIQGDTSNLPMVDLSVQAFTIQDKTTNMKPRTPLQNGRTKCENESPTDTLTCTFSYGEGLTFSTALSVTWGQNYANQFQMER----RYGENTAIWYNYLYAYDNQYTSITTNTYVESRNWAVNVPVPPLTVCTIQYWLTSVDVNYVWLAILKATGSFELSANGVYFGTNHALSDVSDPWDLNVYQWGRYSAASQAEVIITTDEMQAAKYQLQVPPMNNI 1004
E F L VD WG P+ V +QH+ +GA++ +D G V+ T S D Q+ +T F I+S Y YL DP G L ++ ++ D++ A +++ E R ++ P + E +R+ NRR ++ T AG TPA M AN P+ VF ++ P+++QNLQI V V + ++M +PR C++ IYDLT SDS++CY +QGD + LP+V++ + A+ QDKT+ + PR+PL+NGRT+CEN +P +T+TC +YGEGLTF L +T+GQ YA FQ+ + G N +YN+ AY N YTS +Y+E+RNWAV VPV P ++ T+Q+W+++VD+NYVW AIL A GSF++S+ G+Y T +L+ +S DL Y +G ++ SQAE+IIT D+++ KY VP M N+
Sbjct: 796 ERFRFLQVDTQQPVLWGQPIPVRIQHADSGAFMAVDFTGRVYQTFVESSKDTLFQLETVPSTNAFLIQSLAYEAMYLNYDPSTGGLMG-GTAKLNVSDYAVETGIGGTNSVSIANAQAIKKDRLLTEKRRDGRGVKYTEKKKPDATPAPKRES-----RRKRTNRRDLQAGGTQGYEGTGGAGFTLAGNTPASTMAPFQKYANLPATVFMASTLIAPLALQNLQISVAVFREDTMESPRLCTMFIYDLTPNSDSYTCYQVQGDPTGLPLVEMEMAAWITQDKTSILSPRSPLENGRTRCENSAPAETVTCNVAYGEGLTFQRELDITFGQYYAFFFQINQGSAAGSGGNFGGYYNFQAAYTNVYTSQVIRSYIETRNWAVVVPVSPQSLATVQFWISTVDINYVWQAILNAQGSFDISSMGLYLSTGQSLTTLSYLEDLFFYTFGTFAYPSQAEIIITVDDVENQKYPFPVPSMTNV 1266 HSP 2 Score: 249.21 bits (635), Expect = 1.580e-64 Identity = 162/485 (33.40%), Postives = 249/485 (51.34%), Query Frame = 0
Query: 85 SPRIRRRVSSLLSPPKS-----------WSSCLQIFLLGILYLSMPTNAGGLYSIGTDSMTGSTSAPSNLGKTEGCFSKFDFLLSQTYPAV---EIDNRVCQAFCASQRFSVSATSLNTCYCGNNYPSAFFKVKDDICDNPCSPDKTYCFVYACCGSRDGTYFTVAFAG------QLLRQLTYDYRMSNPRLRDHIKTLMGASAPLQVMSSNGL-------STGVVMSGGAGIGLQGSCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRDVGGFQWDDYTNWGPGEPNSLNGFVTKL-PVSGAATGDAFDDLQAGVRNIRQLAV-YSSSRLLGVQGRYLYTNGSEIIGNVMGT-NKGGDTAVISLSYGQYFASAFGDVVNDKLQSLNLVVKDVK-GNSITYGPYGTP--GGSGAKSWIVNATG-LLVGFFGFNSPQGINQLGFYDLQSPRC 535
+ R+R+++S P S W++ L I+++ + P TGST P KTEGCF+ F LL +Y ++N C+A CA+ FS+SATS +C+CGNNYPS F +V+D C PCSPD+T C CCG G YFTV+FA QLLR LT+DYR+ N + H++ + ++A L V S +G+ ST + G G G CP ++ K ACY RV G++ + A+ CQ G +L ++ + +END++ +L + GW+G++ + G + WD +T WGPGEP S TKL + G G F+D + + L + Y + + +Q YL +G+ G G + +TA I+L+ + A G +L++L +V ++ GN+ TYGPYGT G SG S G +++ +G ++ + Q+GF + PRC
Sbjct: 29 TARLRKQLSKHFLPHHSRRYPIQLTVSFWAAFLVIYMVCPRISAQP------------QATGSTDYPPT-AKTEGCFNDFFTLLQISYGGAGQESLNNIRCRARCAASGFSMSATSAQSCHCGNNYPSVFHRVRDTQCSQPCSPDRTVCEESGCCGDAKGKYFTVSFAREIDVTLQLLRTLTFDYRVQNKLFQQHVEGRLASAASLMVASFDGVEAMSSTASTNAQVDGVIGFG--NGCPTGWAVHKRACYKRVSGRLTDFSTAQATCQNMGGNLPMLKTVDENDFVRSLLNGQAGWLGMTAKS-GRWDWDLFTGWGPGEPASAG--PTKLSSLFGPGGGTTFNDYSEDIVALDTLTIGYRVTGIDAIQVSYLRKDGTIYAGPSRGAFQRTSNTAAITLAQDERIAKVEGTSSGAQLRTLTFIVTNLNGGNAKTYGPYGTSLLGNSGGTSSFSYTPGDVIMAVYGSHTDMAVTQIGFVESNIPRC 495
