EWM26817.1, cds3869 (CDS) Nannochloropsis gaditana

Overview
NameEWM26817.1
Unique Namecds3869
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:303397..307275 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26817.1
ProductPectin lyase fold/virulence factor
Orig transcript idgnl|cribi|Naga_100018g27.2797.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:303397..307275 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
Homology
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585108908|gb|EWM26817.1| (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 2630.9 bits (6818), Expect = 0.000e+0
Identity = 1292/1292 (100.00%), Postives = 1292/1292 (100.00%), Query Frame = 0
Query:    1 MSPSRGNDEGPDKEDKCVMRTACAALPTLLSVDEAHFESPEGLSCSVPKKGGRPPPYTTSSPASQCQRRRRALAATLLFLCLVAGIAAVFRSRRQDGNSKTSGPVVAEDKIIAPAVVSKGGPSEAVEGIKIEKSGSHESASSTAKGSIPSEGLLPGGGGDARVQPAEEKGGGEEEDASWGDYIAVHGCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAGNFFSLNSSTDVVLATRNVFIIWDAPGVGKRGMSAAGGGRRRELDDQGAAEEQDRWREEGARVEPGGPSQEQYAVTALGRTSSVIMRHVSWQENGLEDFKAAFRKGILGSEPGGEGSVEAAGTRNGVLNVGSLLRWPHYLRQLQHHRRVQVEQAAGGPLSSVDPPRAPETLAPNTGSFPPVEQGDVGPSTLSAAMLFNASFYTPLAPGSPILVPRPDPATTTTNKVYLASTLGRCQACDVRGPRMRAGGQEGEVEGDLEAPALTSAHFNGAGAAGCEFRDVCGTVQEEVERDAQEMQEQMWMSDPERGIQPNTTLGIMDFVVSYAPSLPPHPHGPSRGGTAVTAEHVQTAVNQTMQSLGLSQRLLLRVVATGNAPPYSSSNHGVGESGEAGSRSLEQAETREGGIGGGEPECTATAPFRAYLVTDHWKVANQASKRFREASTVLLLTDTIQAQVPSVCGVTTSNTFSFYVPSVNASALLAKEKDKNNFIARITGSTENAVTQYIRDDDLQSSDGFLSTEPFDFGEEGPQQPTAALLAITSQNAKEEVEDNDVEQVRVFRVVMGKSYRLILRGFPPGRLLSLRLVPKEGRSTLLGMTMSSLPTASSLPFLSASTSSQEWTWSVSRTKHEAGDYFIEVTSQTQDAFAYTQAFALLEFSTRK 1292
            MSPSRGNDEGPDKEDKCVMRTACAALPTLLSVDEAHFESPEGLSCSVPKKGGRPPPYTTSSPASQCQRRRRALAATLLFLCLVAGIAAVFRSRRQDGNSKTSGPVVAEDKIIAPAVVSKGGPSEAVEGIKIEKSGSHESASSTAKGSIPSEGLLPGGGGDARVQPAEEKGGGEEEDASWGDYIAVHGCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAGNFFSLNSSTDVVLATRNVFIIWDAPGVGKRGMSAAGGGRRRELDDQGAAEEQDRWREEGARVEPGGPSQEQYAVTALGRTSSVIMRHVSWQENGLEDFKAAFRKGILGSEPGGEGSVEAAGTRNGVLNVGSLLRWPHYLRQLQHHRRVQVEQAAGGPLSSVDPPRAPETLAPNTGSFPPVEQGDVGPSTLSAAMLFNASFYTPLAPGSPILVPRPDPATTTTNKVYLASTLGRCQACDVRGPRMRAGGQEGEVEGDLEAPALTSAHFNGAGAAGCEFRDVCGTVQEEVERDAQEMQEQMWMSDPERGIQPNTTLGIMDFVVSYAPSLPPHPHGPSRGGTAVTAEHVQTAVNQTMQSLGLSQRLLLRVVATGNAPPYSSSNHGVGESGEAGSRSLEQAETREGGIGGGEPECTATAPFRAYLVTDHWKVANQASKRFREASTVLLLTDTIQAQVPSVCGVTTSNTFSFYVPSVNASALLAKEKDKNNFIARITGSTENAVTQYIRDDDLQSSDGFLSTEPFDFGEEGPQQPTAALLAITSQNAKEEVEDNDVEQVRVFRVVMGKSYRLILRGFPPGRLLSLRLVPKEGRSTLLGMTMSSLPTASSLPFLSASTSSQEWTWSVSRTKHEAGDYFIEVTSQTQDAFAYTQAFALLEFSTRK