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|585111607|gb|EWM29088.1| (wsc domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 107.071 bits (266), Expect = 5.757e-20 Identity = 64/226 (28.32%), Postives = 113/226 (50.00%), Query Frame = 0
Query: 145 KTEGCFSKFDFLLSQTYPAVEIDNRVCQAFCASQRFSVSAT---SLNTCYCGNNYPSAFFKVKDDICDNPCSPDKTYCFVYACCGSRDGTYFTVAFAGQ------LLRQLTYDYRMSNPRLRDHIK--TLMGASAPLQVMSSNGLSTGVVMSGGAGIGLQGSCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSN 359
+ EGCF+ F + + N CQA C + ++++AT S + C+CGN+YP +V CD PCS DK C ++ CCG R+G+ FT+++ G+ LL +L+ +YR S ++ I L + Q+ +S+ L + G G CP + + G CY + + +Y +A+++CQ +G L + S +N ++ + GW+ + +
Sbjct: 60 QVEGCFNNFIAKFAVSLAQNNFSNLRCQAICTERGYALAATGGGSQSICWCGNDYPGLPHEVDTFRCDRPCSLDKKTCHLFTCCGDRNGSLFTISWNGEVNPVKHLLGRLSEEYRSSTIFRQNIINDYLLSDNRSSFQLCASDKLPENPPLYLSVGNG----CPVGWCKRDGWCYKQHWADPSTYDEAQDKCQLEGGELVNVRSSVQNAFVLSLYAGCLGWLHIES 281
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|505842654|ref|XP_004614832.1| (PREDICTED: low affinity immunoglobulin epsilon Fc receptor [Sorex araneus]) HSP 1 Score: 72.0182 bits (175), Expect = 6.112e-10 Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 0
Query: 296 CPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRDV-GGFQWD-----DYTNWGPGEPNS 380
CP+H+ F+ CY G ++QA+ C+ L I S+EE D+LT + WIGL + D+ G F W DY+NWGPGEPN+
Sbjct: 161 CPEHWVNFRRKCYYFGQGSTKKWLQARNECRALQGQLVSIHSQEEQDFLTPHGSKFGTWIGLRDLDLEGQFVWMDENPLDYSNWGPGEPNN 251
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|562885653|ref|XP_006170280.1| (PREDICTED: low affinity immunoglobulin epsilon Fc receptor isoform X3 [Tupaia chinensis]) HSP 1 Score: 71.2478 bits (173), Expect = 1.226e-9 Identity = 53/142 (37.32%), Postives = 69/142 (48.59%), Query Frame = 0
Query: 255 RLRDHIKTLMGASAPLQVMSSNGLSTGVVMSGGAGIGLQGS-------CPDHYSEFKGACYSRVYGK-MMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRDV---GGFQWDD-----YTNWGPGEPNS 380
RLR+ + TL + M+S+ L I LQ S CP + FK CY +GK +IQA+ C++ G L I SREE D+LT ++ WIGL RDV G F W D Y+NW PGEPN+
Sbjct: 114 RLREDLNTLKSQGLNERRMASDELKRLQEEVAKLRIELQVSNGSMCNLCPKDWVNFKHKCY--YFGKGAKKWIQARYACEDLGGRLVSIHSREEQDFLTTRANKKGSWIGL--RDVFVEGEFLWMDGSPVGYSNWYPGEPNN 251
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|260832952|ref|XP_002611421.1| (hypothetical protein BRAFLDRAFT_63950 [Branchiostoma floridae] >gi|229296792|gb|EEN67431.1| hypothetical protein BRAFLDRAFT_63950 [Branchiostoma floridae]) HSP 1 Score: 66.6254 bits (161), Expect = 2.991e-9 Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 295 SCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRD-VGGFQWDD------YTNWGPGEPNSLNG 383
SCP+ Y + G CY +V+ ++ A C EDG LA+ + N +L + +R WIGL +RD G F+W D YT+W PG+P+SL G