Sbjct:    1 MSPSRGNDEGPDKEDKCVMRTACAALPTLLSVDEAHFESPEGLSCSVPKKGGRPPPYTTSSPASQCQRRRRALAATLLFLCLVAGIAAVFRSRRQDGNSKTSGPVVAEDKIIAPAVVSKGGPSEAVEGIKIEKSGSHESASSTAKGSIPSEGLLPGGGGDARVQPAEEKGGGEEEDASWGDYIAVHGCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAGNFFSLNSSTDVVLATRNVFIIWDAPGVGKRGMSAAGGGRRRELDDQGAAEEQDRWREEGARVEPGGPSQEQYAVTALGRTSSVIMRHVSWQENGLEDFKAAFRKGILGSEPGGEGSVEAAGTRNGVLNVGSLLRWPHYLRQLQHHRRVQVEQAAGGPLSSVDPPRAPETLAPNTGSFPPVEQGDVGPSTLSAAMLFNASFYTPLAPGSPILVPRPDPATTTTNKVYLASTLGRCQACDVRGPRMRAGGQEGEVEGDLEAPALTSAHFNGAGAAGCEFRDVCGTVQEEVERDAQEMQEQMWMSDPERGIQPNTTLGIMDFVVSYAPSLPPHPHGPSRGGTAVTAEHVQTAVNQTMQSLGLSQRLLLRVVATGNAPPYSSSNHGVGESGEAGSRSLEQAETREGGIGGGEPECTATAPFRAYLVTDHWKVANQASKRFREASTVLLLTDTIQAQVPSVCGVTTSNTFSFYVPSVNASALLAKEKDKNNFIARITGSTENAVTQYIRDDDLQSSDGFLSTEPFDFGEEGPQQPTAALLAITSQNAKEEVEDNDVEQVRVFRVVMGKSYRLILRGFPPGRLLSLRLVPKEGRSTLLGMTMSSLPTASSLPFLSASTSSQEWTWSVSRTKHEAGDYFIEVTSQTQDAFAYTQAFALLEFSTRK 1292          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585102763|gb|EWM22289.1| (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 371.703 bits (953), Expect = 7.752e-106
Identity = 350/1200 (29.17%), Postives = 539/1200 (44.92%), Query Frame = 0
Query:  182 YIAVHGCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPA--IVATNPNLFNFYVAGNFFSLNSSTDVVLATR--NVFIIWDAPGVGKRGMSAAGGGRRRELDDQGAAEEQDRWREE----------GARVEPGGPSQ---EQYAVTALGRTSSVIMRHVSWQENGLEDFKAAFRKGILGSEPGGEGSVEAAGTRNGVLNVGSLLRWPHYLRQLQHHRRVQVEQAAGGPLSSVDPPRA------PETLAPNTGSFPPVEQGDV----GPSTLSAA------MLFNASFYTPLAPGSPILVPRPDPATTTTNKVYLASTLGRCQACDVRGPRMRAGGQEGEVEGDLEAPALTSAHFNGAGA-AGCEFRDVCGTVQEEV-----------ERDAQEMQEQ----MWMSDPERGIQPNTTLGIMDFVVSYAP-SLPP-HPHGPSRGGTAVTAEHVQTAVNQTMQSLGLSQRLLLRV----VATGNAPPYSSSNHGVGESGEAGSR----SLEQAETREGGIGGGEPECTATAPFRAYLVTDHWKVANQASKRFREASTVLLLTDTIQAQV----------------------PSVCGVTTSNTFSFYVPSVN--ASALLAKEKDKNNFIARITGSTENAVTQYIRDDDLQSSDGFLSTEPFDFGEEG--PQQPTAALLAITSQNAKEEVEDNDVEQVRVFRVVMGKSYRLILRGFP---PGRLLSLRLVPKEGRSTLLGMTMSSLPTASSLPFLSASTSSQEWTWSVSRTKHEAG--------DYFIEVTSQTQDAFAYTQAFAL 1285
            Y+AV GCTP    +LR +++  +CP +TL P   Y + E++ +RR V ++GRPL LP+IDAH   RAF VEA G LD+RFV++ +G  + VV  V   LRG   +IR GG  +FTGC    +       L  +  +   +++GG ++ E+GTLRV DCH+   R G+  RE+  VGG  LV+ GN+++TG       +F + +G G +++ LGG  VITG  F     F  + G+G L F+GGG++ILTGC+    +GF ++FG G G++TG GV+V+TG ++ +N  M    G G   A+G GV ++TGV+Q        V   G+  ++GAG  V++D +  R + +  FFG G  LYLGAG AT+ N V    T I      GGD AV  G+++ +N  +     I+   GQG D  +  GGA LV   Y  TPA  +   +  L   YVAGN        +V L+T+  N  ++++   V K G +        +         +  WR            G R+E  G ++   +    + LG+ +++  R    +          F  G LGSE   +         N  L V  +          + H RV+      G  +  D P A      PET +PNT S   VE   V    GP T  +       +  NA +     PG  + V R     T T+K+Y+A+ +  C  CDV                    P  T  + +G GA + C  ++ C T                    Q   EQ    MW++  E     N+T+ +++   ++ P + PP    G S     V    V  A+ + + SLGLS+R  LRV     ++ N  PY     G  E  E+ +     S++ AE         +  C     F+AYLV+D   V ++ S++ + ++    LT  +Q +V                      PSVC +    T S YVPS     S   A  +  +  + R T ++ +A  + +  D L+        E  D   +    ++ +AAL  +   +        ++   RV  V + ++Y L+L  FP       L++R VP++G   LL    ++LP+   +      T  Q W+W   R +   G        +Y++EVTS    AF  T  F +
Sbjct:    3 YVAVEGCTPKNAEELRYMIDHTTCPRLTLVPATNYSITEQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVKGKFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRFSANWRNAALFLGITPPQTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVNMAIFASSLGAGGYVANLGGTVVITGCLFNYAGTFVCTMGLGYLFFLGGGATILTGCIVTTTIGFAAYFGGGIGIFTGSGVAVMTGFIYAANGIMGIGTGLGFQIAVGAGVSIRTGVIQTTMSALGYVTGCGITNYIGAGIAVFSDVILARSTALLTFFGTGSYLYLGAGSATIVNAVGFFNTGIGANGFVGGDMAVFGGYMSRINQVYISTSAISFAAGQGADLFIGLGGASLVLNLYI-TPATPVAFRSRGLVAIYVAGN--------NVFLSTQLGNATVLFNVLTVNKHGQT--------DWSRNIFVARKISWRFTDVGPNPDDFVGRRLEAPGENKAGLDPAKRSGLGKPATLAARGEDVEVRQTHPTVPRFLTGSLGSETSFDVKPTVTDILNKYLPVEDVESIAEDTTGEEGHDRVE------GHGNQNDGPEATLAKGGPET-SPNT-SQGRVEDNAVASVTGPKTNYSGDGDLGNITHNAFYAFAEIPG--LKVER-----TKTDKIYVAAPMDVCGVCDV-------------------TPGNTFDNVDGPGALSACGMQNTCATSDASTLALPPGGEGDGNGAGQAGGEQPGSGMWVTSREEK-SANSTVQLLEIRSTFTPFAAPPLSSSGASPAVAGVNKIEVAAALGEAIVSLGLSERWHLRVEPSWESSKNVDPYLRL-EGDAEMEESDATFDYGSIDPAEV------ANQEACGRKESFKAYLVSDWKNVTDEISRKLKTSTGTKALTLALQKEVEHTAAVAANATDGENDGGMPAPPSVCELVVYRTTSLYVPSTTFAGSGATAVTRLASAPVTRRTTASTSAFHRVLSADGLRFELEEAEVEEDDEQVKALLSREASAALTLLIPDSTDPYALLRELPP-RVDAVEIDENYSLVLSNFPGTFQMATLTVRAVPEKGEDVLL----ATLPSQPHM-----LTRQQVWSW---RPRDSLGAEQLVKGREYYLEVTSSDGMAFDSTNKFVI 1130          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585107242|gb|EWM25479.1| (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana])

HSP 1 Score: 197.593 bits (501), Expect = 7.056e-48
Identity = 190/607 (31.30%), Postives = 300/607 (49.42%), Query Frame = 0
Query:   67 QRRRRALAATLLFLCLVAGIAAVFRSRRQDGNSKTSGPV--VAEDKIIAPAVVSKGGPSE----AVEGIKIEKSGSHESASSTAKGSIPSEGLLPGGGGDARVQPAEEKGG--GEEEDASWGDY----------IAVHGCTPDTGVQLRSLVETGS-CPVITLTPGVRYVL-----DEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRG-------VPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVG--DVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATN-----PNLFNFYVAGN 635
            ++    L A L  + L+AGI   F+   +   S++  P   V E+      VV    P++      E ++ E+  S ES      GS+P   +L G       + ++  GG  GEE  A+  D+          I+   C P +G++LR + E  S C +I+L PG  Y +     D++I +    VIIG P++LP ID     R F + A G LDL+FV+ +RG       +P+         LRGG A +  GG     G ++  +   VG   +L+A D+    R++GG + +  G + +   H  + +PGVL RE+Y VG  +LVV+G   ++G T T + LF+   GVG  +++LGG  V +G +F +N     + G G+LVF+GGG  I +GC    N+   S FG G  L+ GGGV V++G  F+++L ++   G G+  +LGGG +  TGV Q  +   +  A  GV  +VGAG+ V      +R   +A  +G GG++ +GAGV  +    +     +  V   GG++ + AG L  + +   K V +      G D  V A GA++VR    G+P+ V T      P +  ++V G 