Sbjct: 6 SCPEGYIMWIGVCY-KVFNTEKTFSDAAATCGEDGGLLAMPRDAKTNAFLVSLSGKRAFWIGLHDRDEEGSFEWVDGSALGAYTSWSPGQPDSLRG 100
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|260783524|ref|XP_002586824.1| (hypothetical protein BRAFLDRAFT_247763 [Branchiostoma floridae] >gi|229271951|gb|EEN42835.1| hypothetical protein BRAFLDRAFT_247763, partial [Branchiostoma floridae]) HSP 1 Score: 65.4698 bits (158), Expect = 4.701e-9 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0
Query: 295 SCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSN-RDVGGFQWDD------YTNWGPGEPNSLNG 383
SCP+ Y+EF+G CY +V+ ++ A C EDG +LA+ E + +L W GL + R+ G F+W D Y++W PGEPN+ G
Sbjct: 2 SCPEGYAEFRGICY-KVFNTRKTFSDAAAACGEDGGTLAMPRDAETDAFLILCTSPDLFWFGLHDRREEGSFEWVDGSALGTYSSWAPGEPNNFQG 96
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|850327780|ref|XP_012863950.1| (PREDICTED: low affinity immunoglobulin epsilon Fc receptor [Echinops telfairi]) HSP 1 Score: 68.5514 bits (166), Expect = 4.740e-9 Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 0
Query: 296 CPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRD-VGGFQWD-----DYTNWGPGEPN 379
CP+ + F+ CY K +IQAK C + L I S +E D+L+R ++ WIGL + D G F W DY+NW PGEPN
Sbjct: 117 CPEQWIHFQKKCYYFGRSKPRKWIQAKHACSDLQGRLVSIHSSQEQDFLSRHASKKGSWIGLQDLDREGEFVWPDGSPVDYSNWRPGEPN 206
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|830096277|ref|XP_012584906.1| (PREDICTED: low affinity immunoglobulin epsilon Fc receptor [Condylura cristata]) HSP 1 Score: 69.707 bits (169), Expect = 5.323e-9 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0
Query: 294 GSCPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDGASLAVITSREENDYLTRMLFQRPGWIGLSNRDV-GGFQWD-----DYTNWGPGEPNS 380
GSCP+ + F+ CY G ++QA+ C+ L I S++E D+LTR + + WIGL + D+ G F W DY+NWGPGEPN+
Sbjct: 178 GSCPEQWVNFRRKCYYFGQGSK-KWVQARNACRGLQGQLVSIHSQQEQDFLTRHVSRTGSWIGLRDLDIEGEFVWMDGNPLDYSNWGPGEPNN 269
BLAST of EWM26794.1 vs. NCBI_GenBank
Match: gi|443691740|gb|ELT93508.1| (hypothetical protein CAPTEDRAFT_76348, partial [Capitella teleta]) HSP 1 Score: 65.4698 bits (158), Expect = 5.636e-9 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 0
Query: 296 CPDHYSEFKGACYSRVYGKMMSYIQAKERCQEDG--ASLAVITSREENDYLTRM--LFQRPGWIGLSNRDVGG-FQWD-----DYTNWGPGEPNSLN 382
CPDH+ CY RV+ + S+ +A+ C + G A LA +TS E N+++ + ++Q+ WIGL+ R F+W YTNW PGEPNS N
Sbjct: 1 CPDHWIGAGDRCY-RVFTQETSWEKAEYNCMQHGYVAHLATVTSDEGNEHIVELSQIYQQDLWIGLNRRQEHSLFEWTSGKDVQYTNWAPGEPNSHN 96 The following BLAST results are available for this feature:
BLAST of EWM26794.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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