Sbjct:   19 KKSLLVLFAALATIGLIAGIVIAFQPEEKHA-SQSPAPADGVVEEASSIETVVPPPSPADKAPIVAEPVEPEEV-STESLPDGPGGSLPGYKVLDG----VAEKSSDLIGGVFGEEAGAASEDFFSTMLKDTSLISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPV---------LRGGTALVELGGRFSAFG-VIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGA-GAIVVR----GSPSAVNTGVAYIAPPVSQYFVNGQ 604          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|553183773|ref|XP_005853964.1| (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >gi|422295099|gb|EKU22398.1| hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 182.57 bits (462), Expect = 5.337e-43
Identity = 156/486 (32.10%), Postives = 230/486 (47.33%), Query Frame = 0
Query:  176 DASWGDYIAVHGCTPDTGVQLRSLVETGSCPVITLTPGV--RYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRG---------VPMAVVDEVYLELRGGVAWIREGGEGV-FTGCLMLVHDDEVGDVLLASDLRVT---ARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQ---GIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGV--VQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIV------ATNPNLFNFYVAGN 635
            D +  D++  + C P  G +L   VE   C ++ L+ G    Y LDE+I V R V ++G P  LP IDA    RAF+V   G L+L+FV+V +G         +  +    V  E+RGG   +  G  G  F G   +   ++   V  A + ++     R+YGG + + AGT+    C+       +   +  ++GG +LVV+GN F TG T TA  LF    G G  +++LGGNAV T   F +  A GV+Q   G G ++FVGGG+ ILTG   +     L F G G   + GGGV + TG+   +   + A+ GAG   A+GGGVMV+TGV  VQ     H      G + F GAG  ++     +   T  +F G GG  Y GAG +       A           GG  +  AG++  +    F    +  + G G    + AGGA++      G+P         ++   + N+YV GN
Sbjct:  103 DVNLKDFVGQNSCWPADGAELLDAVENQGCELVVLSSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLPFTDQVSIGGDVLVVAGNAFFTGCTFTATLLFGNFGGAGFNVAVLGGNAVFT---FCVIQAQGVAQSANGAGQILFVGGGTMILTGLDFRFAAPILFFSGIG-DFFVGGGVMIFTGVTIENTYPILAAYGAGFYLAVGGGVMVETGVTYVQFNCPAHQ--GLTGASIFTGAGVSIHVGVPASFYGTTVLFTGQGGFSYNGAGYSLWLGSPIAIFLATFAFFGLGGLTSQPAGFMVYLGCPAFLPAALVYFAGLGAVMYLGAGGAVI-----GGSPVFAPAFKFYSSPEGVANYYVQGN 577          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585105443|gb|EWM24109.1| (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana])

HSP 1 Score: 176.407 bits (446), Expect = 3.945e-42
Identity = 156/486 (32.10%), Postives = 230/486 (47.33%), Query Frame = 0
Query:  176 DASWGDYIAVHGCTPDTGVQLRSLVETGSCPVITLTPGV--RYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRG---------VPMAVVDEVYLELRGGVAWIREGGEGV-FTGCLMLVHDDEVGDVLLASDLRVT---ARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQ---GIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGV--VQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIV------ATNPNLFNFYVAGN 635
            D +  D++  + C P  G +L   VE   C ++ L+ G    Y LDE+I V R V ++G P  LP IDA    RAF+V   G L+L+FV+V +G         +  +    V  E+RGG   +  G  G  F G   +   ++   V  A + ++     R+YGG + + AGT+    C+       +   +  ++GG +LVV+GN F TG T TA  LF    G G  +++LGGNAV T   F +  A GV+Q   G G ++FVGGG+ ILTG   +     L F G G   + GGGV + TG+   +   + A+ GAG   A+GGGVMV+TGV  VQ     H      G + F GAG  ++     +   T  +F G GG  Y GAG +       A           GG  +  AG++  +    F    +  + G G    + AGGA++      G+P         ++   + N+YV GN
Sbjct:  122 DVNLKDFVGQNSCWPADGAELLDAVENQGCELVVLSSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLPFTDQVSIGGDVLVVAGNAFFTGCTFTATLLFGNFGGAGFNVAVLGGNAVFT---FCVIQAQGVAQSANGAGQILFVGGGTMILTGLDFRFAAPILFFSGIG-DFFVGGGVMIFTGVTIENTYPILAAYGAGFYLAVGGGVMVETGVTYVQFNCPAHQ--GLTGASIFTGAGVSIHVGVPASFYGTTVLFTGQGGFSYNGAGYSLWLGSPIAIFLATFAFFGLGGLTSQPAGFMVYLGCPAFLPAALVYFAGLGAVMYLGAGGAVI-----GGSPVFAPAFKFYSSPEGVANYYVQGN 596          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585109935|gb|EWM27664.1| (hypothetical protein Naga_100125g7 [Nannochloropsis gaditana])

HSP 1 Score: 176.407 bits (446), Expect = 8.222e-41
Identity = 126/461 (27.33%), Postives = 202/461 (43.82%), Query Frame = 0
Query:  176 DASWGDYIAVHG--CTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAG 634
            D +W  +   +G  C      +L   V + +C V+ L  G  Y LD  +HV +   +IG P   PVI+A    RAF V +    D+R +  + G    + +E+     GG  ++  G       CL  +       +  A +      ++GG +L+E G + +  C      PG +      +GG +L++SG   +T        +F    G G  +++LGG+  +T  +   N  F     +G  +F+GGG  + T       + FLSF+GAGF +  G G+ + TG     N   +  AG G+   +G G+ +  G   A  +   +    GV  F GAG +    CV+   + +A +   GG++YLG G A    C  A    + + A  GGD  + AG + +V   F     I V+ GQG +  V AG A +  V ++    I       F+F V G
Sbjct:  164 DDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRF-GGAIYMSIGTRLFAFDCLFTIQPVRESFINSAPEF-----IFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGG 618          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585108528|gb|EWM26475.1| (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana])

HSP 1 Score: 176.022 bits (445), Expect = 9.499e-41
Identity = 138/447 (30.87%), Postives = 214/447 (47.87%), Query Frame = 0
Query:  182 YIAVHGCTPDTGVQLRSLVETGSCPVITLT---PGVRYVLD-EEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAV----------VDEVYLELRGGVAWIREGGEGV-FTGCLML--VHDDEVGDVLLASDLRVTA-RLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLW-TGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALL 609
            ++    C P   V+L+  VE   CP++ LT   P    ++D  EI V R V ++G P  LP IDA +  RAF++   G L+L++V+V +G+ M            +     E++GG   + EG EG  F G + L  + + E+ +  +   + +T  R+YGG + + AGT+R  +CH       +   +   +G  ILV++GN+F+TG T T   LF    G G  I  LGGN V+T  +    A        GM+VF GGG+ I+TG   +     ++F  AGFG + TG GV V TG+       + +S GA + NA+G GV++++G           +A  G+  F+G G   +     +   +     G GG  Y GAG +    C  A    +      GG  A  AG +  V N  F  + ++ + G G    V AG A++
Sbjct:  198 FVGKDTCWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMPFTDQVAIGADILVLAGNVFVTGCTFTNTMLFSNYGGAGWNIVTLGGNTVMTWCTIQWQAIIMSMFVAGMVVFTGGGTLIMTGVDFRFVSAGMNF--AGFGSFGTGAGVMVNTGVTMEQVFAVMSSFGASMYNAVGAGVLIESGATFVQFTGPVYMAMTGMMDFLGTGASSHVGVPCSMSGSTGAMHGQGGFSYNGAGSSVWVGCPVAMFWAVYSFLGTGGVAAQGAGIMIWVGNPVFMPMAVSYFAGLGAIMFVGAGSAVI 642          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585104563|gb|EWM23493.1| (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana])

HSP 1 Score: 159.844 bits (403), Expect = 7.527e-36
Identity = 137/441 (31.07%), Postives = 199/441 (45.12%), Query Frame = 0
Query:  187 GCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVY------------LELRGGVAWIREGGE-GVFTGCLMLVHDDEVGDVLLASDLRV----TARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQG-IGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALL 609
            GC  + G++L   +E  SC ++ L PG  Y L+ EI VRR V+++G P  LP+ID     R+F V   G LDLRFV+ +    +    + Y             E+RGG  +I EG   G FTG ++ + D +V D    S  R       R+YGG + +  G +    C             V  +G  +L + G L  TG T   N +F    GVG F++   G +  T ++F+ N  F +S+  +G    VGGG  I+T  V       LS+ G+G  L   GGV V+TGM       + A  G G    +G GV + TG V          + LG   F+G+G ++ T          A   G GG+ ++GAG A+ T CV      I  +   G   AV AG+LT + + F +   I      G    + AG  +L
Sbjct:  154 GCEVNDGLELTDAIENQSCSIVYLKPGQLYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTG-VIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQLGGVLTFTGCTFFENTVFGIENGVGLFVAQFAGLSTYTFNTFIEN-NFAISENCLGQAFLVGGGVMIMTHSVINEYSAGLSYSGSG-ELNVLGGVLVVTGMNNVEAFALGAVYGVGFEYTVGSGVAIFTGTVFDEYNGLLFFSALGEVNFIGSGVMIATGSPAMEYIAQASENGQGGNTFIGAGYASFTGCVVLEFISIANIFMLGEYIAVDAGFLTWIASPFIEAAAIEYAFQLGSIVYIGAGAMVL 591          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|553186171|ref|XP_005854372.1| (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >gi|422294687|gb|EKU21987.1| hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 152.14 bits (383), Expect = 2.882e-33
Identity = 145/501 (28.94%), Postives = 222/501 (44.31%), Query Frame = 0
Query:  188 CTPDTGVQLRSLVETGSCPVITLT---PGVRYVLDEEIHVRRAVVIIGRPLTLPVIDA---HLIARAFSVEAKGRLDLRFVKVWRGV------PMAV-------------------VDEVYLELRGGVAWIREGGEGV-FTGCLMLV---HDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAGNFFSLNSSTDVVLATRNVF 653
            C P T  +L   V+   C ++ LT   P   Y++ + I V R + I+G P+ LPVIDA   ++  RAF V   G LDL++++V  GV      P++                    V    LE RGG   I +G  G  F G + L      + V + + A+   +  R YGG + +  G+++  +CH       + L + +++GG IL+++G L +T  T T+  +F ++ G G  + ILGG  V T      +     S G G  + VGGG  I+TG   +     L+F G G    T  GV V+TG+   +   +  + GAG   A+G G +V+ GV        +  A  G + FVG+G  +          +   F G GG  Y GAGV+      S            GG  A  AG+ T V +  F    +  + GQG      +GGA++         +    + N  NFYVAG   S N +  +  A+R+ F
Sbjct:  139 CYPQTADELVEAVQELDCSLLFLTNFDPQA-YLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGAGMVVGILGGVGVFTFCVIQESIIANHSSGPGQTILVGGGVQIITGMDFRLVAVVLAFVGFG-DFATAAGVLVMTGVTIENAYGVLFAVGAGFYTAVGSGTLVQIGVSYVQYCGPSFNALAGSSIFVGSGASINVGVPSLFAYSTNTFSGIGGFSYNGAGVSVWVGSPSVNWASTYSFFGLGGTLADSAGFTTFVGSPTFSAYALFYFAGQGGTLWKGSGGAVVALSPVYAPASRQYVSGNADNFYVAGR--SFNDAKGLTYASRSKF 635          
BLAST of EWM26817.1 vs. NCBI_GenBank
Match: gi|585108063|gb|EWM26075.1| (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana])

HSP 1 Score: 141.739 bits (356), Expect = 2.281e-30
Identity = 153/544 (28.12%), Postives = 239/544 (43.93%), Query Frame = 0
Query:  188 CTPDTGVQLRSLVETGSCPVITLTPG--VRYVLDEEIHVRRAVVIIGRPLTLPVIDA---HLIARAFSVEAKGRLDLRFVKVWRGV------PMAV-------------------VDEVYLELRGGVAWIREGGEGV-FTGCLMLV---HDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAGNFFSLNSSTDVVLATRNVFIIWDAPGV--GKRGMSAAGGGR-RREL--DDQGAAEEQDRWREE 692
            C P T  +L   V+   C ++ LT      Y++ + I V R + I+G P+ LPVIDA   ++  RAF V   G LDL++++V  GV      P++                    V    LE RGG   I +G  G  F G + L      + V + + A+   +  R YGG + +  G+++  +CH       + L + +++GG IL+++G L +T  T T+  +F ++ G G  + ILGG  V T      +     S G G  + VGGG  I+TG   +     L+F G G    T  GV V+TG+   +   +  + GAG   A+G G +V+ GV        +  A  G + FVG+G  +          +   F G GG  Y GAGV+      S            GG  A  AG+ T V +  F    +  + GQG      +GGA++         +    + N  NFYVAG   S N +  +  A+R+ F   ++     G R M+     R R+++    +G  EE +  + E
Sbjct:    4 CYPQTADELVEAVQELDCSLLFLTNSDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGAGMVVGILGGVGVFTFCVIQESIIANHSSGPGQTILVGGGVQIITGMDFRLVAVVLAFVGFG-DFATAAGVLVMTGVTIENAYGVLFAVGAGFYTAVGSGTLVQIGVSYVQYCGPSFNALAGSSIFVGSGASINVGVPSLFAYSTNTFSGIGGFSYNGAGVSVWVGSPSVNWASTYSFFGLGGTLADSAGFTTFVGSPTFSAYALFYFAGQGGTLWKGSGGAVVALSPVYAPASRQYVSGNADNFYVAGR--SFNDAKGLTYASRSKFASTNSKNKTNGMRKMTRHKQRRVRKDIVGGSKGKHEENEEIKHE 544          
The following BLAST results are available for this feature:
BLAST of EWM26817.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108908|gb|EWM26817.1|0.000e+0100.00Pectin lyase fold/virulence factor [Nannochloropsi... [more]
gi|585102763|gb|EWM22289.1|7.752e-10629.17Pectin lyase fold/virulence factor [Nannochloropsi... [more]
gi|585107242|gb|EWM25479.1|7.056e-4831.30hypothetical protein Naga_100207g1 [Nannochloropsi... [more]
gi|553183773|ref|XP_005853964.1|5.337e-4332.10hypothetical protein NGA_0462000 [Nannochloropsis ... [more]
gi|585105443|gb|EWM24109.1|3.945e-4232.10hypothetical protein Naga_100286g5 [Nannochloropsi... [more]
gi|585109935|gb|EWM27664.1|8.222e-4127.33hypothetical protein Naga_100125g7 [Nannochloropsi... [more]
gi|585108528|gb|EWM26475.1|9.499e-4130.87hypothetical protein Naga_100045g21 [Nannochlorops... [more]
gi|585104563|gb|EWM23493.1|7.527e-3631.07hypothetical protein Naga_100198g12 [Nannochlorops... [more]
gi|553186171|ref|XP_005854372.1|2.882e-3328.94hypothetical protein NGA_0163600, partial [Nannoch... [more]
gi|585108063|gb|EWM26075.1|2.281e-3028.13hypothetical protein Naga_100278g5 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3878rna3878Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications